RNA–Protein interactions for RNA: YKL143W

LTV1, Transcript of Component of the GSE complex, yeastyeast

Gene LTV1, Length 1,392 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LTV1YKL143W MTC1P47018 478 aaKnown RBP14.22□□□□□ -0.13
LTV1YKL143W FAP1P53971 965 aa13.69□□□□□ -0.22
LTV1YKL143W PRY3P47033 881 aa12.86□□□□□ -0.35
LTV1YKL143W DRS1P32892 752 aaKnown RBP12.58□□□□□ -0.4
LTV1YKL143W AAD16Q02895 342 aa12.43□□□□□ -0.42
LTV1YKL143W PRI1P10363 409 aa12.39□□□□□ -0.43
LTV1YKL143W HAA1Q12753 694 aaKnown RBP12.03□□□□□ -0.48
LTV1YKL143W YCK3P39962 524 aa11.99□□□□□ -0.49
LTV1YKL143W ISW2Q08773 1120 aa11.99□□□□□ -0.49
LTV1YKL143W RPG1P38249 964 aaKnown RBP11.87□□□□□ -0.51
LTV1YKL143W TSR3Q12094 313 aaKnown RBP11.68□□□□□ -0.54
LTV1YKL143W DIP2Q12220 943 aaPredicted RBP11.29□□□□□ -0.6
LTV1YKL143W MRPL32P25348 183 aa11.28□□□□□ -0.6
LTV1YKL143W RSE1Q04693 1361 aaKnown RBP11.13□□□□□ -0.63
LTV1YKL143W YGL015CP33199 130 aa11.02□□□□□ -0.65
LTV1YKL143W REB1P21538 810 aa10.88□□□□□ -0.67
LTV1YKL143W RPL17AP05740 184 aaKnown RBP10.82□□□□□ -0.68
LTV1YKL143W RPL17BP46990 184 aaKnown RBP10.82□□□□□ -0.68
LTV1YKL143W AVT3P36062 692 aa10.64□□□□□ -0.71
LTV1YKL143W CDC27P38042 758 aa10.51□□□□□ -0.73
LTV1YKL143W BUD31P25337 157 aaPredicted RBP10.37□□□□□ -0.75
LTV1YKL143W UBP10P53874 792 aaPredicted RBP10.33□□□□□ -0.76
LTV1YKL143W YKR023WP36119 530 aaKnown RBP10.3□□□□□ -0.76
LTV1YKL143W MAP2P38174 421 aaKnown RBP10.28□□□□□ -0.76
LTV1YKL143W SPT21P35209 758 aa10.22□□□□□ -0.77
LTV1YKL143W HOP09932 586 aa10.13□□□□□ -0.79
LTV1YKL143W BFR2Q06631 534 aaKnown RBP10.13□□□□□ -0.79
LTV1YKL143W TFC8Q12308 588 aa10.11□□□□□ -0.79
LTV1YKL143W DCD1P06773 312 aa10.09□□□□□ -0.79
LTV1YKL143W TIF4632P39936 914 aaKnown RBP9.97□□□□□ -0.81
LTV1YKL143W SCY1P53009 804 aa9.97□□□□□ -0.81
LTV1YKL143W SLX5P32828 619 aaKnown RBP9.9□□□□□ -0.82
LTV1YKL143W TGL3P40308 642 aa9.9□□□□□ -0.82
LTV1YKL143W UBP9P39967 754 aa9.87□□□□□ -0.83
LTV1YKL143W SIS1P25294 352 aaKnown RBP9.86□□□□□ -0.83
LTV1YKL143W BCH2P36122 765 aa9.75□□□□□ -0.85
LTV1YKL143W RIM101P33400 625 aa9.75□□□□□ -0.85
LTV1YKL143W EPS1P40557 701 aa9.46□□□□□ -0.9
LTV1YKL143W BDF1P35817 686 aa9.44□□□□□ -0.9
LTV1YKL143W OXP1P28273 1286 aa9.37□□□□□ -0.91
LTV1YKL143W MST1P07236 462 aa9.37□□□□□ -0.91
LTV1YKL143W YOR238WQ08634 303 aa9.36□□□□□ -0.91
LTV1YKL143W PTP3P40048 928 aa9.35□□□□□ -0.91
LTV1YKL143W YIL055CP40523 627 aaKnown RBP9.35□□□□□ -0.91
LTV1YKL143W YBL029C-AQ3E756 94 aa9.35□□□□□ -0.91
LTV1YKL143W VNX1P42839 908 aa9.23□□□□□ -0.93
LTV1YKL143W BBC1P47068 1157 aa9.23□□□□□ -0.93
LTV1YKL143W NSR1P27476 414 aaKnown RBP RIP-Chip data9.2□□□□□ -0.94not detected
LTV1YKL143W YAP5P40574 245 aa9.18□□□□□ -0.94
LTV1YKL143W SPP1Q03012 353 aa9.17□□□□□ -0.94
LTV1YKL143W RSM7P47150 247 aa9.16□□□□□ -0.94
LTV1YKL143W TFA1P36100 482 aa9.13□□□□□ -0.95
LTV1YKL143W WSC3Q12215 556 aa9.13□□□□□ -0.95
LTV1YKL143W AI2P03876 854 aa9.12□□□□□ -0.95
LTV1YKL143W YAH1Q12184 172 aaKnown RBP9.07□□□□□ -0.96
LTV1YKL143W YJL171CP46992 396 aa9.04□□□□□ -0.96
LTV1YKL143W GTT3P39996 337 aa9.03□□□□□ -0.96
LTV1YKL143W TIF11P38912 153 aaKnown RBP9.01□□□□□ -0.97
LTV1YKL143W AIR2Q12476 344 aaKnown RBP8.99□□□□□ -0.97
LTV1YKL143W FKH1P40466 484 aa8.95□□□□□ -0.98
LTV1YKL143W ULI1P43604 169 aa8.88□□□□□ -0.99
LTV1YKL143W LDB19Q12502 818 aa8.87□□□□□ -0.99
LTV1YKL143W PIB1Q06651 286 aa8.86□□□□□ -0.99
LTV1YKL143W YLR271WQ06152 274 aa8.84□□□□□ -0.99
LTV1YKL143W BMT6Q12291 365 aa8.83□□□□□ -1
LTV1YKL143W IOC2Q12072 812 aa8.82□□□□□ -1
LTV1YKL143W PSD2P53037 1138 aaKnown RBP8.77□□□□□ -1.01
LTV1YKL143W MRM1P25270 412 aa8.76□□□□□ -1.01
LTV1YKL143W EAP1P36041 632 aaKnown RBP8.74□□□□□ -1.01
LTV1YKL143W MSB4Q12317 492 aa8.74□□□□□ -1.01
LTV1YKL143W RTG1P32607 177 aa8.67□□□□□ -1.02
LTV1YKL143W SET4P42948 560 aa8.67□□□□□ -1.02
LTV1YKL143W YOL036WQ08206 761 aa8.65□□□□□ -1.02
LTV1YKL143W NCR1Q12200 1170 aa8.65□□□□□ -1.02
LTV1YKL143W TRP5P00931 707 aaKnown RBP8.63□□□□□ -1.03
LTV1YKL143W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
LTV1YKL143W YMR1P47147 688 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
LTV1YKL143W DBP1P24784 617 aaKnown RBP8.6□□□□□ -1.03
LTV1YKL143W YNL035CP53962 389 aaKnown RBP8.59□□□□□ -1.03
LTV1YKL143W SSP1P38871 571 aa8.58□□□□□ -1.04
LTV1YKL143W SEC61P32915 480 aa8.57□□□□□ -1.04
LTV1YKL143W YFR006WP43590 535 aa8.56□□□□□ -1.04
LTV1YKL143W RTG3P38165 486 aa8.55□□□□□ -1.04
LTV1YKL143W VPS29P38759 282 aa8.55□□□□□ -1.04
LTV1YKL143W TFG1P41895 735 aaPredicted RBP8.53□□□□□ -1.04
LTV1YKL143W VMA1P17255 1071 aaKnown RBP8.52□□□□□ -1.05
LTV1YKL143W CST9Q06032 482 aa8.48□□□□□ -1.05
LTV1YKL143W SAM3Q08986 587 aa8.48□□□□□ -1.05
LTV1YKL143W STS1P38637 319 aa8.48□□□□□ -1.05
LTV1YKL143W MGA2P40578 1113 aa8.45□□□□□ -1.06
LTV1YKL143W SAP30P38429 201 aa8.43□□□□□ -1.06
LTV1YKL143W JIP4Q03361 876 aa8.42□□□□□ -1.06
LTV1YKL143W ABP1P15891 592 aaKnown RBP8.38□□□□□ -1.07
LTV1YKL143W DAN4P47179 1161 aa8.38□□□□□ -1.07
LTV1YKL143W GYP5Q12344 894 aa8.38□□□□□ -1.07
LTV1YKL143W BCK2P33306 851 aa8.36□□□□□ -1.07
LTV1YKL143W YDL129WQ07555 291 aa8.36□□□□□ -1.07
LTV1YKL143W CHL1P22516 861 aaPredicted RBP8.35□□□□□ -1.07
LTV1YKL143W HTA1P04911 132 aaKnown RBP8.35□□□□□ -1.07
LTV1YKL143W HTA2P04912 132 aa8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms