RNA–Protein interactions for RNA: YLR098C

CHA4, Transcript of DNA binding transcriptional activator, yeastyeast

Gene CHA4, Length 1,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHA4YLR098C MTC1P47018 478 aaKnown RBP11.25□□□□□ -0.61
CHA4YLR098C DRS1P32892 752 aaKnown RBP10.64□□□□□ -0.71
CHA4YLR098C FAP1P53971 965 aa10.01□□□□□ -0.81
CHA4YLR098C PRI1P10363 409 aa9.43□□□□□ -0.9
CHA4YLR098C PRY3P47033 881 aa9.41□□□□□ -0.9
CHA4YLR098C AAD16Q02895 342 aa9.35□□□□□ -0.91
CHA4YLR098C ISW2Q08773 1120 aa9.29□□□□□ -0.92
CHA4YLR098C DIP2Q12220 943 aaPredicted RBP9.28□□□□□ -0.92
CHA4YLR098C RPG1P38249 964 aaKnown RBP9.22□□□□□ -0.93
CHA4YLR098C AVT3P36062 692 aa8.97□□□□□ -0.97
CHA4YLR098C TSR3Q12094 313 aaKnown RBP8.94□□□□□ -0.98
CHA4YLR098C RSE1Q04693 1361 aaKnown RBP8.94□□□□□ -0.98
CHA4YLR098C YCK3P39962 524 aa8.9□□□□□ -0.98
CHA4YLR098C BFR2Q06631 534 aaKnown RBP8.9□□□□□ -0.99
CHA4YLR098C HAA1Q12753 694 aaKnown RBP8.81□□□□□ -1
CHA4YLR098C RPL17AP05740 184 aaKnown RBP8.67□□□□□ -1.02
CHA4YLR098C RPL17BP46990 184 aaKnown RBP8.67□□□□□ -1.02
CHA4YLR098C REB1P21538 810 aa8.6□□□□□ -1.03
CHA4YLR098C MRPL32P25348 183 aa8.56□□□□□ -1.04
CHA4YLR098C SPT21P35209 758 aa8.28□□□□□ -1.08
CHA4YLR098C YKR023WP36119 530 aaKnown RBP8.18□□□□□ -1.1
CHA4YLR098C CDC27P38042 758 aa8.18□□□□□ -1.1
CHA4YLR098C YGL015CP33199 130 aa8.17□□□□□ -1.1
CHA4YLR098C HOP09932 586 aa8.02□□□□□ -1.13
CHA4YLR098C RIM101P33400 625 aa8.02□□□□□ -1.13
CHA4YLR098C TFC8Q12308 588 aa8□□□□□ -1.13
CHA4YLR098C DCD1P06773 312 aa7.99□□□□□ -1.13
CHA4YLR098C MAP2P38174 421 aaKnown RBP7.9□□□□□ -1.14
CHA4YLR098C TFA1P36100 482 aa7.89□□□□□ -1.15
CHA4YLR098C UBP10P53874 792 aaPredicted RBP7.89□□□□□ -1.15
CHA4YLR098C OXP1P28273 1286 aa7.78□□□□□ -1.16
CHA4YLR098C SCY1P53009 804 aa7.77□□□□□ -1.17
CHA4YLR098C BCH2P36122 765 aa7.75□□□□□ -1.17
CHA4YLR098C SLX5P32828 619 aaKnown RBP7.64□□□□□ -1.19
CHA4YLR098C YIL055CP40523 627 aaKnown RBP7.64□□□□□ -1.19
CHA4YLR098C PTP3P40048 928 aa7.63□□□□□ -1.19
CHA4YLR098C YAH1Q12184 172 aaKnown RBP7.57□□□□□ -1.2
CHA4YLR098C TIF4632P39936 914 aaKnown RBP7.56□□□□□ -1.2
CHA4YLR098C EPS1P40557 701 aa7.56□□□□□ -1.2
CHA4YLR098C TGL3P40308 642 aa7.53□□□□□ -1.2
CHA4YLR098C RSM7P47150 247 aa7.53□□□□□ -1.2
CHA4YLR098C BDF1P35817 686 aa7.52□□□□□ -1.2
CHA4YLR098C AI2P03876 854 aa7.45□□□□□ -1.22
CHA4YLR098C BUD31P25337 157 aaPredicted RBP7.44□□□□□ -1.22
CHA4YLR098C BBC1P47068 1157 aa7.43□□□□□ -1.22
CHA4YLR098C YLR271WQ06152 274 aa7.43□□□□□ -1.22
CHA4YLR098C SSP1P38871 571 aa7.37□□□□□ -1.23
CHA4YLR098C PSD2P53037 1138 aaKnown RBP7.29□□□□□ -1.24
CHA4YLR098C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
CHA4YLR098C UBP9P39967 754 aa7.26□□□□□ -1.25
CHA4YLR098C MST1P07236 462 aa7.23□□□□□ -1.25
CHA4YLR098C YOR238WQ08634 303 aa7.23□□□□□ -1.25
CHA4YLR098C NSR1P27476 414 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
CHA4YLR098C MRM1P25270 412 aa7.2□□□□□ -1.26
CHA4YLR098C YAP5P40574 245 aa7.19□□□□□ -1.26
CHA4YLR098C CST9Q06032 482 aa7.18□□□□□ -1.26
CHA4YLR098C MGA2P40578 1113 aa7.15□□□□□ -1.26
CHA4YLR098C YBL029C-AQ3E756 94 aa7.11□□□□□ -1.27
CHA4YLR098C SIS1P25294 352 aaKnown RBP7.11□□□□□ -1.27
CHA4YLR098C PIB1Q06651 286 aa7.07□□□□□ -1.28
CHA4YLR098C VNX1P42839 908 aa7.05□□□□□ -1.28
CHA4YLR098C WSC3Q12215 556 aa7.05□□□□□ -1.28
CHA4YLR098C RTG3P38165 486 aa7.04□□□□□ -1.28
CHA4YLR098C VPS29P38759 282 aa7.03□□□□□ -1.28
CHA4YLR098C GTT3P39996 337 aa7.03□□□□□ -1.28
CHA4YLR098C RCR1P38212 213 aa6.99□□□□□ -1.29
CHA4YLR098C YMR1P47147 688 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
CHA4YLR098C DBP1P24784 617 aaKnown RBP6.98□□□□□ -1.29
CHA4YLR098C YFR006WP43590 535 aa6.98□□□□□ -1.29
CHA4YLR098C SPP1Q03012 353 aa6.97□□□□□ -1.29
CHA4YLR098C STS1P38637 319 aa6.95□□□□□ -1.3
CHA4YLR098C TIF11P38912 153 aaKnown RBP6.93□□□□□ -1.3
CHA4YLR098C VMA1P17255 1071 aaKnown RBP6.88□□□□□ -1.31
CHA4YLR098C ULI1P43604 169 aa6.87□□□□□ -1.31
CHA4YLR098C YOL036WQ08206 761 aa6.86□□□□□ -1.31
CHA4YLR098C SET4P42948 560 aa6.86□□□□□ -1.31
CHA4YLR098C MSB4Q12317 492 aa6.85□□□□□ -1.31
CHA4YLR098C SAM3Q08986 587 aa6.83□□□□□ -1.32
CHA4YLR098C IOC2Q12072 812 aa6.83□□□□□ -1.32
CHA4YLR098C RAM2P29703 316 aa6.82□□□□□ -1.32
CHA4YLR098C LDB19Q12502 818 aa6.82□□□□□ -1.32
CHA4YLR098C EAP1P36041 632 aaKnown RBP6.8□□□□□ -1.32
CHA4YLR098C FKH1P40466 484 aa6.8□□□□□ -1.32
CHA4YLR098C AIR2Q12476 344 aaKnown RBP6.8□□□□□ -1.32
CHA4YLR098C TRP5P00931 707 aaKnown RBP6.78□□□□□ -1.32
CHA4YLR098C MAK11P20484 414 aaKnown RBP6.76□□□□□ -1.33
CHA4YLR098C GYP5Q12344 894 aa6.76□□□□□ -1.33
CHA4YLR098C RTG1P32607 177 aa6.72□□□□□ -1.33
CHA4YLR098C MIF2P35201 549 aa6.72□□□□□ -1.33
CHA4YLR098C DCW1P36091 449 aa6.71□□□□□ -1.34
CHA4YLR098C EDS1P38073 919 aa6.71□□□□□ -1.34
CHA4YLR098C YJL171CP46992 396 aa6.71□□□□□ -1.34
CHA4YLR098C ABP1P15891 592 aaKnown RBP6.69□□□□□ -1.34
CHA4YLR098C YNL035CP53962 389 aaKnown RBP6.69□□□□□ -1.34
CHA4YLR098C HTA1P04911 132 aaKnown RBP6.68□□□□□ -1.34
CHA4YLR098C HTA2P04912 132 aa6.68□□□□□ -1.34
CHA4YLR098C COQ8P27697 501 aa6.68□□□□□ -1.34
CHA4YLR098C PTC3P34221 468 aaKnown RBP6.66□□□□□ -1.34
CHA4YLR098C GRE2Q12068 342 aaKnown RBP6.66□□□□□ -1.34
CHA4YLR098C NCR1Q12200 1170 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms