RNA–Protein interactions for RNA: YKL163W

PIR3, Transcript of O-glycosylated covalently-bound cell wall protein, yeastyeast

Gene PIR3, Length 978 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PIR3YKL163W MTC1P47018 478 aaKnown RBP13.48□□□□□ -0.25
PIR3YKL163W DRS1P32892 752 aaKnown RBP12.54□□□□□ -0.4
PIR3YKL163W FAP1P53971 965 aa12.27□□□□□ -0.45
PIR3YKL163W PRY3P47033 881 aa11.55□□□□□ -0.56
PIR3YKL163W PRI1P10363 409 aa11.42□□□□□ -0.58
PIR3YKL163W AAD16Q02895 342 aa11.35□□□□□ -0.59
PIR3YKL163W ISW2Q08773 1120 aa11.17□□□□□ -0.62
PIR3YKL163W RPG1P38249 964 aaKnown RBP11.11□□□□□ -0.63
PIR3YKL163W DIP2Q12220 943 aaPredicted RBP11.02□□□□□ -0.65
PIR3YKL163W YCK3P39962 524 aa10.93□□□□□ -0.66
PIR3YKL163W TSR3Q12094 313 aaKnown RBP10.84□□□□□ -0.67
PIR3YKL163W HAA1Q12753 694 aaKnown RBP10.76□□□□□ -0.69
PIR3YKL163W RSE1Q04693 1361 aaKnown RBP10.65□□□□□ -0.71
PIR3YKL163W AVT3P36062 692 aa10.59□□□□□ -0.71
PIR3YKL163W BFR2Q06631 534 aaKnown RBP10.37□□□□□ -0.75
PIR3YKL163W RPL17AP05740 184 aaKnown RBP10.36□□□□□ -0.75
PIR3YKL163W MRPL32P25348 183 aa10.36□□□□□ -0.75
PIR3YKL163W RPL17BP46990 184 aaKnown RBP10.36□□□□□ -0.75
PIR3YKL163W REB1P21538 810 aa10.3□□□□□ -0.76
PIR3YKL163W YGL015CP33199 130 aa9.93□□□□□ -0.82
PIR3YKL163W SPT21P35209 758 aa9.88□□□□□ -0.83
PIR3YKL163W CDC27P38042 758 aa9.88□□□□□ -0.83
PIR3YKL163W YKR023WP36119 530 aaKnown RBP9.82□□□□□ -0.84
PIR3YKL163W HOP09932 586 aa9.65□□□□□ -0.86
PIR3YKL163W DCD1P06773 312 aa9.64□□□□□ -0.87
PIR3YKL163W TFC8Q12308 588 aa9.6□□□□□ -0.87
PIR3YKL163W MAP2P38174 421 aaKnown RBP9.57□□□□□ -0.88
PIR3YKL163W UBP10P53874 792 aaPredicted RBP9.52□□□□□ -0.89
PIR3YKL163W RIM101P33400 625 aa9.51□□□□□ -0.89
PIR3YKL163W SCY1P53009 804 aa9.36□□□□□ -0.91
PIR3YKL163W BCH2P36122 765 aa9.3□□□□□ -0.92
PIR3YKL163W OXP1P28273 1286 aa9.23□□□□□ -0.93
PIR3YKL163W SLX5P32828 619 aaKnown RBP9.21□□□□□ -0.94
PIR3YKL163W BUD31P25337 157 aaPredicted RBP9.15□□□□□ -0.94
PIR3YKL163W TIF4632P39936 914 aaKnown RBP9.12□□□□□ -0.95
PIR3YKL163W TGL3P40308 642 aa9.09□□□□□ -0.95
PIR3YKL163W PTP3P40048 928 aa9.07□□□□□ -0.96
PIR3YKL163W TFA1P36100 482 aa9.05□□□□□ -0.96
PIR3YKL163W YIL055CP40523 627 aaKnown RBP9.05□□□□□ -0.96
PIR3YKL163W EPS1P40557 701 aa9.05□□□□□ -0.96
PIR3YKL163W BDF1P35817 686 aa9.02□□□□□ -0.97
PIR3YKL163W YAH1Q12184 172 aaKnown RBP8.97□□□□□ -0.97
PIR3YKL163W RSM7P47150 247 aa8.92□□□□□ -0.98
PIR3YKL163W AI2P03876 854 aa8.86□□□□□ -0.99
PIR3YKL163W BBC1P47068 1157 aa8.83□□□□□ -1
PIR3YKL163W UBP9P39967 754 aa8.82□□□□□ -1
PIR3YKL163W YLR271WQ06152 274 aa8.79□□□□□ -1
PIR3YKL163W SIS1P25294 352 aaKnown RBP8.72□□□□□ -1.01
PIR3YKL163W MST1P07236 462 aa8.7□□□□□ -1.02
PIR3YKL163W YOR238WQ08634 303 aa8.69□□□□□ -1.02
PIR3YKL163W PSD2P53037 1138 aaKnown RBP8.64□□□□□ -1.03
PIR3YKL163W YBL029C-AQ3E756 94 aa8.64□□□□□ -1.03
PIR3YKL163W NSR1P27476 414 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
PIR3YKL163W SSP1P38871 571 aa8.62□□□□□ -1.03
PIR3YKL163W YAP5P40574 245 aa8.61□□□□□ -1.03
PIR3YKL163W MRM1P25270 412 aa8.55□□□□□ -1.04
PIR3YKL163W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
PIR3YKL163W VNX1P42839 908 aa8.51□□□□□ -1.05
PIR3YKL163W WSC3Q12215 556 aa8.51□□□□□ -1.05
PIR3YKL163W PIB1Q06651 286 aa8.5□□□□□ -1.05
PIR3YKL163W CST9Q06032 482 aa8.49□□□□□ -1.05
PIR3YKL163W SPP1Q03012 353 aa8.44□□□□□ -1.06
PIR3YKL163W GTT3P39996 337 aa8.43□□□□□ -1.06
PIR3YKL163W MGA2P40578 1113 aa8.41□□□□□ -1.06
PIR3YKL163W VPS29P38759 282 aa8.35□□□□□ -1.07
PIR3YKL163W TIF11P38912 153 aaKnown RBP8.34□□□□□ -1.07
PIR3YKL163W RTG3P38165 486 aa8.32□□□□□ -1.08
PIR3YKL163W YFR006WP43590 535 aa8.32□□□□□ -1.08
PIR3YKL163W DBP1P24784 617 aaKnown RBP8.31□□□□□ -1.08
PIR3YKL163W RCR1P38212 213 aa8.31□□□□□ -1.08
PIR3YKL163W YMR1P47147 688 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
PIR3YKL163W STS1P38637 319 aa8.28□□□□□ -1.08
PIR3YKL163W ULI1P43604 169 aa8.26□□□□□ -1.09
PIR3YKL163W AIR2Q12476 344 aaKnown RBP8.24□□□□□ -1.09
PIR3YKL163W LDB19Q12502 818 aa8.24□□□□□ -1.09
PIR3YKL163W FKH1P40466 484 aa8.23□□□□□ -1.09
PIR3YKL163W SET4P42948 560 aa8.23□□□□□ -1.09
PIR3YKL163W IOC2Q12072 812 aa8.23□□□□□ -1.09
PIR3YKL163W YOL036WQ08206 761 aa8.21□□□□□ -1.1
PIR3YKL163W VMA1P17255 1071 aaKnown RBP8.2□□□□□ -1.1
PIR3YKL163W MSB4Q12317 492 aa8.18□□□□□ -1.1
PIR3YKL163W YJL171CP46992 396 aa8.15□□□□□ -1.1
PIR3YKL163W TRP5P00931 707 aaKnown RBP8.14□□□□□ -1.11
PIR3YKL163W EAP1P36041 632 aaKnown RBP8.13□□□□□ -1.11
PIR3YKL163W SAM3Q08986 587 aa8.12□□□□□ -1.11
PIR3YKL163W RTG1P32607 177 aa8.09□□□□□ -1.11
PIR3YKL163W BMT6Q12291 365 aa8.04□□□□□ -1.12
PIR3YKL163W GYP5Q12344 894 aa8.03□□□□□ -1.12
PIR3YKL163W YNL035CP53962 389 aaKnown RBP8.02□□□□□ -1.13
PIR3YKL163W NCR1Q12200 1170 aa8.02□□□□□ -1.13
PIR3YKL163W RAM2P29703 316 aa8.01□□□□□ -1.13
PIR3YKL163W DCW1P36091 449 aa8□□□□□ -1.13
PIR3YKL163W SEC61P32915 480 aa7.97□□□□□ -1.13
PIR3YKL163W RQC2Q12532 1038 aaKnown RBP7.97□□□□□ -1.13
PIR3YKL163W MIF2P35201 549 aa7.96□□□□□ -1.14
PIR3YKL163W HTA1P04911 132 aaKnown RBP7.95□□□□□ -1.14
PIR3YKL163W HTA2P04912 132 aa7.95□□□□□ -1.14
PIR3YKL163W DAN4P47179 1161 aa7.95□□□□□ -1.14
PIR3YKL163W MAK11P20484 414 aaKnown RBP7.94□□□□□ -1.14
PIR3YKL163W EDS1P38073 919 aa7.93□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms