RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeastyeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT3YKL146W SGS1P35187 1447 aa9.38□□□□□ -0.91
AVT3YKL146W INO80P53115 1489 aa9.24□□□□□ -0.93
AVT3YKL146W MON2P48563 1636 aaPredicted RBP9.19□□□□□ -0.94
AVT3YKL146W TCB3Q03640 1545 aaKnown RBP9.19□□□□□ -0.94
AVT3YKL146W TY1B-DR4Q07793 1604 aa9.09□□□□□ -0.95
AVT3YKL146W DRS1P32892 752 aaKnown RBP9.03□□□□□ -0.96
AVT3YKL146W SWR1Q05471 1514 aa8.95□□□□□ -0.98
AVT3YKL146W HSL1P34244 1518 aa8.88□□□□□ -0.99
AVT3YKL146W SSN2P38931 1420 aa8.87□□□□□ -0.99
AVT3YKL146W SPT6P23615 1451 aaKnown RBP8.86□□□□□ -0.99
AVT3YKL146W SPA2P23201 1466 aaKnown RBP8.86□□□□□ -0.99
AVT3YKL146W DNA2P38859 1522 aa8.76□□□□□ -1.01
AVT3YKL146W HIR3P47171 1648 aa8.72□□□□□ -1.01
AVT3YKL146W KOG1P38873 1557 aa8.71□□□□□ -1.01
AVT3YKL146W XRN1P22147 1528 aaKnown RBP8.64□□□□□ -1.03
AVT3YKL146W REV3P14284 1504 aa8.5□□□□□ -1.05
AVT3YKL146W THO2P53552 1597 aaKnown RBP8.49□□□□□ -1.05
AVT3YKL146W ECM5Q03214 1411 aa8.48□□□□□ -1.05
AVT3YKL146W BUD4P47136 1447 aa8.47□□□□□ -1.05
AVT3YKL146W SIN3P22579 1536 aa8.43□□□□□ -1.06
AVT3YKL146W TAF2P23255 1407 aa8.41□□□□□ -1.06
AVT3YKL146W MTC1P47018 478 aaKnown RBP8.39□□□□□ -1.07
AVT3YKL146W SSK2P53599 1579 aa8.38□□□□□ -1.07
AVT3YKL146W ATG2P53855 1592 aa8.36□□□□□ -1.07
AVT3YKL146W TFA1P36100 482 aa8.34□□□□□ -1.07
AVT3YKL146W ESP1Q03018 1630 aa8.34□□□□□ -1.08
AVT3YKL146W MDS3P53094 1487 aa8.33□□□□□ -1.08
AVT3YKL146W SKI3P17883 1432 aaKnown RBP8.31□□□□□ -1.08
AVT3YKL146W PEP1P32319 1579 aa8.31□□□□□ -1.08
AVT3YKL146W MYO2P19524 1574 aaKnown RBP8.28□□□□□ -1.08
AVT3YKL146W RSE1Q04693 1361 aaKnown RBP8.2□□□□□ -1.1
AVT3YKL146W YPK9Q12697 1472 aa8.2□□□□□ -1.1
AVT3YKL146W SCC2Q04002 1493 aa8.14□□□□□ -1.11
AVT3YKL146W UFD4P33202 1483 aa8.12□□□□□ -1.11
AVT3YKL146W POL1P13382 1468 aa8.11□□□□□ -1.11
AVT3YKL146W BFR2Q06631 534 aaKnown RBP8.1□□□□□ -1.11
AVT3YKL146W BPT1P14772 1559 aa8.1□□□□□ -1.11
AVT3YKL146W RPO31P04051 1460 aa8.09□□□□□ -1.11
AVT3YKL146W STU1P38198 1513 aa8.07□□□□□ -1.12
AVT3YKL146W RKR1Q04781 1562 aa8.06□□□□□ -1.12
AVT3YKL146W TY2B-LR1P0C2J3 1770 aa8.04□□□□□ -1.12
AVT3YKL146W TY2B-FP0CX63 1770 aa8.04□□□□□ -1.12
AVT3YKL146W TY2B-GR2P0CX64 1770 aa8.04□□□□□ -1.12
AVT3YKL146W TY2B-CP25384 1770 aa8.04□□□□□ -1.12
AVT3YKL146W TY2B-DR2Q03494 1770 aa8.04□□□□□ -1.12
AVT3YKL146W TY1B-DR1Q03855 1755 aa8.04□□□□□ -1.12
AVT3YKL146W TY2B-DR3Q07791 1770 aaKnown RBP8.04□□□□□ -1.12
AVT3YKL146W TY2B-OR1Q12113 1770 aa8.04□□□□□ -1.12
AVT3YKL146W TY2B-DR1Q12472 1770 aa8.04□□□□□ -1.12
AVT3YKL146W TY2B-OR2Q12501 1770 aa8.04□□□□□ -1.12
AVT3YKL146W YCF1P39109 1515 aaKnown RBP8.03□□□□□ -1.12
AVT3YKL146W TOP2P06786 1428 aaKnown RBP8.03□□□□□ -1.12
AVT3YKL146W YOR1P53049 1477 aa8.01□□□□□ -1.13
AVT3YKL146W YTA7P40340 1379 aa7.99□□□□□ -1.13
AVT3YKL146W TY1B-DR3Q99231 1755 aa7.98□□□□□ -1.13
AVT3YKL146W SMC4Q12267 1418 aa7.97□□□□□ -1.13
AVT3YKL146W RQC2Q12532 1038 aaKnown RBP7.96□□□□□ -1.13
AVT3YKL146W TY2B-BQ12491 1770 aa7.96□□□□□ -1.13
AVT3YKL146W TY1B-BRQ12193 1756 aa7.94□□□□□ -1.14
AVT3YKL146W TY1B-GR3Q12316 1755 aa7.94□□□□□ -1.14
AVT3YKL146W TY1B-ORQ92393 1755 aa7.94□□□□□ -1.14
AVT3YKL146W CDC25P04821 1589 aa7.92□□□□□ -1.14
AVT3YKL146W CHD1P32657 1468 aa7.91□□□□□ -1.14
AVT3YKL146W TY1B-HO13535 1793 aa7.91□□□□□ -1.14
AVT3YKL146W TY1B-DR5P0C2I2 1755 aa7.91□□□□□ -1.14
AVT3YKL146W TY1B-DR6P0C2I3 1755 aa7.91□□□□□ -1.14
AVT3YKL146W TY1B-LR2P0C2I5 1755 aa7.91□□□□□ -1.14
AVT3YKL146W TY1B-LR3P0C2I6 1755 aaKnown RBP7.91□□□□□ -1.14
AVT3YKL146W TY1B-PR1P0C2I9 1755 aaKnown RBP7.91□□□□□ -1.14
AVT3YKL146W TY1B-PR2P0C2J0 1756 aa7.91□□□□□ -1.14
AVT3YKL146W TY1B-PR3P0C2J1 1755 aaKnown RBP7.91□□□□□ -1.14
AVT3YKL146W TY1B-JR1P47098 1755 aa7.91□□□□□ -1.14
AVT3YKL146W TY1B-ML2Q03434 1755 aaKnown RBP7.91□□□□□ -1.14
AVT3YKL146W TY1B-ER1Q03612 1755 aa7.91□□□□□ -1.14
AVT3YKL146W TY1B-ML1Q04711 1755 aaKnown RBP7.91□□□□□ -1.14
AVT3YKL146W TY1B-GR2Q12269 1755 aa7.91□□□□□ -1.14
AVT3YKL146W TY1B-OLQ12273 1755 aa7.91□□□□□ -1.14
AVT3YKL146W TY1B-PLQ12414 1755 aaKnown RBP7.91□□□□□ -1.14
AVT3YKL146W MYO4P32492 1471 aa7.91□□□□□ -1.14
AVT3YKL146W MMS22Q06164 1454 aa7.89□□□□□ -1.15
AVT3YKL146W PAN1P32521 1480 aa7.87□□□□□ -1.15
AVT3YKL146W ESC1Q03661 1658 aaKnown RBP7.87□□□□□ -1.15
AVT3YKL146W SAS10Q12136 610 aaPredicted RBP7.87□□□□□ -1.15
AVT3YKL146W SPP41P38904 1435 aa7.86□□□□□ -1.15
AVT3YKL146W TSC11P40061 1430 aa7.8□□□□□ -1.16
AVT3YKL146W DNF1P32660 1571 aa7.79□□□□□ -1.16
AVT3YKL146W SNQ2P32568 1501 aaKnown RBP7.79□□□□□ -1.16
AVT3YKL146W VTH1P40438 1549 aa7.79□□□□□ -1.16
AVT3YKL146W VTH2P40890 1549 aa7.79□□□□□ -1.16
AVT3YKL146W RPA190P10964 1664 aaKnown RBP7.79□□□□□ -1.16
AVT3YKL146W TRM732Q03496 1420 aa7.78□□□□□ -1.16
AVT3YKL146W STH1P32597 1359 aa7.78□□□□□ -1.16
AVT3YKL146W TY1B-JR2P47100 1755 aaKnown RBP7.78□□□□□ -1.16
AVT3YKL146W TY1B-ER2Q03619 1755 aa7.78□□□□□ -1.16
AVT3YKL146W TY1B-MR1Q04214 1755 aa7.78□□□□□ -1.16
AVT3YKL146W TY1B-MR2Q04670 1755 aaKnown RBP7.78□□□□□ -1.16
AVT3YKL146W TY1B-LR1Q12088 1755 aaKnown RBP7.78□□□□□ -1.16
AVT3YKL146W TY1B-NL1Q12112 1755 aa7.78□□□□□ -1.16
AVT3YKL146W TY1B-GR1Q12141 1755 aa7.78□□□□□ -1.16
AVT3YKL146W TY1B-BLQ12490 1755 aa7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms