RNA–Protein interactions for RNA: YKL119C

VPH2, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VPH2, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPH2YKL119C MTC1P47018 478 aaKnown RBP13.69□□□□□ -0.22
VPH2YKL119C DRS1P32892 752 aaKnown RBP12.71□□□□□ -0.37
VPH2YKL119C FAP1P53971 965 aa12.51□□□□□ -0.41
VPH2YKL119C PRY3P47033 881 aa11.76□□□□□ -0.53
VPH2YKL119C PRI1P10363 409 aa11.59□□□□□ -0.55
VPH2YKL119C AAD16Q02895 342 aa11.55□□□□□ -0.56
VPH2YKL119C ISW2Q08773 1120 aa11.37□□□□□ -0.59
VPH2YKL119C RPG1P38249 964 aaKnown RBP11.28□□□□□ -0.6
VPH2YKL119C DIP2Q12220 943 aaPredicted RBP11.16□□□□□ -0.62
VPH2YKL119C YCK3P39962 524 aa11.07□□□□□ -0.64
VPH2YKL119C TSR3Q12094 313 aaKnown RBP11□□□□□ -0.65
VPH2YKL119C HAA1Q12753 694 aaKnown RBP10.96□□□□□ -0.65
VPH2YKL119C RSE1Q04693 1361 aaKnown RBP10.82□□□□□ -0.68
VPH2YKL119C AVT3P36062 692 aa10.7□□□□□ -0.7
VPH2YKL119C MRPL32P25348 183 aa10.54□□□□□ -0.72
VPH2YKL119C RPL17AP05740 184 aaKnown RBP10.51□□□□□ -0.73
VPH2YKL119C RPL17BP46990 184 aaKnown RBP10.51□□□□□ -0.73
VPH2YKL119C BFR2Q06631 534 aaKnown RBP10.51□□□□□ -0.73
VPH2YKL119C REB1P21538 810 aa10.47□□□□□ -0.73
VPH2YKL119C YGL015CP33199 130 aa10.11□□□□□ -0.79
VPH2YKL119C SPT21P35209 758 aa10.01□□□□□ -0.81
VPH2YKL119C CDC27P38042 758 aa10.01□□□□□ -0.81
VPH2YKL119C YKR023WP36119 530 aaKnown RBP9.94□□□□□ -0.82
VPH2YKL119C HOP09932 586 aa9.77□□□□□ -0.85
VPH2YKL119C DCD1P06773 312 aa9.76□□□□□ -0.85
VPH2YKL119C TFC8Q12308 588 aa9.73□□□□□ -0.85
VPH2YKL119C MAP2P38174 421 aaKnown RBP9.72□□□□□ -0.85
VPH2YKL119C UBP10P53874 792 aaPredicted RBP9.69□□□□□ -0.86
VPH2YKL119C RIM101P33400 625 aa9.62□□□□□ -0.87
VPH2YKL119C SCY1P53009 804 aa9.51□□□□□ -0.89
VPH2YKL119C BCH2P36122 765 aa9.41□□□□□ -0.9
VPH2YKL119C SLX5P32828 619 aaKnown RBP9.36□□□□□ -0.91
VPH2YKL119C BUD31P25337 157 aaPredicted RBP9.32□□□□□ -0.92
VPH2YKL119C OXP1P28273 1286 aa9.32□□□□□ -0.92
VPH2YKL119C TIF4632P39936 914 aaKnown RBP9.31□□□□□ -0.92
VPH2YKL119C TGL3P40308 642 aa9.24□□□□□ -0.93
VPH2YKL119C PTP3P40048 928 aa9.21□□□□□ -0.94
VPH2YKL119C YIL055CP40523 627 aaKnown RBP9.19□□□□□ -0.94
VPH2YKL119C EPS1P40557 701 aa9.18□□□□□ -0.94
VPH2YKL119C BDF1P35817 686 aa9.14□□□□□ -0.95
VPH2YKL119C TFA1P36100 482 aa9.09□□□□□ -0.95
VPH2YKL119C YAH1Q12184 172 aaKnown RBP9.08□□□□□ -0.96
VPH2YKL119C RSM7P47150 247 aa9.04□□□□□ -0.96
VPH2YKL119C UBP9P39967 754 aa9□□□□□ -0.97
VPH2YKL119C AI2P03876 854 aa8.98□□□□□ -0.97
VPH2YKL119C BBC1P47068 1157 aa8.98□□□□□ -0.97
VPH2YKL119C SIS1P25294 352 aaKnown RBP8.9□□□□□ -0.98
VPH2YKL119C YLR271WQ06152 274 aa8.88□□□□□ -0.99
VPH2YKL119C YOR238WQ08634 303 aa8.84□□□□□ -0.99
VPH2YKL119C MST1P07236 462 aa8.82□□□□□ -1
VPH2YKL119C NSR1P27476 414 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
VPH2YKL119C YBL029C-AQ3E756 94 aa8.78□□□□□ -1
VPH2YKL119C YAP5P40574 245 aa8.76□□□□□ -1.01
VPH2YKL119C PSD2P53037 1138 aaKnown RBP8.74□□□□□ -1.01
VPH2YKL119C SSP1P38871 571 aa8.73□□□□□ -1.01
VPH2YKL119C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
VPH2YKL119C MRM1P25270 412 aa8.66□□□□□ -1.02
VPH2YKL119C VNX1P42839 908 aa8.65□□□□□ -1.02
VPH2YKL119C WSC3Q12215 556 aa8.65□□□□□ -1.02
VPH2YKL119C PIB1Q06651 286 aa8.62□□□□□ -1.03
VPH2YKL119C GTT3P39996 337 aa8.6□□□□□ -1.03
VPH2YKL119C SPP1Q03012 353 aa8.58□□□□□ -1.04
VPH2YKL119C CST9Q06032 482 aa8.58□□□□□ -1.04
VPH2YKL119C MGA2P40578 1113 aa8.52□□□□□ -1.05
VPH2YKL119C TIF11P38912 153 aaKnown RBP8.48□□□□□ -1.05
VPH2YKL119C VPS29P38759 282 aa8.45□□□□□ -1.06
VPH2YKL119C RTG3P38165 486 aa8.44□□□□□ -1.06
VPH2YKL119C YFR006WP43590 535 aa8.43□□□□□ -1.06
VPH2YKL119C YMR1P47147 688 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
VPH2YKL119C DBP1P24784 617 aaKnown RBP8.42□□□□□ -1.06
VPH2YKL119C RCR1P38212 213 aa8.4□□□□□ -1.06
VPH2YKL119C ULI1P43604 169 aa8.4□□□□□ -1.06
VPH2YKL119C STS1P38637 319 aa8.38□□□□□ -1.07
VPH2YKL119C FKH1P40466 484 aa8.38□□□□□ -1.07
VPH2YKL119C LDB19Q12502 818 aa8.38□□□□□ -1.07
VPH2YKL119C AIR2Q12476 344 aaKnown RBP8.37□□□□□ -1.07
VPH2YKL119C SET4P42948 560 aa8.35□□□□□ -1.07
VPH2YKL119C YOL036WQ08206 761 aa8.35□□□□□ -1.07
VPH2YKL119C IOC2Q12072 812 aa8.35□□□□□ -1.07
VPH2YKL119C MSB4Q12317 492 aa8.34□□□□□ -1.07
VPH2YKL119C VMA1P17255 1071 aaKnown RBP8.32□□□□□ -1.08
VPH2YKL119C YJL171CP46992 396 aa8.31□□□□□ -1.08
VPH2YKL119C EAP1P36041 632 aaKnown RBP8.28□□□□□ -1.08
VPH2YKL119C TRP5P00931 707 aaKnown RBP8.26□□□□□ -1.09
VPH2YKL119C SAM3Q08986 587 aa8.24□□□□□ -1.09
VPH2YKL119C RTG1P32607 177 aa8.22□□□□□ -1.09
VPH2YKL119C BMT6Q12291 365 aa8.2□□□□□ -1.1
VPH2YKL119C YNL035CP53962 389 aaKnown RBP8.16□□□□□ -1.1
VPH2YKL119C GYP5Q12344 894 aa8.15□□□□□ -1.1
VPH2YKL119C NCR1Q12200 1170 aa8.14□□□□□ -1.11
VPH2YKL119C SEC61P32915 480 aa8.11□□□□□ -1.11
VPH2YKL119C DCW1P36091 449 aa8.11□□□□□ -1.11
VPH2YKL119C RAM2P29703 316 aa8.09□□□□□ -1.11
VPH2YKL119C HTA1P04911 132 aaKnown RBP8.08□□□□□ -1.12
VPH2YKL119C HTA2P04912 132 aa8.08□□□□□ -1.12
VPH2YKL119C ABP1P15891 592 aaKnown RBP8.08□□□□□ -1.12
VPH2YKL119C MIF2P35201 549 aa8.06□□□□□ -1.12
VPH2YKL119C MAK11P20484 414 aaKnown RBP8.05□□□□□ -1.12
VPH2YKL119C TFG1P41895 735 aaPredicted RBP8.05□□□□□ -1.12
VPH2YKL119C DAN4P47179 1161 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms