RNA–Protein interactions for RNA: YLR134W

PDC5, Transcript of Minor isoform of pyruvate decarboxylase, yeastyeast

Gene PDC5, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDC5YLR134W SGS1P35187 1447 aa12.75□□□□□ -0.37
PDC5YLR134W SPA2P23201 1466 aaKnown RBP12.44□□□□□ -0.42
PDC5YLR134W SSN2P38931 1420 aa12.36□□□□□ -0.43
PDC5YLR134W INO80P53115 1489 aa12.33□□□□□ -0.44
PDC5YLR134W TCB3Q03640 1545 aaKnown RBP12.09□□□□□ -0.47
PDC5YLR134W TY1B-DR4Q07793 1604 aa12.01□□□□□ -0.49
PDC5YLR134W DRS1P32892 752 aaKnown RBP11.94□□□□□ -0.5
PDC5YLR134W HSL1P34244 1518 aa11.86□□□□□ -0.51
PDC5YLR134W SPT6P23615 1451 aaKnown RBP11.78□□□□□ -0.52
PDC5YLR134W HIR3P47171 1648 aa11.67□□□□□ -0.54
PDC5YLR134W XRN1P22147 1528 aaKnown RBP11.63□□□□□ -0.55
PDC5YLR134W MON2P48563 1636 aaPredicted RBP11.63□□□□□ -0.55
PDC5YLR134W SWR1Q05471 1514 aa11.58□□□□□ -0.56
PDC5YLR134W REV3P14284 1504 aa11.51□□□□□ -0.57
PDC5YLR134W THO2P53552 1597 aaKnown RBP11.46□□□□□ -0.58
PDC5YLR134W SIN3P22579 1536 aa11.4□□□□□ -0.58
PDC5YLR134W TAF2P23255 1407 aa11.39□□□□□ -0.59
PDC5YLR134W SSK2P53599 1579 aa11.39□□□□□ -0.59
PDC5YLR134W SKI3P17883 1432 aaKnown RBP11.33□□□□□ -0.6
PDC5YLR134W ESP1Q03018 1630 aa11.31□□□□□ -0.6
PDC5YLR134W MMS22Q06164 1454 aa11.27□□□□□ -0.61
PDC5YLR134W MYO2P19524 1574 aaKnown RBP11.25□□□□□ -0.61
PDC5YLR134W CHD1P32657 1468 aa11.21□□□□□ -0.61
PDC5YLR134W ATG2P53855 1592 aa11.13□□□□□ -0.63
PDC5YLR134W STU1P38198 1513 aa11.13□□□□□ -0.63
PDC5YLR134W POL1P13382 1468 aa11.1□□□□□ -0.63
PDC5YLR134W DNA2P38859 1522 aa11.09□□□□□ -0.63
PDC5YLR134W BPT1P14772 1559 aa11.09□□□□□ -0.63
PDC5YLR134W BUD4P47136 1447 aa11.07□□□□□ -0.64
PDC5YLR134W KOG1P38873 1557 aa11.05□□□□□ -0.64
PDC5YLR134W RSE1Q04693 1361 aaKnown RBP11.05□□□□□ -0.64
PDC5YLR134W YPK9Q12697 1472 aa11.02□□□□□ -0.65
PDC5YLR134W RKR1Q04781 1562 aa11.01□□□□□ -0.65
PDC5YLR134W ECM5Q03214 1411 aa11□□□□□ -0.65
PDC5YLR134W SAS10Q12136 610 aaPredicted RBP11□□□□□ -0.65
PDC5YLR134W YTA7P40340 1379 aa10.95□□□□□ -0.66
PDC5YLR134W SCC2Q04002 1493 aa10.94□□□□□ -0.66
PDC5YLR134W PEP1P32319 1579 aa10.93□□□□□ -0.66
PDC5YLR134W YOR1P53049 1477 aa10.92□□□□□ -0.66
PDC5YLR134W UFD4P33202 1483 aa10.91□□□□□ -0.66
PDC5YLR134W TRM732Q03496 1420 aa10.9□□□□□ -0.66
PDC5YLR134W MDS3P53094 1487 aa10.89□□□□□ -0.67
PDC5YLR134W TY2B-LR1P0C2J3 1770 aa10.86□□□□□ -0.67
PDC5YLR134W TY2B-FP0CX63 1770 aa10.86□□□□□ -0.67
PDC5YLR134W TY2B-GR2P0CX64 1770 aa10.86□□□□□ -0.67
PDC5YLR134W TY2B-CP25384 1770 aa10.86□□□□□ -0.67
PDC5YLR134W TY2B-DR2Q03494 1770 aa10.86□□□□□ -0.67
PDC5YLR134W TY1B-DR1Q03855 1755 aa10.86□□□□□ -0.67
PDC5YLR134W TY2B-DR3Q07791 1770 aaKnown RBP10.86□□□□□ -0.67
PDC5YLR134W TY2B-OR1Q12113 1770 aa10.86□□□□□ -0.67
PDC5YLR134W TY2B-DR1Q12472 1770 aa10.86□□□□□ -0.67
PDC5YLR134W TY2B-OR2Q12501 1770 aa10.86□□□□□ -0.67
PDC5YLR134W TY1B-DR3Q99231 1755 aa10.85□□□□□ -0.67
PDC5YLR134W MYO4P32492 1471 aa10.85□□□□□ -0.67
PDC5YLR134W RPO31P04051 1460 aa10.84□□□□□ -0.67
PDC5YLR134W MLP2P40457 1679 aa10.8□□□□□ -0.68
PDC5YLR134W YCF1P39109 1515 aaKnown RBP10.79□□□□□ -0.68
PDC5YLR134W TOP2P06786 1428 aaKnown RBP10.79□□□□□ -0.68
PDC5YLR134W SNQ2P32568 1501 aaKnown RBP10.79□□□□□ -0.68
PDC5YLR134W TY2B-BQ12491 1770 aa10.78□□□□□ -0.68
PDC5YLR134W SMC4Q12267 1418 aa10.77□□□□□ -0.68
PDC5YLR134W IKI3Q06706 1349 aaKnown RBP10.75□□□□□ -0.69
PDC5YLR134W STH1P32597 1359 aa10.72□□□□□ -0.69
PDC5YLR134W PDR15Q04182 1529 aaKnown RBP10.7□□□□□ -0.7
PDC5YLR134W SSM4P40318 1319 aa10.68□□□□□ -0.7
PDC5YLR134W ULS1Q08562 1619 aa10.67□□□□□ -0.7
PDC5YLR134W NUP170P38181 1502 aa10.67□□□□□ -0.7
PDC5YLR134W TY1B-HO13535 1793 aa10.66□□□□□ -0.7
PDC5YLR134W TY1B-DR5P0C2I2 1755 aa10.66□□□□□ -0.7
PDC5YLR134W TY1B-DR6P0C2I3 1755 aa10.66□□□□□ -0.7
PDC5YLR134W TY1B-LR2P0C2I5 1755 aa10.66□□□□□ -0.7
PDC5YLR134W TY1B-LR3P0C2I6 1755 aaKnown RBP10.66□□□□□ -0.7
PDC5YLR134W TY1B-PR1P0C2I9 1755 aaKnown RBP10.66□□□□□ -0.7
PDC5YLR134W TY1B-PR2P0C2J0 1756 aa10.66□□□□□ -0.7
PDC5YLR134W TY1B-PR3P0C2J1 1755 aaKnown RBP10.66□□□□□ -0.7
PDC5YLR134W TY1B-JR1P47098 1755 aa10.66□□□□□ -0.7
PDC5YLR134W TY1B-ML2Q03434 1755 aaKnown RBP10.66□□□□□ -0.7
PDC5YLR134W TY1B-ER1Q03612 1755 aa10.66□□□□□ -0.7
PDC5YLR134W TY1B-ML1Q04711 1755 aaKnown RBP10.66□□□□□ -0.7
PDC5YLR134W TY1B-GR2Q12269 1755 aa10.66□□□□□ -0.7
PDC5YLR134W TY1B-OLQ12273 1755 aa10.66□□□□□ -0.7
PDC5YLR134W TY1B-PLQ12414 1755 aaKnown RBP10.66□□□□□ -0.7
PDC5YLR134W IFH1P39520 1085 aa10.66□□□□□ -0.7
PDC5YLR134W TY1B-BRQ12193 1756 aa10.64□□□□□ -0.71
PDC5YLR134W TY1B-GR3Q12316 1755 aa10.64□□□□□ -0.71
PDC5YLR134W TY1B-ORQ92393 1755 aa10.64□□□□□ -0.71
PDC5YLR134W TAF7Q05021 590 aa10.63□□□□□ -0.71
PDC5YLR134W GEA1P47102 1408 aaPredicted RBP10.61□□□□□ -0.71
PDC5YLR134W SPP41P38904 1435 aa10.59□□□□□ -0.71
PDC5YLR134W NSR1P27476 414 aaKnown RBP RIP-Chip data10.56□□□□□ -0.72not detected
PDC5YLR134W RQC2Q12532 1038 aaKnown RBP10.55□□□□□ -0.72
PDC5YLR134W TY3B-GQ99315 1547 aa10.55□□□□□ -0.72
PDC5YLR134W TSC11P40061 1430 aa10.53□□□□□ -0.72
PDC5YLR134W VTH1P40438 1549 aa10.52□□□□□ -0.73
PDC5YLR134W VTH2P40890 1549 aa10.52□□□□□ -0.73
PDC5YLR134W TY1B-JR2P47100 1755 aaKnown RBP10.51□□□□□ -0.73
PDC5YLR134W TY1B-ER2Q03619 1755 aa10.51□□□□□ -0.73
PDC5YLR134W TY1B-MR1Q04214 1755 aa10.51□□□□□ -0.73
PDC5YLR134W TY1B-MR2Q04670 1755 aaKnown RBP10.51□□□□□ -0.73
PDC5YLR134W TY1B-LR1Q12088 1755 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms