RNA–Protein interactions for RNA: YLR051C

FCF2, Transcript of Nucleolar protein involved in the early steps of 35S rRNA processing, yeastyeast

Gene FCF2, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FCF2YLR051C MTC1P47018 478 aaKnown RBP11.16□□□□□ -0.62
FCF2YLR051C FAP1P53971 965 aa10.36□□□□□ -0.75
FCF2YLR051C DRS1P32892 752 aaKnown RBP10.16□□□□□ -0.78
FCF2YLR051C PRY3P47033 881 aa9.75□□□□□ -0.85
FCF2YLR051C PRI1P10363 409 aa9.58□□□□□ -0.88
FCF2YLR051C AAD16Q02895 342 aa9.55□□□□□ -0.88
FCF2YLR051C ISW2Q08773 1120 aa9.3□□□□□ -0.92
FCF2YLR051C YCK3P39962 524 aa9.26□□□□□ -0.93
FCF2YLR051C RPG1P38249 964 aaKnown RBP9.25□□□□□ -0.93
FCF2YLR051C HAA1Q12753 694 aaKnown RBP9.12□□□□□ -0.95
FCF2YLR051C TSR3Q12094 313 aaKnown RBP9.06□□□□□ -0.96
FCF2YLR051C DIP2Q12220 943 aaPredicted RBP9.03□□□□□ -0.96
FCF2YLR051C RSE1Q04693 1361 aaKnown RBP8.78□□□□□ -1
FCF2YLR051C MRPL32P25348 183 aa8.68□□□□□ -1.02
FCF2YLR051C AVT3P36062 692 aa8.63□□□□□ -1.03
FCF2YLR051C RPL17AP05740 184 aaKnown RBP8.53□□□□□ -1.04
FCF2YLR051C RPL17BP46990 184 aaKnown RBP8.53□□□□□ -1.04
FCF2YLR051C REB1P21538 810 aa8.5□□□□□ -1.05
FCF2YLR051C YGL015CP33199 130 aa8.4□□□□□ -1.06
FCF2YLR051C BFR2Q06631 534 aaKnown RBP8.3□□□□□ -1.08
FCF2YLR051C CDC27P38042 758 aa8.22□□□□□ -1.09
FCF2YLR051C SPT21P35209 758 aa8.14□□□□□ -1.11
FCF2YLR051C YKR023WP36119 530 aaKnown RBP8.14□□□□□ -1.11
FCF2YLR051C MAP2P38174 421 aaKnown RBP7.99□□□□□ -1.13
FCF2YLR051C HOP09932 586 aa7.97□□□□□ -1.13
FCF2YLR051C UBP10P53874 792 aaPredicted RBP7.97□□□□□ -1.13
FCF2YLR051C TFC8Q12308 588 aa7.96□□□□□ -1.14
FCF2YLR051C DCD1P06773 312 aa7.95□□□□□ -1.14
FCF2YLR051C RIM101P33400 625 aa7.82□□□□□ -1.16
FCF2YLR051C BUD31P25337 157 aaPredicted RBP7.81□□□□□ -1.16
FCF2YLR051C SCY1P53009 804 aa7.77□□□□□ -1.17
FCF2YLR051C BCH2P36122 765 aa7.7□□□□□ -1.18
FCF2YLR051C SLX5P32828 619 aaKnown RBP7.67□□□□□ -1.18
FCF2YLR051C TGL3P40308 642 aa7.65□□□□□ -1.18
FCF2YLR051C TIF4632P39936 914 aaKnown RBP7.64□□□□□ -1.19
FCF2YLR051C OXP1P28273 1286 aa7.57□□□□□ -1.2
FCF2YLR051C EPS1P40557 701 aa7.47□□□□□ -1.21
FCF2YLR051C BDF1P35817 686 aa7.46□□□□□ -1.22
FCF2YLR051C UBP9P39967 754 aa7.46□□□□□ -1.22
FCF2YLR051C SIS1P25294 352 aaKnown RBP7.41□□□□□ -1.22
FCF2YLR051C PTP3P40048 928 aa7.41□□□□□ -1.22
FCF2YLR051C YIL055CP40523 627 aaKnown RBP7.41□□□□□ -1.22
FCF2YLR051C RSM7P47150 247 aa7.32□□□□□ -1.24
FCF2YLR051C MST1P07236 462 aa7.3□□□□□ -1.24
FCF2YLR051C YAH1Q12184 172 aaKnown RBP7.28□□□□□ -1.24
FCF2YLR051C AI2P03876 854 aa7.27□□□□□ -1.25
FCF2YLR051C BBC1P47068 1157 aa7.26□□□□□ -1.25
FCF2YLR051C YOR238WQ08634 303 aa7.25□□□□□ -1.25
FCF2YLR051C YBL029C-AQ3E756 94 aa7.22□□□□□ -1.25
FCF2YLR051C NSR1P27476 414 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
FCF2YLR051C YLR271WQ06152 274 aa7.16□□□□□ -1.26
FCF2YLR051C YAP5P40574 245 aa7.15□□□□□ -1.26
FCF2YLR051C TFA1P36100 482 aa7.14□□□□□ -1.27
FCF2YLR051C VNX1P42839 908 aa7.14□□□□□ -1.27
FCF2YLR051C WSC3Q12215 556 aa7.07□□□□□ -1.28
FCF2YLR051C PSD2P53037 1138 aaKnown RBP7.06□□□□□ -1.28
FCF2YLR051C SPP1Q03012 353 aa7.06□□□□□ -1.28
FCF2YLR051C MRM1P25270 412 aa7□□□□□ -1.29
FCF2YLR051C PIB1Q06651 286 aa6.99□□□□□ -1.29
FCF2YLR051C SSP1P38871 571 aa6.98□□□□□ -1.29
FCF2YLR051C TIF11P38912 153 aaKnown RBP6.98□□□□□ -1.29
FCF2YLR051C GTT3P39996 337 aa6.98□□□□□ -1.29
FCF2YLR051C AIR2Q12476 344 aaKnown RBP6.94□□□□□ -1.3
FCF2YLR051C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
FCF2YLR051C FKH1P40466 484 aa6.9□□□□□ -1.3
FCF2YLR051C ULI1P43604 169 aa6.89□□□□□ -1.31
FCF2YLR051C CST9Q06032 482 aa6.89□□□□□ -1.31
FCF2YLR051C IOC2Q12072 812 aa6.89□□□□□ -1.31
FCF2YLR051C LDB19Q12502 818 aa6.88□□□□□ -1.31
FCF2YLR051C VPS29P38759 282 aa6.87□□□□□ -1.31
FCF2YLR051C YJL171CP46992 396 aa6.86□□□□□ -1.31
FCF2YLR051C MGA2P40578 1113 aa6.84□□□□□ -1.31
FCF2YLR051C YMR1P47147 688 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
FCF2YLR051C DBP1P24784 617 aaKnown RBP6.83□□□□□ -1.32
FCF2YLR051C RTG3P38165 486 aa6.83□□□□□ -1.32
FCF2YLR051C YFR006WP43590 535 aa6.82□□□□□ -1.32
FCF2YLR051C MSB4Q12317 492 aa6.81□□□□□ -1.32
FCF2YLR051C SET4P42948 560 aa6.79□□□□□ -1.32
FCF2YLR051C YOL036WQ08206 761 aa6.79□□□□□ -1.32
FCF2YLR051C EAP1P36041 632 aaKnown RBP6.78□□□□□ -1.32
FCF2YLR051C STS1P38637 319 aa6.78□□□□□ -1.32
FCF2YLR051C TRP5P00931 707 aaKnown RBP6.76□□□□□ -1.33
FCF2YLR051C VMA1P17255 1071 aaKnown RBP6.76□□□□□ -1.33
FCF2YLR051C RCR1P38212 213 aa6.76□□□□□ -1.33
FCF2YLR051C BMT6Q12291 365 aa6.76□□□□□ -1.33
FCF2YLR051C RTG1P32607 177 aa6.74□□□□□ -1.33
FCF2YLR051C SAM3Q08986 587 aa6.72□□□□□ -1.33
FCF2YLR051C NCR1Q12200 1170 aa6.71□□□□□ -1.34
FCF2YLR051C YNL035CP53962 389 aaKnown RBP6.69□□□□□ -1.34
FCF2YLR051C SEC61P32915 480 aa6.66□□□□□ -1.34
FCF2YLR051C DAN4P47179 1161 aa6.62□□□□□ -1.35
FCF2YLR051C GYP5Q12344 894 aa6.62□□□□□ -1.35
FCF2YLR051C DCW1P36091 449 aa6.58□□□□□ -1.36
FCF2YLR051C TFG1P41895 735 aaPredicted RBP6.57□□□□□ -1.36
FCF2YLR051C JIP4Q03361 876 aa6.57□□□□□ -1.36
FCF2YLR051C HTA1P04911 132 aaKnown RBP6.56□□□□□ -1.36
FCF2YLR051C HTA2P04912 132 aa6.56□□□□□ -1.36
FCF2YLR051C ABP1P15891 592 aaKnown RBP6.56□□□□□ -1.36
FCF2YLR051C PTC4P38089 393 aa6.54□□□□□ -1.36
FCF2YLR051C SAP30P38429 201 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms