RNA–Protein interactions for RNA: YLL041C

SDH2, Transcript of Iron-sulfur protein subunit of succinate dehydrogenase, yeastyeast

Gene SDH2, Length 801 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH2YLL041C MTC1P47018 478 aaKnown RBP10.72□□□□□ -0.69
SDH2YLL041C FAP1P53971 965 aa10.15□□□□□ -0.78
SDH2YLL041C DRS1P32892 752 aaKnown RBP9.57□□□□□ -0.88
SDH2YLL041C PRY3P47033 881 aa9.56□□□□□ -0.88
SDH2YLL041C PRI1P10363 409 aa9.3□□□□□ -0.92
SDH2YLL041C AAD16Q02895 342 aa9.3□□□□□ -0.92
SDH2YLL041C YCK3P39962 524 aa9.03□□□□□ -0.96
SDH2YLL041C ISW2Q08773 1120 aa8.98□□□□□ -0.97
SDH2YLL041C HAA1Q12753 694 aaKnown RBP8.95□□□□□ -0.98
SDH2YLL041C RPG1P38249 964 aaKnown RBP8.92□□□□□ -0.98
SDH2YLL041C TSR3Q12094 313 aaKnown RBP8.77□□□□□ -1.01
SDH2YLL041C DIP2Q12220 943 aaPredicted RBP8.56□□□□□ -1.04
SDH2YLL041C MRPL32P25348 183 aa8.42□□□□□ -1.06
SDH2YLL041C RSE1Q04693 1361 aaKnown RBP8.39□□□□□ -1.07
SDH2YLL041C YGL015CP33199 130 aa8.21□□□□□ -1.1
SDH2YLL041C RPL17AP05740 184 aaKnown RBP8.16□□□□□ -1.1
SDH2YLL041C RPL17BP46990 184 aaKnown RBP8.16□□□□□ -1.1
SDH2YLL041C REB1P21538 810 aa8.15□□□□□ -1.1
SDH2YLL041C AVT3P36062 692 aa8.12□□□□□ -1.11
SDH2YLL041C CDC27P38042 758 aa7.92□□□□□ -1.14
SDH2YLL041C YKR023WP36119 530 aaKnown RBP7.8□□□□□ -1.16
SDH2YLL041C SPT21P35209 758 aa7.77□□□□□ -1.17
SDH2YLL041C UBP10P53874 792 aaPredicted RBP7.74□□□□□ -1.17
SDH2YLL041C MAP2P38174 421 aaKnown RBP7.73□□□□□ -1.17
SDH2YLL041C BFR2Q06631 534 aaKnown RBP7.73□□□□□ -1.17
SDH2YLL041C BUD31P25337 157 aaPredicted RBP7.71□□□□□ -1.18
SDH2YLL041C HOP09932 586 aa7.64□□□□□ -1.19
SDH2YLL041C TFC8Q12308 588 aa7.64□□□□□ -1.19
SDH2YLL041C DCD1P06773 312 aa7.61□□□□□ -1.19
SDH2YLL041C SCY1P53009 804 aa7.49□□□□□ -1.21
SDH2YLL041C TIF4632P39936 914 aaKnown RBP7.44□□□□□ -1.22
SDH2YLL041C SLX5P32828 619 aaKnown RBP7.42□□□□□ -1.22
SDH2YLL041C RIM101P33400 625 aa7.42□□□□□ -1.22
SDH2YLL041C TGL3P40308 642 aa7.42□□□□□ -1.22
SDH2YLL041C BCH2P36122 765 aa7.38□□□□□ -1.23
SDH2YLL041C UBP9P39967 754 aa7.32□□□□□ -1.24
SDH2YLL041C SIS1P25294 352 aaKnown RBP7.3□□□□□ -1.24
SDH2YLL041C OXP1P28273 1286 aa7.16□□□□□ -1.26
SDH2YLL041C BDF1P35817 686 aa7.14□□□□□ -1.27
SDH2YLL041C EPS1P40557 701 aa7.14□□□□□ -1.27
SDH2YLL041C MST1P07236 462 aa7.07□□□□□ -1.28
SDH2YLL041C YIL055CP40523 627 aaKnown RBP7.05□□□□□ -1.28
SDH2YLL041C PTP3P40048 928 aa7.04□□□□□ -1.28
SDH2YLL041C YOR238WQ08634 303 aa7.01□□□□□ -1.29
SDH2YLL041C YBL029C-AQ3E756 94 aa7□□□□□ -1.29
SDH2YLL041C RSM7P47150 247 aa6.95□□□□□ -1.3
SDH2YLL041C NSR1P27476 414 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
SDH2YLL041C BBC1P47068 1157 aa6.94□□□□□ -1.3
SDH2YLL041C VNX1P42839 908 aa6.93□□□□□ -1.3
SDH2YLL041C AI2P03876 854 aa6.91□□□□□ -1.3
SDH2YLL041C YAP5P40574 245 aa6.89□□□□□ -1.31
SDH2YLL041C YAH1Q12184 172 aaKnown RBP6.87□□□□□ -1.31
SDH2YLL041C SPP1Q03012 353 aa6.85□□□□□ -1.31
SDH2YLL041C WSC3Q12215 556 aa6.83□□□□□ -1.32
SDH2YLL041C TIF11P38912 153 aaKnown RBP6.76□□□□□ -1.33
SDH2YLL041C YLR271WQ06152 274 aa6.75□□□□□ -1.33
SDH2YLL041C AIR2Q12476 344 aaKnown RBP6.75□□□□□ -1.33
SDH2YLL041C GTT3P39996 337 aa6.74□□□□□ -1.33
SDH2YLL041C FKH1P40466 484 aa6.71□□□□□ -1.34
SDH2YLL041C YJL171CP46992 396 aa6.71□□□□□ -1.34
SDH2YLL041C PSD2P53037 1138 aaKnown RBP6.69□□□□□ -1.34
SDH2YLL041C PIB1Q06651 286 aa6.67□□□□□ -1.34
SDH2YLL041C TFA1P36100 482 aa6.66□□□□□ -1.34
SDH2YLL041C ULI1P43604 169 aa6.66□□□□□ -1.34
SDH2YLL041C LDB19Q12502 818 aa6.66□□□□□ -1.34
SDH2YLL041C IOC2Q12072 812 aa6.65□□□□□ -1.34
SDH2YLL041C MRM1P25270 412 aa6.64□□□□□ -1.35
SDH2YLL041C BMT6Q12291 365 aa6.58□□□□□ -1.36
SDH2YLL041C MSB4Q12317 492 aa6.57□□□□□ -1.36
SDH2YLL041C EAP1P36041 632 aaKnown RBP6.55□□□□□ -1.36
SDH2YLL041C SSP1P38871 571 aa6.54□□□□□ -1.36
SDH2YLL041C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
SDH2YLL041C VPS29P38759 282 aa6.52□□□□□ -1.37
SDH2YLL041C SET4P42948 560 aa6.52□□□□□ -1.37
SDH2YLL041C YOL036WQ08206 761 aa6.52□□□□□ -1.37
SDH2YLL041C TRP5P00931 707 aaKnown RBP6.51□□□□□ -1.37
SDH2YLL041C DBP1P24784 617 aaKnown RBP6.51□□□□□ -1.37
SDH2YLL041C YMR1P47147 688 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
SDH2YLL041C RTG1P32607 177 aa6.5□□□□□ -1.37
SDH2YLL041C NCR1Q12200 1170 aa6.49□□□□□ -1.37
SDH2YLL041C YFR006WP43590 535 aa6.48□□□□□ -1.37
SDH2YLL041C CST9Q06032 482 aa6.48□□□□□ -1.37
SDH2YLL041C RTG3P38165 486 aa6.47□□□□□ -1.37
SDH2YLL041C VMA1P17255 1071 aaKnown RBP6.45□□□□□ -1.38
SDH2YLL041C YNL035CP53962 389 aaKnown RBP6.45□□□□□ -1.38
SDH2YLL041C SEC61P32915 480 aa6.44□□□□□ -1.38
SDH2YLL041C STS1P38637 319 aa6.44□□□□□ -1.38
SDH2YLL041C MGA2P40578 1113 aa6.43□□□□□ -1.38
SDH2YLL041C SAM3Q08986 587 aa6.43□□□□□ -1.38
SDH2YLL041C RCR1P38212 213 aa6.37□□□□□ -1.39
SDH2YLL041C TFG1P41895 735 aaPredicted RBP6.36□□□□□ -1.39
SDH2YLL041C DAN4P47179 1161 aa6.35□□□□□ -1.39
SDH2YLL041C JIP4Q03361 876 aa6.34□□□□□ -1.39
SDH2YLL041C GYP5Q12344 894 aa6.32□□□□□ -1.4
SDH2YLL041C ABP1P15891 592 aaKnown RBP6.31□□□□□ -1.4
SDH2YLL041C SAP30P38429 201 aa6.31□□□□□ -1.4
SDH2YLL041C YDL129WQ07555 291 aa6.29□□□□□ -1.4
SDH2YLL041C HTA1P04911 132 aaKnown RBP6.28□□□□□ -1.4
SDH2YLL041C HTA2P04912 132 aa6.28□□□□□ -1.4
SDH2YLL041C DCW1P36091 449 aa6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms