RNA–Protein interactions for RNA: YLR192C

HCR1, Transcript of eIF3j component of translation initiation factor 3 (eIF3), yeastyeast

Gene HCR1, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCR1YLR192C MTC1P47018 478 aaKnown RBP16.45■□□□□ 0.22
HCR1YLR192C DRS1P32892 752 aaKnown RBP16.12■□□□□ 0.17
HCR1YLR192C FAP1P53971 965 aa13.91□□□□□ -0.18
HCR1YLR192C DIP2Q12220 943 aaPredicted RBP13.87□□□□□ -0.19
HCR1YLR192C BFR2Q06631 534 aaKnown RBP13.75□□□□□ -0.21
HCR1YLR192C AVT3P36062 692 aa13.6□□□□□ -0.23
HCR1YLR192C PRI1P10363 409 aa13.44□□□□□ -0.26
HCR1YLR192C ISW2Q08773 1120 aa13.42□□□□□ -0.26
HCR1YLR192C RPG1P38249 964 aaKnown RBP13.31□□□□□ -0.28
HCR1YLR192C AAD16Q02895 342 aa13.24□□□□□ -0.29
HCR1YLR192C RSE1Q04693 1361 aaKnown RBP13.17□□□□□ -0.3
HCR1YLR192C PRY3P47033 881 aa13.05□□□□□ -0.32
HCR1YLR192C TSR3Q12094 313 aaKnown RBP12.77□□□□□ -0.37
HCR1YLR192C RPL17AP05740 184 aaKnown RBP12.72□□□□□ -0.37
HCR1YLR192C RPL17BP46990 184 aaKnown RBP12.72□□□□□ -0.37
HCR1YLR192C TFA1P36100 482 aa12.69□□□□□ -0.38
HCR1YLR192C INO80P53115 1489 aa12.61□□□□□ -0.39
HCR1YLR192C MON2P48563 1636 aaPredicted RBP12.59□□□□□ -0.39
HCR1YLR192C REB1P21538 810 aa12.56□□□□□ -0.4
HCR1YLR192C YCK3P39962 524 aa12.45□□□□□ -0.42
HCR1YLR192C HAA1Q12753 694 aaKnown RBP12.26□□□□□ -0.45
HCR1YLR192C SPT21P35209 758 aa12.25□□□□□ -0.45
HCR1YLR192C MRPL32P25348 183 aa12.21□□□□□ -0.45
HCR1YLR192C RIM101P33400 625 aa12□□□□□ -0.49
HCR1YLR192C DNA2P38859 1522 aa11.98□□□□□ -0.49
HCR1YLR192C YKR023WP36119 530 aaKnown RBP11.96□□□□□ -0.49
HCR1YLR192C CDC27P38042 758 aa11.81□□□□□ -0.52
HCR1YLR192C HOP09932 586 aa11.71□□□□□ -0.53
HCR1YLR192C TFC8Q12308 588 aa11.7□□□□□ -0.54
HCR1YLR192C DCD1P06773 312 aa11.65□□□□□ -0.54
HCR1YLR192C OXP1P28273 1286 aa11.65□□□□□ -0.54
HCR1YLR192C KOG1P38873 1557 aa11.62□□□□□ -0.55
HCR1YLR192C SPA2P23201 1466 aaKnown RBP11.52□□□□□ -0.56
HCR1YLR192C YGL015CP33199 130 aa11.48□□□□□ -0.57
HCR1YLR192C SWR1Q05471 1514 aa11.43□□□□□ -0.58
HCR1YLR192C YIL055CP40523 627 aaKnown RBP11.39□□□□□ -0.59
HCR1YLR192C YAH1Q12184 172 aaKnown RBP11.38□□□□□ -0.59
HCR1YLR192C PTP3P40048 928 aa11.36□□□□□ -0.59
HCR1YLR192C BCH2P36122 765 aa11.35□□□□□ -0.59
HCR1YLR192C MAP2P38174 421 aaKnown RBP11.33□□□□□ -0.6
HCR1YLR192C UBP10P53874 792 aaPredicted RBP11.29□□□□□ -0.6
HCR1YLR192C SSP1P38871 571 aa11.26□□□□□ -0.61
HCR1YLR192C RSM7P47150 247 aa11.26□□□□□ -0.61
HCR1YLR192C YLR271WQ06152 274 aa11.24□□□□□ -0.61
HCR1YLR192C MIF2P35201 549 aa11.23□□□□□ -0.61
HCR1YLR192C SCY1P53009 804 aa11.22□□□□□ -0.61
HCR1YLR192C EPS1P40557 701 aa11.11□□□□□ -0.63
HCR1YLR192C AI2P03876 854 aa11.09□□□□□ -0.63
HCR1YLR192C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.06□□□□□ -0.64not detected
HCR1YLR192C BDF1P35817 686 aa11.05□□□□□ -0.64
HCR1YLR192C SLX5P32828 619 aaKnown RBP11.01□□□□□ -0.65
HCR1YLR192C BBC1P47068 1157 aa10.99□□□□□ -0.65
HCR1YLR192C PSD2P53037 1138 aaKnown RBP10.97□□□□□ -0.65
HCR1YLR192C MGA2P40578 1113 aa10.89□□□□□ -0.67
HCR1YLR192C CST9Q06032 482 aa10.89□□□□□ -0.67
HCR1YLR192C TIF4632P39936 914 aaKnown RBP10.8□□□□□ -0.68
HCR1YLR192C TGL3P40308 642 aa10.77□□□□□ -0.69
HCR1YLR192C MRM1P25270 412 aa10.74□□□□□ -0.69
HCR1YLR192C YFR006WP43590 535 aa10.74□□□□□ -0.69
HCR1YLR192C TY1B-DR4Q07793 1604 aa10.72□□□□□ -0.69
HCR1YLR192C TCB3Q03640 1545 aaKnown RBP10.59□□□□□ -0.71
HCR1YLR192C RCR1P38212 213 aa10.56□□□□□ -0.72
HCR1YLR192C RTG3P38165 486 aa10.54□□□□□ -0.72
HCR1YLR192C NSR1P27476 414 aaKnown RBP RIP-Chip data10.51□□□□□ -0.73not detected
HCR1YLR192C VPS29P38759 282 aa10.51□□□□□ -0.73
HCR1YLR192C ECM5Q03214 1411 aa10.45□□□□□ -0.74
HCR1YLR192C YAP5P40574 245 aa10.45□□□□□ -0.74
HCR1YLR192C MST1P07236 462 aa10.43□□□□□ -0.74
HCR1YLR192C RAM2P29703 316 aa10.43□□□□□ -0.74
HCR1YLR192C YOR238WQ08634 303 aa10.43□□□□□ -0.74
HCR1YLR192C REV3P14284 1504 aa10.42□□□□□ -0.74
HCR1YLR192C YMR1P47147 688 aaKnown RBP RIP-Chip data10.4□□□□□ -0.74not detected
HCR1YLR192C STS1P38637 319 aa10.37□□□□□ -0.75
HCR1YLR192C PIB1Q06651 286 aa10.37□□□□□ -0.75
HCR1YLR192C DBP1P24784 617 aaKnown RBP10.36□□□□□ -0.75
HCR1YLR192C DMA1P38823 416 aa10.32□□□□□ -0.76
HCR1YLR192C SGS1P35187 1447 aa10.27□□□□□ -0.77
HCR1YLR192C MAK11P20484 414 aaKnown RBP10.26□□□□□ -0.77
HCR1YLR192C MDS3P53094 1487 aa10.21□□□□□ -0.78
HCR1YLR192C BUD31P25337 157 aaPredicted RBP10.2□□□□□ -0.78
HCR1YLR192C BUD4P47136 1447 aa10.18□□□□□ -0.78
HCR1YLR192C VMA1P17255 1071 aaKnown RBP10.18□□□□□ -0.78
HCR1YLR192C GTT3P39996 337 aa10.18□□□□□ -0.78
HCR1YLR192C RQC2Q12532 1038 aaKnown RBP10.18□□□□□ -0.78
HCR1YLR192C UBP9P39967 754 aa10.16□□□□□ -0.78
HCR1YLR192C THO2P53552 1597 aaKnown RBP10.16□□□□□ -0.78
HCR1YLR192C ABP1P15891 592 aaKnown RBP10.14□□□□□ -0.79
HCR1YLR192C COQ8P27697 501 aa10.14□□□□□ -0.79
HCR1YLR192C YBL029C-AQ3E756 94 aa10.14□□□□□ -0.79
HCR1YLR192C EDS1P38073 919 aa10.13□□□□□ -0.79
HCR1YLR192C WSC3Q12215 556 aa10.12□□□□□ -0.79
HCR1YLR192C SAM3Q08986 587 aa10.09□□□□□ -0.79
HCR1YLR192C SET1P38827 1080 aaKnown RBP10.08□□□□□ -0.8
HCR1YLR192C VNX1P42839 908 aa10.08□□□□□ -0.8
HCR1YLR192C BPT1P14772 1559 aa10.07□□□□□ -0.8
HCR1YLR192C SPT6P23615 1451 aaKnown RBP10.07□□□□□ -0.8
HCR1YLR192C HSL1P34244 1518 aa10.04□□□□□ -0.8
HCR1YLR192C YOL036WQ08206 761 aa10.04□□□□□ -0.8
HCR1YLR192C PEP1P32319 1579 aa10.03□□□□□ -0.8
HCR1YLR192C PTC3P34221 468 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms