RNA–Protein interactions for RNA: YLR171W

YLR171W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR171W, Length 390 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR171WYLR171W MTC1P47018 478 aaKnown RBP12.64□□□□□ -0.39
YLR171WYLR171W DRS1P32892 752 aaKnown RBP12.03□□□□□ -0.48
YLR171WYLR171W FAP1P53971 965 aa11.19□□□□□ -0.62
YLR171WYLR171W PRI1P10363 409 aa10.55□□□□□ -0.72
YLR171WYLR171W PRY3P47033 881 aa10.5□□□□□ -0.73
YLR171WYLR171W DIP2Q12220 943 aaPredicted RBP10.48□□□□□ -0.73
YLR171WYLR171W AAD16Q02895 342 aa10.46□□□□□ -0.73
YLR171WYLR171W ISW2Q08773 1120 aa10.44□□□□□ -0.74
YLR171WYLR171W RPG1P38249 964 aaKnown RBP10.34□□□□□ -0.75
YLR171WYLR171W AVT3P36062 692 aa10.14□□□□□ -0.79
YLR171WYLR171W BFR2Q06631 534 aaKnown RBP10.1□□□□□ -0.79
YLR171WYLR171W RSE1Q04693 1361 aaKnown RBP10.06□□□□□ -0.8
YLR171WYLR171W TSR3Q12094 313 aaKnown RBP10.01□□□□□ -0.81
YLR171WYLR171W YCK3P39962 524 aa9.89□□□□□ -0.83
YLR171WYLR171W HAA1Q12753 694 aaKnown RBP9.83□□□□□ -0.84
YLR171WYLR171W RPL17AP05740 184 aaKnown RBP9.74□□□□□ -0.85
YLR171WYLR171W RPL17BP46990 184 aaKnown RBP9.74□□□□□ -0.85
YLR171WYLR171W REB1P21538 810 aa9.68□□□□□ -0.86
YLR171WYLR171W MRPL32P25348 183 aa9.6□□□□□ -0.87
YLR171WYLR171W SPT21P35209 758 aa9.31□□□□□ -0.92
YLR171WYLR171W YKR023WP36119 530 aaKnown RBP9.18□□□□□ -0.94
YLR171WYLR171W CDC27P38042 758 aa9.15□□□□□ -0.94
YLR171WYLR171W YGL015CP33199 130 aa9.14□□□□□ -0.95
YLR171WYLR171W RIM101P33400 625 aa9.04□□□□□ -0.96
YLR171WYLR171W HOP09932 586 aa9.02□□□□□ -0.97
YLR171WYLR171W TFA1P36100 482 aa9□□□□□ -0.97
YLR171WYLR171W TFC8Q12308 588 aa8.99□□□□□ -0.97
YLR171WYLR171W DCD1P06773 312 aa8.98□□□□□ -0.97
YLR171WYLR171W MAP2P38174 421 aaKnown RBP8.85□□□□□ -0.99
YLR171WYLR171W UBP10P53874 792 aaPredicted RBP8.84□□□□□ -0.99
YLR171WYLR171W OXP1P28273 1286 aa8.74□□□□□ -1.01
YLR171WYLR171W BCH2P36122 765 aa8.71□□□□□ -1.02
YLR171WYLR171W SCY1P53009 804 aa8.71□□□□□ -1.02
YLR171WYLR171W YIL055CP40523 627 aaKnown RBP8.64□□□□□ -1.03
YLR171WYLR171W PTP3P40048 928 aa8.63□□□□□ -1.03
YLR171WYLR171W SLX5P32828 619 aaKnown RBP8.58□□□□□ -1.04
YLR171WYLR171W YAH1Q12184 172 aaKnown RBP8.55□□□□□ -1.04
YLR171WYLR171W EPS1P40557 701 aa8.5□□□□□ -1.05
YLR171WYLR171W TIF4632P39936 914 aaKnown RBP8.49□□□□□ -1.05
YLR171WYLR171W RSM7P47150 247 aa8.49□□□□□ -1.05
YLR171WYLR171W BDF1P35817 686 aa8.47□□□□□ -1.05
YLR171WYLR171W TGL3P40308 642 aa8.44□□□□□ -1.06
YLR171WYLR171W AI2P03876 854 aa8.41□□□□□ -1.06
YLR171WYLR171W YLR271WQ06152 274 aa8.4□□□□□ -1.06
YLR171WYLR171W BBC1P47068 1157 aa8.39□□□□□ -1.07
YLR171WYLR171W SSP1P38871 571 aa8.33□□□□□ -1.08
YLR171WYLR171W BUD31P25337 157 aaPredicted RBP8.27□□□□□ -1.09
YLR171WYLR171W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
YLR171WYLR171W PSD2P53037 1138 aaKnown RBP8.23□□□□□ -1.09
YLR171WYLR171W UBP9P39967 754 aa8.13□□□□□ -1.11
YLR171WYLR171W MRM1P25270 412 aa8.12□□□□□ -1.11
YLR171WYLR171W MGA2P40578 1113 aa8.11□□□□□ -1.11
YLR171WYLR171W CST9Q06032 482 aa8.11□□□□□ -1.11
YLR171WYLR171W YOR238WQ08634 303 aa8.11□□□□□ -1.11
YLR171WYLR171W MST1P07236 462 aa8.1□□□□□ -1.11
YLR171WYLR171W NSR1P27476 414 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
YLR171WYLR171W YAP5P40574 245 aa8.08□□□□□ -1.12
YLR171WYLR171W YBL029C-AQ3E756 94 aa7.97□□□□□ -1.13
YLR171WYLR171W PIB1Q06651 286 aa7.96□□□□□ -1.14
YLR171WYLR171W RTG3P38165 486 aa7.95□□□□□ -1.14
YLR171WYLR171W SIS1P25294 352 aaKnown RBP7.92□□□□□ -1.14
YLR171WYLR171W VPS29P38759 282 aa7.92□□□□□ -1.14
YLR171WYLR171W WSC3Q12215 556 aa7.91□□□□□ -1.14
YLR171WYLR171W RCR1P38212 213 aa7.9□□□□□ -1.14
YLR171WYLR171W GTT3P39996 337 aa7.9□□□□□ -1.14
YLR171WYLR171W VNX1P42839 908 aa7.89□□□□□ -1.15
YLR171WYLR171W YMR1P47147 688 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
YLR171WYLR171W DBP1P24784 617 aaKnown RBP7.86□□□□□ -1.15
YLR171WYLR171W YFR006WP43590 535 aa7.86□□□□□ -1.15
YLR171WYLR171W STS1P38637 319 aa7.83□□□□□ -1.16
YLR171WYLR171W SPP1Q03012 353 aa7.83□□□□□ -1.16
YLR171WYLR171W TIF11P38912 153 aaKnown RBP7.76□□□□□ -1.17
YLR171WYLR171W VMA1P17255 1071 aaKnown RBP7.75□□□□□ -1.17
YLR171WYLR171W RAM2P29703 316 aa7.71□□□□□ -1.18
YLR171WYLR171W SET4P42948 560 aa7.71□□□□□ -1.18
YLR171WYLR171W YOL036WQ08206 761 aa7.71□□□□□ -1.18
YLR171WYLR171W ULI1P43604 169 aa7.7□□□□□ -1.18
YLR171WYLR171W MSB4Q12317 492 aa7.69□□□□□ -1.18
YLR171WYLR171W SAM3Q08986 587 aa7.67□□□□□ -1.18
YLR171WYLR171W MAK11P20484 414 aaKnown RBP7.65□□□□□ -1.18
YLR171WYLR171W IOC2Q12072 812 aa7.65□□□□□ -1.18
YLR171WYLR171W LDB19Q12502 818 aa7.65□□□□□ -1.18
YLR171WYLR171W EAP1P36041 632 aaKnown RBP7.64□□□□□ -1.19
YLR171WYLR171W TRP5P00931 707 aaKnown RBP7.62□□□□□ -1.19
YLR171WYLR171W MIF2P35201 549 aa7.61□□□□□ -1.19
YLR171WYLR171W GYP5Q12344 894 aa7.61□□□□□ -1.19
YLR171WYLR171W FKH1P40466 484 aa7.6□□□□□ -1.19
YLR171WYLR171W AIR2Q12476 344 aaKnown RBP7.59□□□□□ -1.19
YLR171WYLR171W EDS1P38073 919 aa7.56□□□□□ -1.2
YLR171WYLR171W COQ8P27697 501 aa7.55□□□□□ -1.2
YLR171WYLR171W DCW1P36091 449 aa7.55□□□□□ -1.2
YLR171WYLR171W RTG1P32607 177 aa7.54□□□□□ -1.2
YLR171WYLR171W ABP1P15891 592 aaKnown RBP7.53□□□□□ -1.2
YLR171WYLR171W PTC3P34221 468 aaKnown RBP7.53□□□□□ -1.2
YLR171WYLR171W YJL171CP46992 396 aa7.53□□□□□ -1.2
YLR171WYLR171W GRE2Q12068 342 aaKnown RBP7.53□□□□□ -1.2
YLR171WYLR171W HTA1P04911 132 aaKnown RBP7.52□□□□□ -1.21
YLR171WYLR171W HTA2P04912 132 aa7.52□□□□□ -1.21
YLR171WYLR171W YNL035CP53962 389 aaKnown RBP7.51□□□□□ -1.21
YLR171WYLR171W NCR1Q12200 1170 aa7.49□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms