RNA–Protein interactions for RNA: YLL028W

TPO1, Transcript of Polyamine transporter of the major facilitator superfamily, yeastyeast

Gene TPO1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPO1YLL028W SGS1P35187 1447 aa13.28□□□□□ -0.28
TPO1YLL028W INO80P53115 1489 aa12.89□□□□□ -0.35
TPO1YLL028W SPA2P23201 1466 aaKnown RBP12.88□□□□□ -0.35
TPO1YLL028W SSN2P38931 1420 aa12.84□□□□□ -0.35
TPO1YLL028W TCB3Q03640 1545 aaKnown RBP12.68□□□□□ -0.38
TPO1YLL028W TY1B-DR4Q07793 1604 aa12.66□□□□□ -0.38
TPO1YLL028W HSL1P34244 1518 aa12.44□□□□□ -0.42
TPO1YLL028W MON2P48563 1636 aaPredicted RBP12.35□□□□□ -0.43
TPO1YLL028W SPT6P23615 1451 aaKnown RBP12.34□□□□□ -0.43
TPO1YLL028W DRS1P32892 752 aaKnown RBP12.31□□□□□ -0.44
TPO1YLL028W HIR3P47171 1648 aa12.23□□□□□ -0.45
TPO1YLL028W SWR1Q05471 1514 aa12.23□□□□□ -0.45
TPO1YLL028W XRN1P22147 1528 aaKnown RBP12.14□□□□□ -0.47
TPO1YLL028W REV3P14284 1504 aa12.02□□□□□ -0.49
TPO1YLL028W SIN3P22579 1536 aa11.93□□□□□ -0.5
TPO1YLL028W THO2P53552 1597 aaKnown RBP11.93□□□□□ -0.5
TPO1YLL028W SSK2P53599 1579 aa11.9□□□□□ -0.5
TPO1YLL028W TAF2P23255 1407 aa11.84□□□□□ -0.51
TPO1YLL028W ESP1Q03018 1630 aa11.81□□□□□ -0.52
TPO1YLL028W DNA2P38859 1522 aa11.75□□□□□ -0.53
TPO1YLL028W MYO2P19524 1574 aaKnown RBP11.69□□□□□ -0.54
TPO1YLL028W ATG2P53855 1592 aa11.69□□□□□ -0.54
TPO1YLL028W KOG1P38873 1557 aa11.66□□□□□ -0.54
TPO1YLL028W MMS22Q06164 1454 aa11.62□□□□□ -0.55
TPO1YLL028W BUD4P47136 1447 aa11.61□□□□□ -0.55
TPO1YLL028W SKI3P17883 1432 aaKnown RBP11.59□□□□□ -0.55
TPO1YLL028W CHD1P32657 1468 aa11.59□□□□□ -0.55
TPO1YLL028W ECM5Q03214 1411 aa11.56□□□□□ -0.56
TPO1YLL028W POL1P13382 1468 aa11.56□□□□□ -0.56
TPO1YLL028W STU1P38198 1513 aa11.55□□□□□ -0.56
TPO1YLL028W BPT1P14772 1559 aa11.53□□□□□ -0.56
TPO1YLL028W PEP1P32319 1579 aa11.53□□□□□ -0.56
TPO1YLL028W YPK9Q12697 1472 aa11.52□□□□□ -0.56
TPO1YLL028W MDS3P53094 1487 aa11.45□□□□□ -0.58
TPO1YLL028W SCC2Q04002 1493 aa11.45□□□□□ -0.58
TPO1YLL028W RKR1Q04781 1562 aa11.45□□□□□ -0.58
TPO1YLL028W TY2B-LR1P0C2J3 1770 aa11.39□□□□□ -0.59
TPO1YLL028W TY2B-FP0CX63 1770 aa11.39□□□□□ -0.59
TPO1YLL028W TY2B-GR2P0CX64 1770 aa11.39□□□□□ -0.59
TPO1YLL028W TY2B-CP25384 1770 aa11.39□□□□□ -0.59
TPO1YLL028W TY2B-DR2Q03494 1770 aa11.39□□□□□ -0.59
TPO1YLL028W TY1B-DR1Q03855 1755 aa11.39□□□□□ -0.59
TPO1YLL028W TY2B-DR3Q07791 1770 aaKnown RBP11.39□□□□□ -0.59
TPO1YLL028W TY2B-OR1Q12113 1770 aa11.39□□□□□ -0.59
TPO1YLL028W TY2B-DR1Q12472 1770 aa11.39□□□□□ -0.59
TPO1YLL028W TY2B-OR2Q12501 1770 aa11.39□□□□□ -0.59
TPO1YLL028W YOR1P53049 1477 aa11.38□□□□□ -0.59
TPO1YLL028W TY1B-DR3Q99231 1755 aa11.37□□□□□ -0.59
TPO1YLL028W RPO31P04051 1460 aa11.35□□□□□ -0.59
TPO1YLL028W YTA7P40340 1379 aa11.34□□□□□ -0.59
TPO1YLL028W RSE1Q04693 1361 aaKnown RBP11.33□□□□□ -0.6
TPO1YLL028W YCF1P39109 1515 aaKnown RBP11.31□□□□□ -0.6
TPO1YLL028W TY2B-BQ12491 1770 aa11.3□□□□□ -0.6
TPO1YLL028W SAS10Q12136 610 aaPredicted RBP11.28□□□□□ -0.6
TPO1YLL028W UFD4P33202 1483 aa11.28□□□□□ -0.6
TPO1YLL028W MYO4P32492 1471 aa11.27□□□□□ -0.61
TPO1YLL028W TOP2P06786 1428 aaKnown RBP11.27□□□□□ -0.61
TPO1YLL028W TRM732Q03496 1420 aa11.23□□□□□ -0.61
TPO1YLL028W SMC4Q12267 1418 aa11.23□□□□□ -0.61
TPO1YLL028W SNQ2P32568 1501 aaKnown RBP11.19□□□□□ -0.62
TPO1YLL028W MLP2P40457 1679 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-HO13535 1793 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-DR5P0C2I2 1755 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-DR6P0C2I3 1755 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-LR2P0C2I5 1755 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-LR3P0C2I6 1755 aaKnown RBP11.19□□□□□ -0.62
TPO1YLL028W TY1B-PR1P0C2I9 1755 aaKnown RBP11.19□□□□□ -0.62
TPO1YLL028W TY1B-PR2P0C2J0 1756 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-PR3P0C2J1 1755 aaKnown RBP11.19□□□□□ -0.62
TPO1YLL028W TY1B-JR1P47098 1755 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-ML2Q03434 1755 aaKnown RBP11.19□□□□□ -0.62
TPO1YLL028W TY1B-ER1Q03612 1755 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-ML1Q04711 1755 aaKnown RBP11.19□□□□□ -0.62
TPO1YLL028W TY1B-GR2Q12269 1755 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-OLQ12273 1755 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-PLQ12414 1755 aaKnown RBP11.19□□□□□ -0.62
TPO1YLL028W TY1B-BRQ12193 1756 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-GR3Q12316 1755 aa11.19□□□□□ -0.62
TPO1YLL028W TY1B-ORQ92393 1755 aa11.19□□□□□ -0.62
TPO1YLL028W ULS1Q08562 1619 aa11.11□□□□□ -0.63
TPO1YLL028W PDR15Q04182 1529 aaKnown RBP11.1□□□□□ -0.63
TPO1YLL028W STH1P32597 1359 aa11.08□□□□□ -0.64
TPO1YLL028W NUP170P38181 1502 aa11.06□□□□□ -0.64
TPO1YLL028W IKI3Q06706 1349 aaKnown RBP11.05□□□□□ -0.64
TPO1YLL028W TY1B-JR2P47100 1755 aaKnown RBP11.02□□□□□ -0.65
TPO1YLL028W TY1B-ER2Q03619 1755 aa11.02□□□□□ -0.65
TPO1YLL028W TY1B-MR1Q04214 1755 aa11.02□□□□□ -0.65
TPO1YLL028W TY1B-MR2Q04670 1755 aaKnown RBP11.02□□□□□ -0.65
TPO1YLL028W TY1B-LR1Q12088 1755 aaKnown RBP11.02□□□□□ -0.65
TPO1YLL028W TY1B-NL1Q12112 1755 aa11.02□□□□□ -0.65
TPO1YLL028W TY1B-GR1Q12141 1755 aa11.02□□□□□ -0.65
TPO1YLL028W TY1B-BLQ12490 1755 aa11.02□□□□□ -0.65
TPO1YLL028W SPP41P38904 1435 aa11.01□□□□□ -0.65
TPO1YLL028W SSM4P40318 1319 aa11□□□□□ -0.65
TPO1YLL028W ESC1Q03661 1658 aaKnown RBP10.99□□□□□ -0.65
TPO1YLL028W TY3B-GQ99315 1547 aa10.99□□□□□ -0.65
TPO1YLL028W CDC25P04821 1589 aa10.98□□□□□ -0.65
TPO1YLL028W GEA1P47102 1408 aaPredicted RBP10.98□□□□□ -0.65
TPO1YLL028W VTH1P40438 1549 aa10.97□□□□□ -0.65
TPO1YLL028W VTH2P40890 1549 aa10.97□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms