RNA–Protein interactions for RNA: YLR405W

DUS4, Transcript of Dihydrouridine synthase, yeastyeast

Gene DUS4, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DUS4YLR405W MTC1P47018 478 aaKnown RBP14.93□□□□□ -0.02
DUS4YLR405W DRS1P32892 752 aaKnown RBP13.83□□□□□ -0.2
DUS4YLR405W FAP1P53971 965 aa13.56□□□□□ -0.24
DUS4YLR405W PRY3P47033 881 aa12.73□□□□□ -0.37
DUS4YLR405W PRI1P10363 409 aa12.65□□□□□ -0.38
DUS4YLR405W AAD16Q02895 342 aa12.6□□□□□ -0.39
DUS4YLR405W ISW2Q08773 1120 aa12.43□□□□□ -0.42
DUS4YLR405W RPG1P38249 964 aaKnown RBP12.27□□□□□ -0.45
DUS4YLR405W DIP2Q12220 943 aaPredicted RBP12.18□□□□□ -0.46
DUS4YLR405W HAA1Q12753 694 aaKnown RBP11.99□□□□□ -0.49
DUS4YLR405W YCK3P39962 524 aa11.96□□□□□ -0.49
DUS4YLR405W TSR3Q12094 313 aaKnown RBP11.92□□□□□ -0.5
DUS4YLR405W RSE1Q04693 1361 aaKnown RBP11.81□□□□□ -0.52
DUS4YLR405W AVT3P36062 692 aa11.7□□□□□ -0.54
DUS4YLR405W MRPL32P25348 183 aa11.51□□□□□ -0.57
DUS4YLR405W BFR2Q06631 534 aaKnown RBP11.45□□□□□ -0.58
DUS4YLR405W RPL17AP05740 184 aaKnown RBP11.41□□□□□ -0.58
DUS4YLR405W RPL17BP46990 184 aaKnown RBP11.41□□□□□ -0.58
DUS4YLR405W REB1P21538 810 aa11.4□□□□□ -0.58
DUS4YLR405W YGL015CP33199 130 aa11.09□□□□□ -0.63
DUS4YLR405W SPT21P35209 758 aa10.91□□□□□ -0.66
DUS4YLR405W CDC27P38042 758 aa10.85□□□□□ -0.67
DUS4YLR405W YKR023WP36119 530 aaKnown RBP10.82□□□□□ -0.68
DUS4YLR405W UBP10P53874 792 aaPredicted RBP10.62□□□□□ -0.71
DUS4YLR405W TFC8Q12308 588 aa10.61□□□□□ -0.71
DUS4YLR405W HOP09932 586 aa10.58□□□□□ -0.72
DUS4YLR405W MAP2P38174 421 aaKnown RBP10.54□□□□□ -0.72
DUS4YLR405W RIM101P33400 625 aa10.53□□□□□ -0.72
DUS4YLR405W DCD1P06773 312 aa10.52□□□□□ -0.73
DUS4YLR405W SGS1P35187 1447 aa10.34□□□□□ -0.75
DUS4YLR405W SCY1P53009 804 aa10.32□□□□□ -0.76
DUS4YLR405W BCH2P36122 765 aa10.26□□□□□ -0.77
DUS4YLR405W SLX5P32828 619 aaKnown RBP10.22□□□□□ -0.77
DUS4YLR405W TIF4632P39936 914 aaKnown RBP10.22□□□□□ -0.77
DUS4YLR405W BUD31P25337 157 aaPredicted RBP10.18□□□□□ -0.78
DUS4YLR405W TGL3P40308 642 aa10.16□□□□□ -0.78
DUS4YLR405W OXP1P28273 1286 aa10.15□□□□□ -0.78
DUS4YLR405W SPA2P23201 1466 aaKnown RBP10.08□□□□□ -0.8
DUS4YLR405W YIL055CP40523 627 aaKnown RBP10.06□□□□□ -0.8
DUS4YLR405W PTP3P40048 928 aa10.03□□□□□ -0.8
DUS4YLR405W SSN2P38931 1420 aa10.02□□□□□ -0.81
DUS4YLR405W TFA1P36100 482 aa10.02□□□□□ -0.81
DUS4YLR405W INO80P53115 1489 aa9.99□□□□□ -0.81
DUS4YLR405W EPS1P40557 701 aa9.99□□□□□ -0.81
DUS4YLR405W BDF1P35817 686 aa9.96□□□□□ -0.82
DUS4YLR405W MON2P48563 1636 aaPredicted RBP9.91□□□□□ -0.82
DUS4YLR405W UBP9P39967 754 aa9.9□□□□□ -0.82
DUS4YLR405W RSM7P47150 247 aa9.89□□□□□ -0.83
DUS4YLR405W BBC1P47068 1157 aa9.85□□□□□ -0.83
DUS4YLR405W YAH1Q12184 172 aaKnown RBP9.83□□□□□ -0.84
DUS4YLR405W AI2P03876 854 aa9.79□□□□□ -0.84
DUS4YLR405W TCB3Q03640 1545 aaKnown RBP9.77□□□□□ -0.84
DUS4YLR405W MST1P07236 462 aa9.71□□□□□ -0.86
DUS4YLR405W SIS1P25294 352 aaKnown RBP9.69□□□□□ -0.86
DUS4YLR405W YOR238WQ08634 303 aa9.69□□□□□ -0.86
DUS4YLR405W NSR1P27476 414 aaKnown RBP RIP-Chip data9.68□□□□□ -0.86 RIP-Chip
DUS4YLR405W YLR271WQ06152 274 aa9.68□□□□□ -0.86
DUS4YLR405W TY1B-DR4Q07793 1604 aa9.62□□□□□ -0.87
DUS4YLR405W YAP5P40574 245 aa9.61□□□□□ -0.87
DUS4YLR405W PSD2P53037 1138 aaKnown RBP9.56□□□□□ -0.88
DUS4YLR405W SSP1P38871 571 aa9.55□□□□□ -0.88
DUS4YLR405W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.54□□□□□ -0.88not detected
DUS4YLR405W YBL029C-AQ3E756 94 aa9.54□□□□□ -0.88
DUS4YLR405W HSL1P34244 1518 aa9.54□□□□□ -0.88
DUS4YLR405W SPT6P23615 1451 aaKnown RBP9.52□□□□□ -0.89
DUS4YLR405W VNX1P42839 908 aa9.45□□□□□ -0.9
DUS4YLR405W MRM1P25270 412 aa9.42□□□□□ -0.9
DUS4YLR405W XRN1P22147 1528 aaKnown RBP9.41□□□□□ -0.9
DUS4YLR405W DNA2P38859 1522 aa9.41□□□□□ -0.9
DUS4YLR405W HIR3P47171 1648 aa9.39□□□□□ -0.91
DUS4YLR405W GTT3P39996 337 aa9.39□□□□□ -0.91
DUS4YLR405W SPP1Q03012 353 aa9.38□□□□□ -0.91
DUS4YLR405W WSC3Q12215 556 aa9.38□□□□□ -0.91
DUS4YLR405W MGA2P40578 1113 aa9.35□□□□□ -0.91
DUS4YLR405W CST9Q06032 482 aa9.31□□□□□ -0.92
DUS4YLR405W SWR1Q05471 1514 aa9.31□□□□□ -0.92
DUS4YLR405W TIF11P38912 153 aaKnown RBP9.29□□□□□ -0.92
DUS4YLR405W PIB1Q06651 286 aa9.29□□□□□ -0.92
DUS4YLR405W REV3P14284 1504 aa9.28□□□□□ -0.92
DUS4YLR405W KOG1P38873 1557 aa9.27□□□□□ -0.93
DUS4YLR405W SKI3P17883 1432 aaKnown RBP9.25□□□□□ -0.93
DUS4YLR405W RTG3P38165 486 aa9.25□□□□□ -0.93
DUS4YLR405W YMR1P47147 688 aaKnown RBP RIP-Chip data9.25□□□□□ -0.93not detected
DUS4YLR405W TAF2P23255 1407 aa9.24□□□□□ -0.93
DUS4YLR405W THO2P53552 1597 aaKnown RBP9.23□□□□□ -0.93
DUS4YLR405W VPS29P38759 282 aa9.22□□□□□ -0.93
DUS4YLR405W DBP1P24784 617 aaKnown RBP9.19□□□□□ -0.94
DUS4YLR405W SIN3P22579 1536 aa9.19□□□□□ -0.94
DUS4YLR405W ULI1P43604 169 aa9.18□□□□□ -0.94
DUS4YLR405W MSB4Q12317 492 aa9.18□□□□□ -0.94
DUS4YLR405W SSK2P53599 1579 aa9.17□□□□□ -0.94
DUS4YLR405W FKH1P40466 484 aa9.15□□□□□ -0.94
DUS4YLR405W AIR2Q12476 344 aaKnown RBP9.15□□□□□ -0.94
DUS4YLR405W EAP1P36041 632 aaKnown RBP9.14□□□□□ -0.95
DUS4YLR405W IOC2Q12072 812 aa9.14□□□□□ -0.95
DUS4YLR405W LDB19Q12502 818 aa9.14□□□□□ -0.95
DUS4YLR405W MMS22Q06164 1454 aa9.14□□□□□ -0.95
DUS4YLR405W YFR006WP43590 535 aa9.13□□□□□ -0.95
DUS4YLR405W STS1P38637 319 aa9.12□□□□□ -0.95
DUS4YLR405W YJL171CP46992 396 aa9.11□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms