RNA–Protein interactions for RNA: YLR254C

NDL1, Transcript of Homolog of nuclear distribution factor NudE, yeastyeast

Gene NDL1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDL1YLR254C MTC1P47018 478 aaKnown RBP18.02■□□□□ 0.48
NDL1YLR254C FAP1P53971 965 aa16.67■□□□□ 0.26
NDL1YLR254C DRS1P32892 752 aaKnown RBP16.59■□□□□ 0.25
NDL1YLR254C PRY3P47033 881 aa15.64■□□□□ 0.09
NDL1YLR254C PRI1P10363 409 aa15.35■□□□□ 0.05
NDL1YLR254C AAD16Q02895 342 aa15.32■□□□□ 0.04
NDL1YLR254C ISW2Q08773 1120 aa15.04■□□□□ -0
NDL1YLR254C RPG1P38249 964 aaKnown RBP14.91□□□□□ -0.02
NDL1YLR254C YCK3P39962 524 aa14.65□□□□□ -0.06
NDL1YLR254C DIP2Q12220 943 aaPredicted RBP14.65□□□□□ -0.06
NDL1YLR254C HAA1Q12753 694 aaKnown RBP14.6□□□□□ -0.07
NDL1YLR254C TSR3Q12094 313 aaKnown RBP14.56□□□□□ -0.08
NDL1YLR254C RSE1Q04693 1361 aaKnown RBP14.22□□□□□ -0.13
NDL1YLR254C MRPL32P25348 183 aa13.98□□□□□ -0.17
NDL1YLR254C AVT3P36062 692 aa13.96□□□□□ -0.17
NDL1YLR254C RPL17AP05740 184 aaKnown RBP13.82□□□□□ -0.2
NDL1YLR254C RPL17BP46990 184 aaKnown RBP13.82□□□□□ -0.2
NDL1YLR254C REB1P21538 810 aa13.81□□□□□ -0.2
NDL1YLR254C BFR2Q06631 534 aaKnown RBP13.65□□□□□ -0.22
NDL1YLR254C YGL015CP33199 130 aa13.47□□□□□ -0.25
NDL1YLR254C CDC27P38042 758 aa13.19□□□□□ -0.3
NDL1YLR254C SPT21P35209 758 aa13.1□□□□□ -0.31
NDL1YLR254C YKR023WP36119 530 aaKnown RBP13.07□□□□□ -0.32
NDL1YLR254C HOP09932 586 aa12.87□□□□□ -0.35
NDL1YLR254C DCD1P06773 312 aa12.83□□□□□ -0.36
NDL1YLR254C MAP2P38174 421 aaKnown RBP12.83□□□□□ -0.36
NDL1YLR254C UBP10P53874 792 aaPredicted RBP12.81□□□□□ -0.36
NDL1YLR254C TFC8Q12308 588 aa12.81□□□□□ -0.36
NDL1YLR254C RIM101P33400 625 aa12.62□□□□□ -0.39
NDL1YLR254C SCY1P53009 804 aa12.54□□□□□ -0.4
NDL1YLR254C BUD31P25337 157 aaPredicted RBP12.43□□□□□ -0.42
NDL1YLR254C BCH2P36122 765 aa12.4□□□□□ -0.42
NDL1YLR254C SLX5P32828 619 aaKnown RBP12.38□□□□□ -0.43
NDL1YLR254C TIF4632P39936 914 aaKnown RBP12.35□□□□□ -0.43
NDL1YLR254C TGL3P40308 642 aa12.27□□□□□ -0.45
NDL1YLR254C OXP1P28273 1286 aa12.2□□□□□ -0.46
NDL1YLR254C YIL055CP40523 627 aaKnown RBP12.1□□□□□ -0.47
NDL1YLR254C PTP3P40048 928 aa12.09□□□□□ -0.47
NDL1YLR254C EPS1P40557 701 aa12.07□□□□□ -0.48
NDL1YLR254C BDF1P35817 686 aa12.02□□□□□ -0.49
NDL1YLR254C UBP9P39967 754 aa12.02□□□□□ -0.49
NDL1YLR254C SIS1P25294 352 aaKnown RBP11.89□□□□□ -0.51
NDL1YLR254C YAH1Q12184 172 aaKnown RBP11.89□□□□□ -0.51
NDL1YLR254C RSM7P47150 247 aa11.86□□□□□ -0.51
NDL1YLR254C BBC1P47068 1157 aa11.82□□□□□ -0.52
NDL1YLR254C AI2P03876 854 aa11.78□□□□□ -0.52
NDL1YLR254C TFA1P36100 482 aa11.77□□□□□ -0.53
NDL1YLR254C YOR238WQ08634 303 aa11.7□□□□□ -0.54
NDL1YLR254C MST1P07236 462 aa11.67□□□□□ -0.54
NDL1YLR254C YBL029C-AQ3E756 94 aa11.61□□□□□ -0.55
NDL1YLR254C YLR271WQ06152 274 aa11.6□□□□□ -0.55
NDL1YLR254C NSR1P27476 414 aaKnown RBP RIP-Chip data11.56□□□□□ -0.56not detected
NDL1YLR254C YAP5P40574 245 aa11.56□□□□□ -0.56
NDL1YLR254C VNX1P42839 908 aa11.46□□□□□ -0.57
NDL1YLR254C WSC3Q12215 556 aa11.44□□□□□ -0.58
NDL1YLR254C PSD2P53037 1138 aaKnown RBP11.42□□□□□ -0.58
NDL1YLR254C SSP1P38871 571 aa11.39□□□□□ -0.59
NDL1YLR254C SPP1Q03012 353 aa11.38□□□□□ -0.59
NDL1YLR254C MRM1P25270 412 aa11.36□□□□□ -0.59
NDL1YLR254C GTT3P39996 337 aa11.36□□□□□ -0.59
NDL1YLR254C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.36□□□□□ -0.59not detected
NDL1YLR254C PIB1Q06651 286 aa11.33□□□□□ -0.6
NDL1YLR254C TIF11P38912 153 aaKnown RBP11.23□□□□□ -0.61
NDL1YLR254C CST9Q06032 482 aa11.19□□□□□ -0.62
NDL1YLR254C MGA2P40578 1113 aa11.13□□□□□ -0.63
NDL1YLR254C ULI1P43604 169 aa11.11□□□□□ -0.63
NDL1YLR254C RTG3P38165 486 aa11.09□□□□□ -0.63
NDL1YLR254C YJL171CP46992 396 aa11.09□□□□□ -0.63
NDL1YLR254C AIR2Q12476 344 aaKnown RBP11.09□□□□□ -0.63
NDL1YLR254C YMR1P47147 688 aaKnown RBP RIP-Chip data11.08□□□□□ -0.64not detected
NDL1YLR254C LDB19Q12502 818 aa11.08□□□□□ -0.64
NDL1YLR254C VPS29P38759 282 aa11.07□□□□□ -0.64
NDL1YLR254C DBP1P24784 617 aaKnown RBP11.06□□□□□ -0.64
NDL1YLR254C FKH1P40466 484 aa11.06□□□□□ -0.64
NDL1YLR254C YFR006WP43590 535 aa11.05□□□□□ -0.64
NDL1YLR254C IOC2Q12072 812 aa11.03□□□□□ -0.64
NDL1YLR254C SET4P42948 560 aa11□□□□□ -0.65
NDL1YLR254C MSB4Q12317 492 aa11□□□□□ -0.65
NDL1YLR254C EAP1P36041 632 aaKnown RBP10.97□□□□□ -0.65
NDL1YLR254C YOL036WQ08206 761 aa10.97□□□□□ -0.65
NDL1YLR254C STS1P38637 319 aa10.96□□□□□ -0.65
NDL1YLR254C RCR1P38212 213 aa10.94□□□□□ -0.66
NDL1YLR254C VMA1P17255 1071 aaKnown RBP10.92□□□□□ -0.66
NDL1YLR254C TRP5P00931 707 aaKnown RBP10.9□□□□□ -0.66
NDL1YLR254C BMT6Q12291 365 aa10.89□□□□□ -0.67
NDL1YLR254C RTG1P32607 177 aa10.86□□□□□ -0.67
NDL1YLR254C SAM3Q08986 587 aa10.83□□□□□ -0.68
NDL1YLR254C NCR1Q12200 1170 aa10.82□□□□□ -0.68
NDL1YLR254C YNL035CP53962 389 aaKnown RBP10.78□□□□□ -0.68
NDL1YLR254C GYP5Q12344 894 aa10.74□□□□□ -0.69
NDL1YLR254C SEC61P32915 480 aa10.73□□□□□ -0.69
NDL1YLR254C TFG1P41895 735 aaPredicted RBP10.69□□□□□ -0.7
NDL1YLR254C DCW1P36091 449 aa10.68□□□□□ -0.7
NDL1YLR254C ABP1P15891 592 aaKnown RBP10.65□□□□□ -0.7
NDL1YLR254C HTA1P04911 132 aaKnown RBP10.64□□□□□ -0.71
NDL1YLR254C HTA2P04912 132 aa10.64□□□□□ -0.71
NDL1YLR254C JIP4Q03361 876 aa10.63□□□□□ -0.71
NDL1YLR254C DAN4P47179 1161 aa10.61□□□□□ -0.71
NDL1YLR254C SAP30P38429 201 aa10.58□□□□□ -0.72
NDL1YLR254C MIF2P35201 549 aa10.57□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms