RNA–Protein interactions for RNA: YLR298C

YHC1, Transcript of Component of the U1 snRNP complex required for pre-mRNA splicing, yeastyeast

Gene YHC1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHC1YLR298C MTC1P47018 478 aaKnown RBP15.2■□□□□ 0.02
YHC1YLR298C DRS1P32892 752 aaKnown RBP13.97□□□□□ -0.17
YHC1YLR298C FAP1P53971 965 aa13.9□□□□□ -0.18
YHC1YLR298C PRY3P47033 881 aa13.08□□□□□ -0.32
YHC1YLR298C PRI1P10363 409 aa12.93□□□□□ -0.34
YHC1YLR298C AAD16Q02895 342 aa12.87□□□□□ -0.35
YHC1YLR298C ISW2Q08773 1120 aa12.62□□□□□ -0.39
YHC1YLR298C RPG1P38249 964 aaKnown RBP12.51□□□□□ -0.41
YHC1YLR298C YCK3P39962 524 aa12.4□□□□□ -0.42
YHC1YLR298C DIP2Q12220 943 aaPredicted RBP12.32□□□□□ -0.44
YHC1YLR298C HAA1Q12753 694 aaKnown RBP12.24□□□□□ -0.45
YHC1YLR298C TSR3Q12094 313 aaKnown RBP12.21□□□□□ -0.45
YHC1YLR298C RSE1Q04693 1361 aaKnown RBP11.97□□□□□ -0.49
YHC1YLR298C AVT3P36062 692 aa11.84□□□□□ -0.51
YHC1YLR298C MRPL32P25348 183 aa11.71□□□□□ -0.53
YHC1YLR298C RPL17AP05740 184 aaKnown RBP11.61□□□□□ -0.55
YHC1YLR298C RPL17BP46990 184 aaKnown RBP11.61□□□□□ -0.55
YHC1YLR298C REB1P21538 810 aa11.57□□□□□ -0.56
YHC1YLR298C BFR2Q06631 534 aaKnown RBP11.51□□□□□ -0.57
YHC1YLR298C YGL015CP33199 130 aa11.28□□□□□ -0.6
YHC1YLR298C SPT21P35209 758 aa11.13□□□□□ -0.63
YHC1YLR298C CDC27P38042 758 aa11.13□□□□□ -0.63
YHC1YLR298C YKR023WP36119 530 aaKnown RBP11.05□□□□□ -0.64
YHC1YLR298C UBP10P53874 792 aaPredicted RBP10.83□□□□□ -0.68
YHC1YLR298C HOP09932 586 aa10.81□□□□□ -0.68
YHC1YLR298C TFC8Q12308 588 aa10.81□□□□□ -0.68
YHC1YLR298C MAP2P38174 421 aaKnown RBP10.8□□□□□ -0.68
YHC1YLR298C DCD1P06773 312 aa10.79□□□□□ -0.68
YHC1YLR298C RIM101P33400 625 aa10.67□□□□□ -0.7
YHC1YLR298C SCY1P53009 804 aa10.54□□□□□ -0.72
YHC1YLR298C BUD31P25337 157 aaPredicted RBP10.46□□□□□ -0.73
YHC1YLR298C BCH2P36122 765 aa10.44□□□□□ -0.74
YHC1YLR298C SLX5P32828 619 aaKnown RBP10.41□□□□□ -0.74
YHC1YLR298C TIF4632P39936 914 aaKnown RBP10.35□□□□□ -0.75
YHC1YLR298C OXP1P28273 1286 aa10.31□□□□□ -0.76
YHC1YLR298C TGL3P40308 642 aa10.31□□□□□ -0.76
YHC1YLR298C EPS1P40557 701 aa10.18□□□□□ -0.78
YHC1YLR298C PTP3P40048 928 aa10.15□□□□□ -0.78
YHC1YLR298C BDF1P35817 686 aa10.14□□□□□ -0.79
YHC1YLR298C YIL055CP40523 627 aaKnown RBP10.11□□□□□ -0.79
YHC1YLR298C UBP9P39967 754 aa10.05□□□□□ -0.8
YHC1YLR298C RSM7P47150 247 aa9.99□□□□□ -0.81
YHC1YLR298C YAH1Q12184 172 aaKnown RBP9.97□□□□□ -0.81
YHC1YLR298C TFA1P36100 482 aa9.95□□□□□ -0.82
YHC1YLR298C AI2P03876 854 aa9.93□□□□□ -0.82
YHC1YLR298C BBC1P47068 1157 aa9.93□□□□□ -0.82
YHC1YLR298C SIS1P25294 352 aaKnown RBP9.92□□□□□ -0.82
YHC1YLR298C MST1P07236 462 aa9.87□□□□□ -0.83
YHC1YLR298C NSR1P27476 414 aaKnown RBP RIP-Chip data9.82□□□□□ -0.84not detected
YHC1YLR298C YOR238WQ08634 303 aa9.82□□□□□ -0.84
YHC1YLR298C YLR271WQ06152 274 aa9.8□□□□□ -0.84
YHC1YLR298C YBL029C-AQ3E756 94 aa9.77□□□□□ -0.85
YHC1YLR298C YAP5P40574 245 aa9.74□□□□□ -0.85
YHC1YLR298C PSD2P53037 1138 aaKnown RBP9.69□□□□□ -0.86
YHC1YLR298C VNX1P42839 908 aa9.64□□□□□ -0.87
YHC1YLR298C SSP1P38871 571 aa9.6□□□□□ -0.87
YHC1YLR298C WSC3Q12215 556 aa9.58□□□□□ -0.88
YHC1YLR298C MRM1P25270 412 aa9.56□□□□□ -0.88
YHC1YLR298C SPP1Q03012 353 aa9.55□□□□□ -0.88
YHC1YLR298C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.55□□□□□ -0.88not detected
YHC1YLR298C GTT3P39996 337 aa9.52□□□□□ -0.89
YHC1YLR298C PIB1Q06651 286 aa9.5□□□□□ -0.89
YHC1YLR298C TIF11P38912 153 aaKnown RBP9.45□□□□□ -0.9
YHC1YLR298C CST9Q06032 482 aa9.45□□□□□ -0.9
YHC1YLR298C MGA2P40578 1113 aa9.4□□□□□ -0.9
YHC1YLR298C FKH1P40466 484 aa9.37□□□□□ -0.91
YHC1YLR298C VPS29P38759 282 aa9.36□□□□□ -0.91
YHC1YLR298C AIR2Q12476 344 aaKnown RBP9.36□□□□□ -0.91
YHC1YLR298C YMR1P47147 688 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91not detected
YHC1YLR298C RTG3P38165 486 aa9.32□□□□□ -0.92
YHC1YLR298C ULI1P43604 169 aa9.32□□□□□ -0.92
YHC1YLR298C LDB19Q12502 818 aa9.32□□□□□ -0.92
YHC1YLR298C DBP1P24784 617 aaKnown RBP9.31□□□□□ -0.92
YHC1YLR298C IOC2Q12072 812 aa9.31□□□□□ -0.92
YHC1YLR298C YFR006WP43590 535 aa9.29□□□□□ -0.92
YHC1YLR298C MSB4Q12317 492 aa9.29□□□□□ -0.92
YHC1YLR298C STS1P38637 319 aa9.28□□□□□ -0.92
YHC1YLR298C YOL036WQ08206 761 aa9.27□□□□□ -0.93
YHC1YLR298C RCR1P38212 213 aa9.26□□□□□ -0.93
YHC1YLR298C SET4P42948 560 aa9.24□□□□□ -0.93
YHC1YLR298C YJL171CP46992 396 aa9.24□□□□□ -0.93
YHC1YLR298C VMA1P17255 1071 aaKnown RBP9.23□□□□□ -0.93
YHC1YLR298C EAP1P36041 632 aaKnown RBP9.22□□□□□ -0.93
YHC1YLR298C TRP5P00931 707 aaKnown RBP9.17□□□□□ -0.94
YHC1YLR298C SAM3Q08986 587 aa9.17□□□□□ -0.94
YHC1YLR298C RTG1P32607 177 aa9.14□□□□□ -0.95
YHC1YLR298C BMT6Q12291 365 aa9.13□□□□□ -0.95
YHC1YLR298C YNL035CP53962 389 aaKnown RBP9.07□□□□□ -0.96
YHC1YLR298C NCR1Q12200 1170 aa9.05□□□□□ -0.96
YHC1YLR298C SEC61P32915 480 aa9.04□□□□□ -0.96
YHC1YLR298C GYP5Q12344 894 aa9.02□□□□□ -0.97
YHC1YLR298C ABP1P15891 592 aaKnown RBP9□□□□□ -0.97
YHC1YLR298C DAN4P47179 1161 aa8.98□□□□□ -0.97
YHC1YLR298C DCW1P36091 449 aa8.96□□□□□ -0.98
YHC1YLR298C HTA1P04911 132 aaKnown RBP8.95□□□□□ -0.98
YHC1YLR298C HTA2P04912 132 aa8.95□□□□□ -0.98
YHC1YLR298C JIP4Q03361 876 aa8.95□□□□□ -0.98
YHC1YLR298C RAM2P29703 316 aa8.93□□□□□ -0.98
YHC1YLR298C TFG1P41895 735 aaPredicted RBP8.91□□□□□ -0.98
YHC1YLR298C MAK11P20484 414 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms