RNA–Protein interactions for RNA: YLR080W

EMP46, Transcript of Integral membrane component of ER-derived COPII-coated vesicles, yeastyeast

Gene EMP46, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EMP46YLR080W MTC1P47018 478 aaKnown RBP12.36□□□□□ -0.43
EMP46YLR080W DRS1P32892 752 aaKnown RBP12□□□□□ -0.49
EMP46YLR080W MON2P48563 1636 aaPredicted RBP11□□□□□ -0.65
EMP46YLR080W INO80P53115 1489 aa10.95□□□□□ -0.66
EMP46YLR080W FAP1P53971 965 aa10.62□□□□□ -0.71
EMP46YLR080W DNA2P38859 1522 aa10.44□□□□□ -0.74
EMP46YLR080W DIP2Q12220 943 aaPredicted RBP10.34□□□□□ -0.75
EMP46YLR080W RSE1Q04693 1361 aaKnown RBP10.33□□□□□ -0.76
EMP46YLR080W SWR1Q05471 1514 aa10.27□□□□□ -0.76
EMP46YLR080W KOG1P38873 1557 aa10.27□□□□□ -0.77
EMP46YLR080W BFR2Q06631 534 aaKnown RBP10.19□□□□□ -0.78
EMP46YLR080W PRI1P10363 409 aa10.16□□□□□ -0.78
EMP46YLR080W AVT3P36062 692 aa10.12□□□□□ -0.79
EMP46YLR080W ISW2Q08773 1120 aa10.12□□□□□ -0.79
EMP46YLR080W AAD16Q02895 342 aa10.03□□□□□ -0.8
EMP46YLR080W RPG1P38249 964 aaKnown RBP10.01□□□□□ -0.81
EMP46YLR080W PRY3P47033 881 aa10□□□□□ -0.81
EMP46YLR080W TY1B-DR4Q07793 1604 aa9.97□□□□□ -0.81
EMP46YLR080W TCB3Q03640 1545 aaKnown RBP9.9□□□□□ -0.82
EMP46YLR080W SPA2P23201 1466 aaKnown RBP9.8□□□□□ -0.84
EMP46YLR080W TSR3Q12094 313 aaKnown RBP9.62□□□□□ -0.87
EMP46YLR080W RPL17AP05740 184 aaKnown RBP9.53□□□□□ -0.88
EMP46YLR080W RPL17BP46990 184 aaKnown RBP9.53□□□□□ -0.88
EMP46YLR080W HSL1P34244 1518 aa9.53□□□□□ -0.88
EMP46YLR080W SPT6P23615 1451 aaKnown RBP9.52□□□□□ -0.89
EMP46YLR080W YCK3P39962 524 aa9.51□□□□□ -0.89
EMP46YLR080W ECM5Q03214 1411 aa9.47□□□□□ -0.89
EMP46YLR080W REB1P21538 810 aa9.43□□□□□ -0.9
EMP46YLR080W THO2P53552 1597 aaKnown RBP9.39□□□□□ -0.91
EMP46YLR080W HAA1Q12753 694 aaKnown RBP9.38□□□□□ -0.91
EMP46YLR080W SGS1P35187 1447 aa9.37□□□□□ -0.91
EMP46YLR080W BUD4P47136 1447 aa9.37□□□□□ -0.91
EMP46YLR080W MDS3P53094 1487 aa9.37□□□□□ -0.91
EMP46YLR080W TFA1P36100 482 aa9.32□□□□□ -0.92
EMP46YLR080W REV3P14284 1504 aa9.28□□□□□ -0.92
EMP46YLR080W HIR3P47171 1648 aa9.28□□□□□ -0.92
EMP46YLR080W MRPL32P25348 183 aa9.23□□□□□ -0.93
EMP46YLR080W SPT21P35209 758 aa9.19□□□□□ -0.94
EMP46YLR080W MIF2P35201 549 aa9.17□□□□□ -0.94
EMP46YLR080W BPT1P14772 1559 aa9.16□□□□□ -0.94
EMP46YLR080W PEP1P32319 1579 aa9.15□□□□□ -0.94
EMP46YLR080W ATG2P53855 1592 aa9.05□□□□□ -0.96
EMP46YLR080W XRN1P22147 1528 aaKnown RBP9.03□□□□□ -0.96
EMP46YLR080W YCF1P39109 1515 aaKnown RBP8.99□□□□□ -0.97
EMP46YLR080W YKR023WP36119 530 aaKnown RBP8.97□□□□□ -0.97
EMP46YLR080W RIM101P33400 625 aa8.95□□□□□ -0.98
EMP46YLR080W CDC27P38042 758 aa8.88□□□□□ -0.99
EMP46YLR080W SSK2P53599 1579 aa8.87□□□□□ -0.99
EMP46YLR080W TAF2P23255 1407 aa8.87□□□□□ -0.99
EMP46YLR080W YFR006WP43590 535 aa8.83□□□□□ -1
EMP46YLR080W SKI3P17883 1432 aaKnown RBP8.82□□□□□ -1
EMP46YLR080W MYO2P19524 1574 aaKnown RBP8.81□□□□□ -1
EMP46YLR080W TFC8Q12308 588 aa8.79□□□□□ -1
EMP46YLR080W HOP09932 586 aa8.78□□□□□ -1
EMP46YLR080W ESC1Q03661 1658 aaKnown RBP8.76□□□□□ -1.01
EMP46YLR080W LTE1P07866 1435 aa8.74□□□□□ -1.01
EMP46YLR080W RPA190P10964 1664 aaKnown RBP8.74□□□□□ -1.01
EMP46YLR080W CDC25P04821 1589 aa8.73□□□□□ -1.01
EMP46YLR080W BNI1P41832 1953 aa8.73□□□□□ -1.01
EMP46YLR080W DCD1P06773 312 aa8.73□□□□□ -1.01
EMP46YLR080W MET5P47169 1442 aa8.71□□□□□ -1.01
EMP46YLR080W YGL015CP33199 130 aa8.71□□□□□ -1.02
EMP46YLR080W ABP1P15891 592 aaKnown RBP8.7□□□□□ -1.02
EMP46YLR080W UFD4P33202 1483 aa8.68□□□□□ -1.02
EMP46YLR080W SIN3P22579 1536 aa8.68□□□□□ -1.02
EMP46YLR080W OXP1P28273 1286 aa8.67□□□□□ -1.02
EMP46YLR080W DNF1P32660 1571 aa8.65□□□□□ -1.02
EMP46YLR080W GEA2P39993 1459 aaKnown RBP8.63□□□□□ -1.03
EMP46YLR080W RKR1Q04781 1562 aa8.63□□□□□ -1.03
EMP46YLR080W ESP1Q03018 1630 aa8.63□□□□□ -1.03
EMP46YLR080W IRC20Q06554 1556 aa8.59□□□□□ -1.03
EMP46YLR080W CHD1P32657 1468 aa8.58□□□□□ -1.04
EMP46YLR080W ITT1Q04638 464 aa8.58□□□□□ -1.04
EMP46YLR080W MMS1Q06211 1407 aa8.58□□□□□ -1.04
EMP46YLR080W UBP10P53874 792 aaPredicted RBP8.55□□□□□ -1.04
EMP46YLR080W RQC2Q12532 1038 aaKnown RBP8.55□□□□□ -1.04
EMP46YLR080W RPO31P04051 1460 aa8.55□□□□□ -1.04
EMP46YLR080W TY1B-BRQ12193 1756 aa8.54□□□□□ -1.04
EMP46YLR080W TY1B-GR3Q12316 1755 aa8.54□□□□□ -1.04
EMP46YLR080W TY1B-ORQ92393 1755 aa8.54□□□□□ -1.04
EMP46YLR080W MAP2P38174 421 aaKnown RBP8.54□□□□□ -1.04
EMP46YLR080W SCC2Q04002 1493 aa8.53□□□□□ -1.04
EMP46YLR080W TY2B-LR1P0C2J3 1770 aa8.52□□□□□ -1.05
EMP46YLR080W TY2B-FP0CX63 1770 aa8.52□□□□□ -1.05
EMP46YLR080W TY2B-GR2P0CX64 1770 aa8.52□□□□□ -1.05
EMP46YLR080W TY2B-CP25384 1770 aa8.52□□□□□ -1.05
EMP46YLR080W TY2B-DR2Q03494 1770 aa8.52□□□□□ -1.05
EMP46YLR080W TY1B-DR1Q03855 1755 aa8.52□□□□□ -1.05
EMP46YLR080W TY2B-DR3Q07791 1770 aaKnown RBP8.52□□□□□ -1.05
EMP46YLR080W TY2B-OR1Q12113 1770 aa8.52□□□□□ -1.05
EMP46YLR080W TY2B-DR1Q12472 1770 aa8.52□□□□□ -1.05
EMP46YLR080W TY2B-OR2Q12501 1770 aa8.52□□□□□ -1.05
EMP46YLR080W BCH2P36122 765 aa8.52□□□□□ -1.05
EMP46YLR080W YIL055CP40523 627 aaKnown RBP8.51□□□□□ -1.05
EMP46YLR080W PTP3P40048 928 aa8.5□□□□□ -1.05
EMP46YLR080W PAN1P32521 1480 aa8.48□□□□□ -1.05
EMP46YLR080W YPK9Q12697 1472 aa8.48□□□□□ -1.05
EMP46YLR080W YAH1Q12184 172 aaKnown RBP8.47□□□□□ -1.05
EMP46YLR080W SCY1P53009 804 aa8.45□□□□□ -1.06
EMP46YLR080W DNF2Q12675 1612 aa8.43□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms