RNA–Protein interactions for RNA: YKL211C

TRP3, Transcript of Indole-3-glycerol-phosphate synthase, yeastyeast

Gene TRP3, Length 1,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP3YKL211C MTC1P47018 478 aaKnown RBP14.5□□□□□ -0.09
TRP3YKL211C FAP1P53971 965 aa13.43□□□□□ -0.26
TRP3YKL211C DRS1P32892 752 aaKnown RBP13.19□□□□□ -0.3
TRP3YKL211C PRY3P47033 881 aa12.6□□□□□ -0.39
TRP3YKL211C PRI1P10363 409 aa12.4□□□□□ -0.42
TRP3YKL211C AAD16Q02895 342 aa12.4□□□□□ -0.43
TRP3YKL211C ISW2Q08773 1120 aa12.17□□□□□ -0.46
TRP3YKL211C RPG1P38249 964 aaKnown RBP11.96□□□□□ -0.49
TRP3YKL211C HAA1Q12753 694 aaKnown RBP11.9□□□□□ -0.5
TRP3YKL211C YCK3P39962 524 aa11.75□□□□□ -0.53
TRP3YKL211C DIP2Q12220 943 aaPredicted RBP11.7□□□□□ -0.54
TRP3YKL211C TSR3Q12094 313 aaKnown RBP11.65□□□□□ -0.54
TRP3YKL211C RSE1Q04693 1361 aaKnown RBP11.45□□□□□ -0.58
TRP3YKL211C MRPL32P25348 183 aa11.32□□□□□ -0.6
TRP3YKL211C AVT3P36062 692 aa11.15□□□□□ -0.62
TRP3YKL211C REB1P21538 810 aa11.09□□□□□ -0.63
TRP3YKL211C RPL17AP05740 184 aaKnown RBP11.05□□□□□ -0.64
TRP3YKL211C RPL17BP46990 184 aaKnown RBP11.05□□□□□ -0.64
TRP3YKL211C YGL015CP33199 130 aa10.98□□□□□ -0.65
TRP3YKL211C BFR2Q06631 534 aaKnown RBP10.82□□□□□ -0.68
TRP3YKL211C CDC27P38042 758 aa10.55□□□□□ -0.72
TRP3YKL211C SPT21P35209 758 aa10.51□□□□□ -0.73
TRP3YKL211C YKR023WP36119 530 aaKnown RBP10.47□□□□□ -0.73
TRP3YKL211C UBP10P53874 792 aaPredicted RBP10.44□□□□□ -0.74
TRP3YKL211C MAP2P38174 421 aaKnown RBP10.3□□□□□ -0.76
TRP3YKL211C TFC8Q12308 588 aa10.3□□□□□ -0.76
TRP3YKL211C HOP09932 586 aa10.24□□□□□ -0.77
TRP3YKL211C DCD1P06773 312 aa10.16□□□□□ -0.78
TRP3YKL211C BUD31P25337 157 aaPredicted RBP10.15□□□□□ -0.78
TRP3YKL211C RIM101P33400 625 aa10.12□□□□□ -0.79
TRP3YKL211C TIF4632P39936 914 aaKnown RBP10.08□□□□□ -0.8
TRP3YKL211C SCY1P53009 804 aa10.05□□□□□ -0.8
TRP3YKL211C SLX5P32828 619 aaKnown RBP10.01□□□□□ -0.81
TRP3YKL211C TGL3P40308 642 aa10□□□□□ -0.81
TRP3YKL211C BCH2P36122 765 aa9.92□□□□□ -0.82
TRP3YKL211C UBP9P39967 754 aa9.85□□□□□ -0.83
TRP3YKL211C OXP1P28273 1286 aa9.7□□□□□ -0.86
TRP3YKL211C YIL055CP40523 627 aaKnown RBP9.7□□□□□ -0.86
TRP3YKL211C PTP3P40048 928 aa9.66□□□□□ -0.86
TRP3YKL211C EPS1P40557 701 aa9.66□□□□□ -0.86
TRP3YKL211C SIS1P25294 352 aaKnown RBP9.66□□□□□ -0.86
TRP3YKL211C BDF1P35817 686 aa9.64□□□□□ -0.87
TRP3YKL211C TFA1P36100 482 aa9.56□□□□□ -0.88
TRP3YKL211C BBC1P47068 1157 aa9.55□□□□□ -0.88
TRP3YKL211C MST1P07236 462 aa9.51□□□□□ -0.89
TRP3YKL211C RSM7P47150 247 aa9.51□□□□□ -0.89
TRP3YKL211C YOR238WQ08634 303 aa9.49□□□□□ -0.89
TRP3YKL211C NSR1P27476 414 aaKnown RBP RIP-Chip data9.47□□□□□ -0.89not detected
TRP3YKL211C AI2P03876 854 aa9.43□□□□□ -0.9
TRP3YKL211C YAH1Q12184 172 aaKnown RBP9.4□□□□□ -0.91
TRP3YKL211C YAP5P40574 245 aa9.38□□□□□ -0.91
TRP3YKL211C YBL029C-AQ3E756 94 aa9.34□□□□□ -0.91
TRP3YKL211C VNX1P42839 908 aa9.28□□□□□ -0.92
TRP3YKL211C YLR271WQ06152 274 aa9.23□□□□□ -0.93
TRP3YKL211C SPP1Q03012 353 aa9.22□□□□□ -0.93
TRP3YKL211C GTT3P39996 337 aa9.19□□□□□ -0.94
TRP3YKL211C WSC3Q12215 556 aa9.16□□□□□ -0.94
TRP3YKL211C PSD2P53037 1138 aaKnown RBP9.15□□□□□ -0.94
TRP3YKL211C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94not detected
TRP3YKL211C TIF11P38912 153 aaKnown RBP9.12□□□□□ -0.95
TRP3YKL211C SSP1P38871 571 aa9.08□□□□□ -0.96
TRP3YKL211C MRM1P25270 412 aa9.05□□□□□ -0.96
TRP3YKL211C YJL171CP46992 396 aa9.04□□□□□ -0.96
TRP3YKL211C FKH1P40466 484 aa9□□□□□ -0.97
TRP3YKL211C AIR2Q12476 344 aaKnown RBP9□□□□□ -0.97
TRP3YKL211C MSB4Q12317 492 aa8.99□□□□□ -0.97
TRP3YKL211C ULI1P43604 169 aa8.98□□□□□ -0.97
TRP3YKL211C EAP1P36041 632 aaKnown RBP8.97□□□□□ -0.97
TRP3YKL211C PIB1Q06651 286 aa8.96□□□□□ -0.97
TRP3YKL211C LDB19Q12502 818 aa8.96□□□□□ -0.97
TRP3YKL211C MGA2P40578 1113 aa8.94□□□□□ -0.98
TRP3YKL211C YMR1P47147 688 aaKnown RBP RIP-Chip data8.94□□□□□ -0.98not detected
TRP3YKL211C IOC2Q12072 812 aa8.93□□□□□ -0.98
TRP3YKL211C RTG3P38165 486 aa8.92□□□□□ -0.98
TRP3YKL211C BMT6Q12291 365 aa8.88□□□□□ -0.99
TRP3YKL211C DBP1P24784 617 aaKnown RBP8.86□□□□□ -0.99
TRP3YKL211C CST9Q06032 482 aa8.86□□□□□ -0.99
TRP3YKL211C VPS29P38759 282 aa8.85□□□□□ -0.99
TRP3YKL211C YOL036WQ08206 761 aa8.84□□□□□ -0.99
TRP3YKL211C SET4P42948 560 aa8.82□□□□□ -1
TRP3YKL211C TRP5P00931 707 aaKnown RBP8.79□□□□□ -1
TRP3YKL211C VMA1P17255 1071 aaKnown RBP8.79□□□□□ -1
TRP3YKL211C RTG1P32607 177 aa8.77□□□□□ -1
TRP3YKL211C SAM3Q08986 587 aa8.77□□□□□ -1
TRP3YKL211C SEC61P32915 480 aa8.77□□□□□ -1.01
TRP3YKL211C YFR006WP43590 535 aa8.77□□□□□ -1.01
TRP3YKL211C NCR1Q12200 1170 aa8.77□□□□□ -1.01
TRP3YKL211C YNL035CP53962 389 aaKnown RBP8.76□□□□□ -1.01
TRP3YKL211C ABP1P15891 592 aaKnown RBP8.75□□□□□ -1.01
TRP3YKL211C STS1P38637 319 aa8.75□□□□□ -1.01
TRP3YKL211C TFG1P41895 735 aaPredicted RBP8.72□□□□□ -1.01
TRP3YKL211C SPA2P23201 1466 aaKnown RBP8.7□□□□□ -1.02
TRP3YKL211C JIP4Q03361 876 aa8.68□□□□□ -1.02
TRP3YKL211C RCR1P38212 213 aa8.64□□□□□ -1.03
TRP3YKL211C GYP5Q12344 894 aa8.64□□□□□ -1.03
TRP3YKL211C HTA1P04911 132 aaKnown RBP8.62□□□□□ -1.03
TRP3YKL211C HTA2P04912 132 aa8.62□□□□□ -1.03
TRP3YKL211C DAN4P47179 1161 aa8.58□□□□□ -1.04
TRP3YKL211C SGS1P35187 1447 aa8.58□□□□□ -1.04
TRP3YKL211C PTC4P38089 393 aa8.57□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms