RNA–Protein interactions for RNA: YLR265C

NEJ1, Transcript of Protein involved in regulation of nonhomologous end joining, yeastyeast

Gene NEJ1, Length 1,029 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEJ1YLR265C MTC1P47018 478 aaKnown RBP19.4■□□□□ 0.7
NEJ1YLR265C FAP1P53971 965 aa18.34■□□□□ 0.53
NEJ1YLR265C DRS1P32892 752 aaKnown RBP18.32■□□□□ 0.52
NEJ1YLR265C PRY3P47033 881 aa17.26■□□□□ 0.35
NEJ1YLR265C PRI1P10363 409 aa16.81■□□□□ 0.28
NEJ1YLR265C AAD16Q02895 342 aa16.81■□□□□ 0.28
NEJ1YLR265C ISW2Q08773 1120 aa16.28■□□□□ 0.2
NEJ1YLR265C YCK3P39962 524 aa16.25■□□□□ 0.19
NEJ1YLR265C HAA1Q12753 694 aaKnown RBP16.19■□□□□ 0.18
NEJ1YLR265C RPG1P38249 964 aaKnown RBP16.11■□□□□ 0.17
NEJ1YLR265C DIP2Q12220 943 aaPredicted RBP15.98■□□□□ 0.15
NEJ1YLR265C TSR3Q12094 313 aaKnown RBP15.82■□□□□ 0.12
NEJ1YLR265C AVT3P36062 692 aa15.51■□□□□ 0.07
NEJ1YLR265C BFR2Q06631 534 aaKnown RBP15.36■□□□□ 0.05
NEJ1YLR265C RSE1Q04693 1361 aaKnown RBP15.35■□□□□ 0.05
NEJ1YLR265C MRPL32P25348 183 aa15.24■□□□□ 0.03
NEJ1YLR265C RPL17AP05740 184 aaKnown RBP14.85□□□□□ -0.03
NEJ1YLR265C YGL015CP33199 130 aa14.85□□□□□ -0.03
NEJ1YLR265C RPL17BP46990 184 aaKnown RBP14.85□□□□□ -0.03
NEJ1YLR265C REB1P21538 810 aa14.77□□□□□ -0.05
NEJ1YLR265C CDC27P38042 758 aa14.3□□□□□ -0.12
NEJ1YLR265C SPT21P35209 758 aa14.24□□□□□ -0.13
NEJ1YLR265C YKR023WP36119 530 aaKnown RBP14.08□□□□□ -0.16
NEJ1YLR265C UBP10P53874 792 aaPredicted RBP14.04□□□□□ -0.16
NEJ1YLR265C MAP2P38174 421 aaKnown RBP13.96□□□□□ -0.17
NEJ1YLR265C BUD31P25337 157 aaPredicted RBP13.95□□□□□ -0.18
NEJ1YLR265C RIM101P33400 625 aa13.85□□□□□ -0.19
NEJ1YLR265C TFC8Q12308 588 aa13.8□□□□□ -0.2
NEJ1YLR265C HOP09932 586 aa13.78□□□□□ -0.2
NEJ1YLR265C TFA1P36100 482 aa13.77□□□□□ -0.21
NEJ1YLR265C DCD1P06773 312 aa13.72□□□□□ -0.21
NEJ1YLR265C SCY1P53009 804 aa13.54□□□□□ -0.24
NEJ1YLR265C TIF4632P39936 914 aaKnown RBP13.49□□□□□ -0.25
NEJ1YLR265C TGL3P40308 642 aa13.44□□□□□ -0.26
NEJ1YLR265C SLX5P32828 619 aaKnown RBP13.43□□□□□ -0.26
NEJ1YLR265C OXP1P28273 1286 aa13.4□□□□□ -0.26
NEJ1YLR265C BCH2P36122 765 aa13.31□□□□□ -0.28
NEJ1YLR265C UBP9P39967 754 aa13.28□□□□□ -0.28
NEJ1YLR265C SIS1P25294 352 aaKnown RBP13.21□□□□□ -0.29
NEJ1YLR265C YIL055CP40523 627 aaKnown RBP13.15□□□□□ -0.3
NEJ1YLR265C PTP3P40048 928 aa13.1□□□□□ -0.31
NEJ1YLR265C YAH1Q12184 172 aaKnown RBP13□□□□□ -0.33
NEJ1YLR265C EPS1P40557 701 aa12.98□□□□□ -0.33
NEJ1YLR265C RSM7P47150 247 aa12.98□□□□□ -0.33
NEJ1YLR265C BDF1P35817 686 aa12.94□□□□□ -0.34
NEJ1YLR265C AI2P03876 854 aa12.83□□□□□ -0.36
NEJ1YLR265C YLR271WQ06152 274 aa12.83□□□□□ -0.36
NEJ1YLR265C MST1P07236 462 aa12.78□□□□□ -0.36
NEJ1YLR265C BBC1P47068 1157 aa12.78□□□□□ -0.36
NEJ1YLR265C SSP1P38871 571 aa12.72□□□□□ -0.37
NEJ1YLR265C YOR238WQ08634 303 aa12.7□□□□□ -0.38
NEJ1YLR265C YBL029C-AQ3E756 94 aa12.66□□□□□ -0.38
NEJ1YLR265C NSR1P27476 414 aaKnown RBP RIP-Chip data12.62□□□□□ -0.39not detected
NEJ1YLR265C PSD2P53037 1138 aaKnown RBP12.59□□□□□ -0.39
NEJ1YLR265C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.58□□□□□ -0.4not detected
NEJ1YLR265C VNX1P42839 908 aa12.52□□□□□ -0.41
NEJ1YLR265C YAP5P40574 245 aa12.5□□□□□ -0.41
NEJ1YLR265C SPP1Q03012 353 aa12.41□□□□□ -0.42
NEJ1YLR265C MRM1P25270 412 aa12.38□□□□□ -0.43
NEJ1YLR265C MGA2P40578 1113 aa12.38□□□□□ -0.43
NEJ1YLR265C CST9Q06032 482 aa12.38□□□□□ -0.43
NEJ1YLR265C WSC3Q12215 556 aa12.36□□□□□ -0.43
NEJ1YLR265C TIF11P38912 153 aaKnown RBP12.25□□□□□ -0.45
NEJ1YLR265C GTT3P39996 337 aa12.25□□□□□ -0.45
NEJ1YLR265C AIR2Q12476 344 aaKnown RBP12.2□□□□□ -0.46
NEJ1YLR265C FKH1P40466 484 aa12.18□□□□□ -0.46
NEJ1YLR265C YJL171CP46992 396 aa12.16□□□□□ -0.46
NEJ1YLR265C RTG3P38165 486 aa12.14□□□□□ -0.47
NEJ1YLR265C VPS29P38759 282 aa12.14□□□□□ -0.47
NEJ1YLR265C PIB1Q06651 286 aa12.11□□□□□ -0.47
NEJ1YLR265C RCR1P38212 213 aa12.07□□□□□ -0.48
NEJ1YLR265C ULI1P43604 169 aa12.05□□□□□ -0.48
NEJ1YLR265C YMR1P47147 688 aaKnown RBP RIP-Chip data12.05□□□□□ -0.48not detected
NEJ1YLR265C LDB19Q12502 818 aa12.05□□□□□ -0.48
NEJ1YLR265C IOC2Q12072 812 aa12.02□□□□□ -0.49
NEJ1YLR265C DBP1P24784 617 aaKnown RBP12□□□□□ -0.49
NEJ1YLR265C YFR006WP43590 535 aa11.98□□□□□ -0.49
NEJ1YLR265C STS1P38637 319 aa11.96□□□□□ -0.49
NEJ1YLR265C MSB4Q12317 492 aa11.95□□□□□ -0.5
NEJ1YLR265C BMT6Q12291 365 aa11.94□□□□□ -0.5
NEJ1YLR265C EAP1P36041 632 aaKnown RBP11.9□□□□□ -0.5
NEJ1YLR265C VMA1P17255 1071 aaKnown RBP11.84□□□□□ -0.51
NEJ1YLR265C YOL036WQ08206 761 aa11.82□□□□□ -0.52
NEJ1YLR265C RAM2P29703 316 aa11.8□□□□□ -0.52
NEJ1YLR265C SET4P42948 560 aa11.79□□□□□ -0.52
NEJ1YLR265C RTG1P32607 177 aa11.78□□□□□ -0.52
NEJ1YLR265C SAM3Q08986 587 aa11.77□□□□□ -0.53
NEJ1YLR265C TRP5P00931 707 aaKnown RBP11.76□□□□□ -0.53
NEJ1YLR265C NCR1Q12200 1170 aa11.73□□□□□ -0.53
NEJ1YLR265C YNL035CP53962 389 aaKnown RBP11.7□□□□□ -0.54
NEJ1YLR265C MAK11P20484 414 aaKnown RBP11.68□□□□□ -0.54
NEJ1YLR265C SEC61P32915 480 aa11.67□□□□□ -0.54
NEJ1YLR265C GYP5Q12344 894 aa11.61□□□□□ -0.55
NEJ1YLR265C MIF2P35201 549 aa11.58□□□□□ -0.56
NEJ1YLR265C EDS1P38073 919 aa11.57□□□□□ -0.56
NEJ1YLR265C TFG1P41895 735 aaPredicted RBP11.55□□□□□ -0.56
NEJ1YLR265C COQ8P27697 501 aa11.54□□□□□ -0.56
NEJ1YLR265C ABP1P15891 592 aaKnown RBP11.51□□□□□ -0.57
NEJ1YLR265C PTC3P34221 468 aaKnown RBP11.51□□□□□ -0.57
NEJ1YLR265C DCW1P36091 449 aa11.51□□□□□ -0.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms