RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W MTC1P47018 478 aaKnown RBP13.46□□□□□ -0.25
YLR400WYLR400W DRS1P32892 752 aaKnown RBP12.58□□□□□ -0.4
YLR400WYLR400W FAP1P53971 965 aa12.06□□□□□ -0.48
YLR400WYLR400W PRI1P10363 409 aa11.35□□□□□ -0.59
YLR400WYLR400W PRY3P47033 881 aa11.33□□□□□ -0.6
YLR400WYLR400W AAD16Q02895 342 aa11.27□□□□□ -0.61
YLR400WYLR400W ISW2Q08773 1120 aa11.13□□□□□ -0.63
YLR400WYLR400W RPG1P38249 964 aaKnown RBP11.05□□□□□ -0.64
YLR400WYLR400W DIP2Q12220 943 aaPredicted RBP11.05□□□□□ -0.64
YLR400WYLR400W YCK3P39962 524 aa10.78□□□□□ -0.68
YLR400WYLR400W TSR3Q12094 313 aaKnown RBP10.72□□□□□ -0.69
YLR400WYLR400W AVT3P36062 692 aa10.67□□□□□ -0.7
YLR400WYLR400W RSE1Q04693 1361 aaKnown RBP10.65□□□□□ -0.7
YLR400WYLR400W HAA1Q12753 694 aaKnown RBP10.65□□□□□ -0.7
YLR400WYLR400W BFR2Q06631 534 aaKnown RBP10.46□□□□□ -0.73
YLR400WYLR400W RPL17AP05740 184 aaKnown RBP10.33□□□□□ -0.76
YLR400WYLR400W RPL17BP46990 184 aaKnown RBP10.33□□□□□ -0.76
YLR400WYLR400W MRPL32P25348 183 aa10.3□□□□□ -0.76
YLR400WYLR400W REB1P21538 810 aa10.25□□□□□ -0.77
YLR400WYLR400W YGL015CP33199 130 aa9.88□□□□□ -0.83
YLR400WYLR400W SPT21P35209 758 aa9.88□□□□□ -0.83
YLR400WYLR400W YKR023WP36119 530 aaKnown RBP9.8□□□□□ -0.84
YLR400WYLR400W CDC27P38042 758 aa9.8□□□□□ -0.84
YLR400WYLR400W HOP09932 586 aa9.58□□□□□ -0.88
YLR400WYLR400W RIM101P33400 625 aa9.58□□□□□ -0.88
YLR400WYLR400W TFC8Q12308 588 aa9.58□□□□□ -0.88
YLR400WYLR400W DCD1P06773 312 aa9.53□□□□□ -0.88
YLR400WYLR400W MAP2P38174 421 aaKnown RBP9.49□□□□□ -0.89
YLR400WYLR400W UBP10P53874 792 aaPredicted RBP9.48□□□□□ -0.89
YLR400WYLR400W SCY1P53009 804 aa9.29□□□□□ -0.92
YLR400WYLR400W BCH2P36122 765 aa9.28□□□□□ -0.92
YLR400WYLR400W OXP1P28273 1286 aa9.26□□□□□ -0.93
YLR400WYLR400W TFA1P36100 482 aa9.25□□□□□ -0.93
YLR400WYLR400W SLX5P32828 619 aaKnown RBP9.16□□□□□ -0.94
YLR400WYLR400W TIF4632P39936 914 aaKnown RBP9.1□□□□□ -0.95
YLR400WYLR400W TGL3P40308 642 aa9.1□□□□□ -0.95
YLR400WYLR400W YIL055CP40523 627 aaKnown RBP9.09□□□□□ -0.95
YLR400WYLR400W PTP3P40048 928 aa9.05□□□□□ -0.96
YLR400WYLR400W BUD31P25337 157 aaPredicted RBP9.03□□□□□ -0.96
YLR400WYLR400W EPS1P40557 701 aa9.03□□□□□ -0.96
YLR400WYLR400W BDF1P35817 686 aa9.01□□□□□ -0.97
YLR400WYLR400W RSM7P47150 247 aa8.98□□□□□ -0.97
YLR400WYLR400W YAH1Q12184 172 aaKnown RBP8.95□□□□□ -0.98
YLR400WYLR400W AI2P03876 854 aa8.88□□□□□ -0.99
YLR400WYLR400W BBC1P47068 1157 aa8.86□□□□□ -0.99
YLR400WYLR400W YLR271WQ06152 274 aa8.83□□□□□ -1
YLR400WYLR400W UBP9P39967 754 aa8.78□□□□□ -1
YLR400WYLR400W MST1P07236 462 aa8.74□□□□□ -1.01
YLR400WYLR400W SSP1P38871 571 aa8.71□□□□□ -1.02
YLR400WYLR400W PSD2P53037 1138 aaKnown RBP8.69□□□□□ -1.02
YLR400WYLR400W NSR1P27476 414 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
YLR400WYLR400W YOR238WQ08634 303 aa8.68□□□□□ -1.02
YLR400WYLR400W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
YLR400WYLR400W YAP5P40574 245 aa8.61□□□□□ -1.03
YLR400WYLR400W SIS1P25294 352 aaKnown RBP8.6□□□□□ -1.03
YLR400WYLR400W MRM1P25270 412 aa8.56□□□□□ -1.04
YLR400WYLR400W YBL029C-AQ3E756 94 aa8.54□□□□□ -1.04
YLR400WYLR400W CST9Q06032 482 aa8.51□□□□□ -1.05
YLR400WYLR400W MGA2P40578 1113 aa8.5□□□□□ -1.05
YLR400WYLR400W VNX1P42839 908 aa8.49□□□□□ -1.05
YLR400WYLR400W WSC3Q12215 556 aa8.43□□□□□ -1.06
YLR400WYLR400W PIB1Q06651 286 aa8.41□□□□□ -1.06
YLR400WYLR400W VPS29P38759 282 aa8.4□□□□□ -1.06
YLR400WYLR400W RTG3P38165 486 aa8.39□□□□□ -1.07
YLR400WYLR400W GTT3P39996 337 aa8.39□□□□□ -1.07
YLR400WYLR400W SPP1Q03012 353 aa8.39□□□□□ -1.07
YLR400WYLR400W YMR1P47147 688 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
YLR400WYLR400W TIF11P38912 153 aaKnown RBP8.33□□□□□ -1.08
YLR400WYLR400W DBP1P24784 617 aaKnown RBP8.32□□□□□ -1.08
YLR400WYLR400W RCR1P38212 213 aa8.3□□□□□ -1.08
YLR400WYLR400W YFR006WP43590 535 aa8.29□□□□□ -1.08
YLR400WYLR400W STS1P38637 319 aa8.28□□□□□ -1.08
YLR400WYLR400W ULI1P43604 169 aa8.24□□□□□ -1.09
YLR400WYLR400W IOC2Q12072 812 aa8.24□□□□□ -1.09
YLR400WYLR400W MSB4Q12317 492 aa8.22□□□□□ -1.09
YLR400WYLR400W VMA1P17255 1071 aaKnown RBP8.21□□□□□ -1.1
YLR400WYLR400W YOL036WQ08206 761 aa8.2□□□□□ -1.1
YLR400WYLR400W AIR2Q12476 344 aaKnown RBP8.2□□□□□ -1.1
YLR400WYLR400W SAM3Q08986 587 aa8.19□□□□□ -1.1
YLR400WYLR400W LDB19Q12502 818 aa8.19□□□□□ -1.1
YLR400WYLR400W FKH1P40466 484 aa8.18□□□□□ -1.1
YLR400WYLR400W SET4P42948 560 aa8.18□□□□□ -1.1
YLR400WYLR400W EAP1P36041 632 aaKnown RBP8.17□□□□□ -1.1
YLR400WYLR400W TRP5P00931 707 aaKnown RBP8.13□□□□□ -1.11
YLR400WYLR400W RAM2P29703 316 aa8.09□□□□□ -1.11
YLR400WYLR400W YJL171CP46992 396 aa8.09□□□□□ -1.11
YLR400WYLR400W RTG1P32607 177 aa8.06□□□□□ -1.12
YLR400WYLR400W GYP5Q12344 894 aa8.06□□□□□ -1.12
YLR400WYLR400W YNL035CP53962 389 aaKnown RBP8.04□□□□□ -1.12
YLR400WYLR400W MAK11P20484 414 aaKnown RBP8.03□□□□□ -1.12
YLR400WYLR400W NCR1Q12200 1170 aa8.03□□□□□ -1.12
YLR400WYLR400W BMT6Q12291 365 aa8.01□□□□□ -1.13
YLR400WYLR400W ABP1P15891 592 aaKnown RBP8□□□□□ -1.13
YLR400WYLR400W SEC61P32915 480 aa8□□□□□ -1.13
YLR400WYLR400W DCW1P36091 449 aa7.99□□□□□ -1.13
YLR400WYLR400W MIF2P35201 549 aa7.98□□□□□ -1.13
YLR400WYLR400W DAN4P47179 1161 aa7.98□□□□□ -1.13
YLR400WYLR400W HTA1P04911 132 aaKnown RBP7.97□□□□□ -1.13
YLR400WYLR400W HTA2P04912 132 aa7.97□□□□□ -1.13
YLR400WYLR400W EDS1P38073 919 aa7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms