RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeastyeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS22YKL193C MTC1P47018 478 aaKnown RBP18.31■□□□□ 0.52
SDS22YKL193C FAP1P53971 965 aa17.34■□□□□ 0.37
SDS22YKL193C PRY3P47033 881 aa16.37■□□□□ 0.21
SDS22YKL193C DRS1P32892 752 aaKnown RBP16.28■□□□□ 0.2
SDS22YKL193C PRI1P10363 409 aa15.9■□□□□ 0.14
SDS22YKL193C AAD16Q02895 342 aa15.89■□□□□ 0.13
SDS22YKL193C YCK3P39962 524 aa15.56■□□□□ 0.08
SDS22YKL193C ISW2Q08773 1120 aa15.3■□□□□ 0.04
SDS22YKL193C HAA1Q12753 694 aaKnown RBP15.28■□□□□ 0.04
SDS22YKL193C RPG1P38249 964 aaKnown RBP15.22■□□□□ 0.03
SDS22YKL193C TSR3Q12094 313 aaKnown RBP15□□□□□ -0.01
SDS22YKL193C DIP2Q12220 943 aaPredicted RBP14.57□□□□□ -0.08
SDS22YKL193C MRPL32P25348 183 aa14.35□□□□□ -0.11
SDS22YKL193C RSE1Q04693 1361 aaKnown RBP14.3□□□□□ -0.12
SDS22YKL193C YGL015CP33199 130 aa13.98□□□□□ -0.17
SDS22YKL193C RPL17AP05740 184 aaKnown RBP13.92□□□□□ -0.18
SDS22YKL193C RPL17BP46990 184 aaKnown RBP13.92□□□□□ -0.18
SDS22YKL193C REB1P21538 810 aa13.88□□□□□ -0.19
SDS22YKL193C AVT3P36062 692 aa13.86□□□□□ -0.19
SDS22YKL193C CDC27P38042 758 aa13.59□□□□□ -0.23
SDS22YKL193C YKR023WP36119 530 aaKnown RBP13.35□□□□□ -0.27
SDS22YKL193C SPT21P35209 758 aa13.32□□□□□ -0.28
SDS22YKL193C MAP2P38174 421 aaKnown RBP13.23□□□□□ -0.29
SDS22YKL193C UBP10P53874 792 aaPredicted RBP13.22□□□□□ -0.29
SDS22YKL193C BUD31P25337 157 aaPredicted RBP13.21□□□□□ -0.29
SDS22YKL193C BFR2Q06631 534 aaKnown RBP13.13□□□□□ -0.31
SDS22YKL193C HOP09932 586 aa13.06□□□□□ -0.32
SDS22YKL193C DCD1P06773 312 aa13.05□□□□□ -0.32
SDS22YKL193C TFC8Q12308 588 aa13.05□□□□□ -0.32
SDS22YKL193C SCY1P53009 804 aa12.8□□□□□ -0.36
SDS22YKL193C SLX5P32828 619 aaKnown RBP12.65□□□□□ -0.38
SDS22YKL193C TIF4632P39936 914 aaKnown RBP12.65□□□□□ -0.38
SDS22YKL193C TGL3P40308 642 aa12.65□□□□□ -0.38
SDS22YKL193C RIM101P33400 625 aa12.64□□□□□ -0.39
SDS22YKL193C BCH2P36122 765 aa12.6□□□□□ -0.39
SDS22YKL193C SIS1P25294 352 aaKnown RBP12.46□□□□□ -0.41
SDS22YKL193C UBP9P39967 754 aa12.45□□□□□ -0.42
SDS22YKL193C OXP1P28273 1286 aa12.23□□□□□ -0.45
SDS22YKL193C EPS1P40557 701 aa12.21□□□□□ -0.45
SDS22YKL193C BDF1P35817 686 aa12.19□□□□□ -0.46
SDS22YKL193C MST1P07236 462 aa12.06□□□□□ -0.48
SDS22YKL193C PTP3P40048 928 aa11.99□□□□□ -0.49
SDS22YKL193C YBL029C-AQ3E756 94 aa11.99□□□□□ -0.49
SDS22YKL193C YIL055CP40523 627 aaKnown RBP11.93□□□□□ -0.5
SDS22YKL193C YOR238WQ08634 303 aa11.93□□□□□ -0.5
SDS22YKL193C NSR1P27476 414 aaKnown RBP RIP-Chip data11.86□□□□□ -0.51not detected
SDS22YKL193C VNX1P42839 908 aa11.82□□□□□ -0.52
SDS22YKL193C RSM7P47150 247 aa11.82□□□□□ -0.52
SDS22YKL193C BBC1P47068 1157 aa11.79□□□□□ -0.52
SDS22YKL193C AI2P03876 854 aa11.78□□□□□ -0.52
SDS22YKL193C YAP5P40574 245 aa11.74□□□□□ -0.53
SDS22YKL193C YAH1Q12184 172 aaKnown RBP11.7□□□□□ -0.54
SDS22YKL193C SPP1Q03012 353 aa11.68□□□□□ -0.54
SDS22YKL193C WSC3Q12215 556 aa11.67□□□□□ -0.54
SDS22YKL193C AIR2Q12476 344 aaKnown RBP11.55□□□□□ -0.56
SDS22YKL193C TIF11P38912 153 aaKnown RBP11.53□□□□□ -0.56
SDS22YKL193C FKH1P40466 484 aa11.51□□□□□ -0.57
SDS22YKL193C YLR271WQ06152 274 aa11.51□□□□□ -0.57
SDS22YKL193C GTT3P39996 337 aa11.47□□□□□ -0.57
SDS22YKL193C PSD2P53037 1138 aaKnown RBP11.44□□□□□ -0.58
SDS22YKL193C PIB1Q06651 286 aa11.41□□□□□ -0.58
SDS22YKL193C YJL171CP46992 396 aa11.39□□□□□ -0.59
SDS22YKL193C IOC2Q12072 812 aa11.36□□□□□ -0.59
SDS22YKL193C LDB19Q12502 818 aa11.36□□□□□ -0.59
SDS22YKL193C ULI1P43604 169 aa11.35□□□□□ -0.59
SDS22YKL193C MRM1P25270 412 aa11.32□□□□□ -0.6
SDS22YKL193C BMT6Q12291 365 aa11.22□□□□□ -0.61
SDS22YKL193C TFA1P36100 482 aa11.21□□□□□ -0.61
SDS22YKL193C MSB4Q12317 492 aa11.2□□□□□ -0.62
SDS22YKL193C YOL036WQ08206 761 aa11.14□□□□□ -0.63
SDS22YKL193C SET4P42948 560 aa11.13□□□□□ -0.63
SDS22YKL193C EAP1P36041 632 aaKnown RBP11.12□□□□□ -0.63
SDS22YKL193C VPS29P38759 282 aa11.12□□□□□ -0.63
SDS22YKL193C TRP5P00931 707 aaKnown RBP11.1□□□□□ -0.63
SDS22YKL193C SSP1P38871 571 aa11.1□□□□□ -0.63
SDS22YKL193C RTG1P32607 177 aa11.09□□□□□ -0.63
SDS22YKL193C DBP1P24784 617 aaKnown RBP11.08□□□□□ -0.64
SDS22YKL193C YMR1P47147 688 aaKnown RBP RIP-Chip data11.08□□□□□ -0.64not detected
SDS22YKL193C CST9Q06032 482 aa11.07□□□□□ -0.64
SDS22YKL193C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.07□□□□□ -0.64not detected
SDS22YKL193C YFR006WP43590 535 aa11.06□□□□□ -0.64
SDS22YKL193C STS1P38637 319 aa11.03□□□□□ -0.64
SDS22YKL193C NCR1Q12200 1170 aa11.02□□□□□ -0.65
SDS22YKL193C VMA1P17255 1071 aaKnown RBP11.01□□□□□ -0.65
SDS22YKL193C RTG3P38165 486 aa10.99□□□□□ -0.65
SDS22YKL193C YNL035CP53962 389 aaKnown RBP10.98□□□□□ -0.65
SDS22YKL193C SAM3Q08986 587 aa10.98□□□□□ -0.65
SDS22YKL193C SEC61P32915 480 aa10.95□□□□□ -0.66
SDS22YKL193C MGA2P40578 1113 aa10.93□□□□□ -0.66
SDS22YKL193C RCR1P38212 213 aa10.91□□□□□ -0.66
SDS22YKL193C DAN4P47179 1161 aa10.84□□□□□ -0.67
SDS22YKL193C SAP30P38429 201 aa10.78□□□□□ -0.68
SDS22YKL193C TFG1P41895 735 aaPredicted RBP10.76□□□□□ -0.69
SDS22YKL193C GYP5Q12344 894 aa10.76□□□□□ -0.69
SDS22YKL193C JIP4Q03361 876 aa10.75□□□□□ -0.69
SDS22YKL193C ABP1P15891 592 aaKnown RBP10.71□□□□□ -0.69
SDS22YKL193C YDL129WQ07555 291 aa10.71□□□□□ -0.69
SDS22YKL193C DCW1P36091 449 aa10.7□□□□□ -0.7
SDS22YKL193C HTA1P04911 132 aaKnown RBP10.68□□□□□ -0.7
SDS22YKL193C HTA2P04912 132 aa10.68□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms