RNA–Protein interactions for RNA: YKR063C

LAS1, Transcript of Protein required for pre-rRNA processing at both ends of ITS2, yeastyeast

Gene LAS1, Length 1,509 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LAS1YKR063C MTC1P47018 478 aaKnown RBP16.65■□□□□ 0.26
LAS1YKR063C FAP1P53971 965 aa16.59■□□□□ 0.25
LAS1YKR063C PRY3P47033 881 aa15.65■□□□□ 0.1
LAS1YKR063C AAD16Q02895 342 aa14.92□□□□□ -0.02
LAS1YKR063C PRI1P10363 409 aa14.84□□□□□ -0.03
LAS1YKR063C YCK3P39962 524 aa14.73□□□□□ -0.05
LAS1YKR063C HAA1Q12753 694 aaKnown RBP14.59□□□□□ -0.07
LAS1YKR063C DRS1P32892 752 aaKnown RBP14.16□□□□□ -0.14
LAS1YKR063C ISW2Q08773 1120 aa14.11□□□□□ -0.15
LAS1YKR063C RPG1P38249 964 aaKnown RBP14.02□□□□□ -0.16
LAS1YKR063C TSR3Q12094 313 aaKnown RBP13.96□□□□□ -0.17
LAS1YKR063C MRPL32P25348 183 aa13.42□□□□□ -0.26
LAS1YKR063C YGL015CP33199 130 aa13.25□□□□□ -0.29
LAS1YKR063C DIP2Q12220 943 aaPredicted RBP12.93□□□□□ -0.34
LAS1YKR063C RSE1Q04693 1361 aaKnown RBP12.89□□□□□ -0.35
LAS1YKR063C BUD31P25337 157 aaPredicted RBP12.76□□□□□ -0.37
LAS1YKR063C REB1P21538 810 aa12.65□□□□□ -0.38
LAS1YKR063C RPL17AP05740 184 aaKnown RBP12.58□□□□□ -0.4
LAS1YKR063C RPL17BP46990 184 aaKnown RBP12.58□□□□□ -0.4
LAS1YKR063C CDC27P38042 758 aa12.49□□□□□ -0.41
LAS1YKR063C UBP10P53874 792 aaPredicted RBP12.3□□□□□ -0.44
LAS1YKR063C MAP2P38174 421 aaKnown RBP12.27□□□□□ -0.45
LAS1YKR063C YKR023WP36119 530 aaKnown RBP12.12□□□□□ -0.47
LAS1YKR063C AVT3P36062 692 aa12.06□□□□□ -0.48
LAS1YKR063C SIS1P25294 352 aaKnown RBP12.02□□□□□ -0.48
LAS1YKR063C SPT21P35209 758 aa11.92□□□□□ -0.5
LAS1YKR063C HOP09932 586 aa11.88□□□□□ -0.51
LAS1YKR063C DCD1P06773 312 aa11.87□□□□□ -0.51
LAS1YKR063C TFC8Q12308 588 aa11.86□□□□□ -0.51
LAS1YKR063C UBP9P39967 754 aa11.86□□□□□ -0.51
LAS1YKR063C TIF4632P39936 914 aaKnown RBP11.81□□□□□ -0.52
LAS1YKR063C TGL3P40308 642 aa11.8□□□□□ -0.52
LAS1YKR063C SCY1P53009 804 aa11.77□□□□□ -0.52
LAS1YKR063C SLX5P32828 619 aaKnown RBP11.7□□□□□ -0.54
LAS1YKR063C BCH2P36122 765 aa11.43□□□□□ -0.58
LAS1YKR063C RIM101P33400 625 aa11.2□□□□□ -0.62
LAS1YKR063C YBL029C-AQ3E756 94 aa11.19□□□□□ -0.62
LAS1YKR063C MST1P07236 462 aa11.14□□□□□ -0.63
LAS1YKR063C BFR2Q06631 534 aaKnown RBP11.11□□□□□ -0.63
LAS1YKR063C EPS1P40557 701 aa11.04□□□□□ -0.64
LAS1YKR063C BDF1P35817 686 aa11.04□□□□□ -0.64
LAS1YKR063C YOR238WQ08634 303 aa11.03□□□□□ -0.64
LAS1YKR063C VNX1P42839 908 aa11□□□□□ -0.65
LAS1YKR063C SPP1Q03012 353 aa10.9□□□□□ -0.66
LAS1YKR063C NSR1P27476 414 aaKnown RBP RIP-Chip data10.84□□□□□ -0.67not detected
LAS1YKR063C AIR2Q12476 344 aaKnown RBP10.82□□□□□ -0.68
LAS1YKR063C WSC3Q12215 556 aa10.81□□□□□ -0.68
LAS1YKR063C YJL171CP46992 396 aa10.79□□□□□ -0.68
LAS1YKR063C OXP1P28273 1286 aa10.79□□□□□ -0.68
LAS1YKR063C YAP5P40574 245 aa10.75□□□□□ -0.69
LAS1YKR063C FKH1P40466 484 aa10.74□□□□□ -0.69
LAS1YKR063C TIF11P38912 153 aaKnown RBP10.69□□□□□ -0.7
LAS1YKR063C PTP3P40048 928 aa10.68□□□□□ -0.7
LAS1YKR063C YIL055CP40523 627 aaKnown RBP10.63□□□□□ -0.71
LAS1YKR063C BBC1P47068 1157 aa10.59□□□□□ -0.71
LAS1YKR063C GTT3P39996 337 aa10.57□□□□□ -0.72
LAS1YKR063C LDB19Q12502 818 aa10.54□□□□□ -0.72
LAS1YKR063C BMT6Q12291 365 aa10.53□□□□□ -0.72
LAS1YKR063C AI2P03876 854 aa10.5□□□□□ -0.73
LAS1YKR063C ULI1P43604 169 aa10.48□□□□□ -0.73
LAS1YKR063C RSM7P47150 247 aa10.48□□□□□ -0.73
LAS1YKR063C IOC2Q12072 812 aa10.47□□□□□ -0.73
LAS1YKR063C PIB1Q06651 286 aa10.33□□□□□ -0.76
LAS1YKR063C YAH1Q12184 172 aaKnown RBP10.28□□□□□ -0.76
LAS1YKR063C MSB4Q12317 492 aa10.24□□□□□ -0.77
LAS1YKR063C RTG1P32607 177 aa10.23□□□□□ -0.77
LAS1YKR063C EAP1P36041 632 aaKnown RBP10.23□□□□□ -0.77
LAS1YKR063C NCR1Q12200 1170 aa10.19□□□□□ -0.78
LAS1YKR063C TRP5P00931 707 aaKnown RBP10.15□□□□□ -0.78
LAS1YKR063C SET4P42948 560 aa10.12□□□□□ -0.79
LAS1YKR063C YOL036WQ08206 761 aa10.12□□□□□ -0.79
LAS1YKR063C YNL035CP53962 389 aaKnown RBP10.09□□□□□ -0.79
LAS1YKR063C SEC61P32915 480 aa10.07□□□□□ -0.8
LAS1YKR063C MRM1P25270 412 aa10.05□□□□□ -0.8
LAS1YKR063C PSD2P53037 1138 aaKnown RBP10.05□□□□□ -0.8
LAS1YKR063C YLR271WQ06152 274 aa10.04□□□□□ -0.8
LAS1YKR063C BCK2P33306 851 aa9.99□□□□□ -0.81
LAS1YKR063C TFG1P41895 735 aaPredicted RBP9.96□□□□□ -0.82
LAS1YKR063C SAP30P38429 201 aa9.92□□□□□ -0.82
LAS1YKR063C YMR1P47147 688 aaKnown RBP RIP-Chip data9.92□□□□□ -0.82not detected
LAS1YKR063C DBP1P24784 617 aaKnown RBP9.91□□□□□ -0.82
LAS1YKR063C VMA1P17255 1071 aaKnown RBP9.88□□□□□ -0.83
LAS1YKR063C CHL1P22516 861 aaPredicted RBP9.87□□□□□ -0.83
LAS1YKR063C YFR006WP43590 535 aa9.87□□□□□ -0.83
LAS1YKR063C SAM3Q08986 587 aa9.87□□□□□ -0.83
LAS1YKR063C DAN4P47179 1161 aa9.86□□□□□ -0.83
LAS1YKR063C VPS29P38759 282 aa9.85□□□□□ -0.83
LAS1YKR063C YDL129WQ07555 291 aa9.82□□□□□ -0.84
LAS1YKR063C PRE3P38624 215 aa9.81□□□□□ -0.84
LAS1YKR063C JIP4Q03361 876 aa9.81□□□□□ -0.84
LAS1YKR063C STS1P38637 319 aa9.79□□□□□ -0.84
LAS1YKR063C RTG3P38165 486 aa9.73□□□□□ -0.85
LAS1YKR063C ABP1P15891 592 aaKnown RBP9.69□□□□□ -0.86
LAS1YKR063C XDJ1P39102 459 aa9.67□□□□□ -0.86
LAS1YKR063C GYP5Q12344 894 aa9.67□□□□□ -0.86
LAS1YKR063C HTA1P04911 132 aaKnown RBP9.65□□□□□ -0.86
LAS1YKR063C HTA2P04912 132 aa9.65□□□□□ -0.86
LAS1YKR063C VRP1P37370 817 aa9.65□□□□□ -0.86
LAS1YKR063C PTC4P38089 393 aa9.64□□□□□ -0.87
LAS1YKR063C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms