RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W MTC1P47018 478 aaKnown RBP14.58□□□□□ -0.08
VMA5YKL080W FAP1P53971 965 aa13.46□□□□□ -0.25
VMA5YKL080W DRS1P32892 752 aaKnown RBP13.23□□□□□ -0.29
VMA5YKL080W PRY3P47033 881 aa12.7□□□□□ -0.38
VMA5YKL080W PRI1P10363 409 aa12.51□□□□□ -0.41
VMA5YKL080W AAD16Q02895 342 aa12.45□□□□□ -0.42
VMA5YKL080W YCK3P39962 524 aa12.15□□□□□ -0.46
VMA5YKL080W ISW2Q08773 1120 aa12.09□□□□□ -0.47
VMA5YKL080W RPG1P38249 964 aaKnown RBP12.05□□□□□ -0.48
VMA5YKL080W HAA1Q12753 694 aaKnown RBP11.88□□□□□ -0.51
VMA5YKL080W TSR3Q12094 313 aaKnown RBP11.82□□□□□ -0.52
VMA5YKL080W DIP2Q12220 943 aaPredicted RBP11.76□□□□□ -0.53
VMA5YKL080W RSE1Q04693 1361 aaKnown RBP11.42□□□□□ -0.58
VMA5YKL080W MRPL32P25348 183 aa11.28□□□□□ -0.6
VMA5YKL080W AVT3P36062 692 aa11.26□□□□□ -0.61
VMA5YKL080W RPL17AP05740 184 aaKnown RBP11.12□□□□□ -0.63
VMA5YKL080W RPL17BP46990 184 aaKnown RBP11.12□□□□□ -0.63
VMA5YKL080W REB1P21538 810 aa11.04□□□□□ -0.64
VMA5YKL080W YGL015CP33199 130 aa10.93□□□□□ -0.66
VMA5YKL080W BFR2Q06631 534 aaKnown RBP10.86□□□□□ -0.67
VMA5YKL080W CDC27P38042 758 aa10.76□□□□□ -0.69
VMA5YKL080W SPT21P35209 758 aa10.67□□□□□ -0.7
VMA5YKL080W YKR023WP36119 530 aaKnown RBP10.64□□□□□ -0.71
VMA5YKL080W MAP2P38174 421 aaKnown RBP10.43□□□□□ -0.74
VMA5YKL080W UBP10P53874 792 aaPredicted RBP10.41□□□□□ -0.74
VMA5YKL080W HOP09932 586 aa10.4□□□□□ -0.74
VMA5YKL080W TFC8Q12308 588 aa10.4□□□□□ -0.74
VMA5YKL080W DCD1P06773 312 aa10.38□□□□□ -0.75
VMA5YKL080W RIM101P33400 625 aa10.21□□□□□ -0.77
VMA5YKL080W BUD31P25337 157 aaPredicted RBP10.2□□□□□ -0.78
VMA5YKL080W SCY1P53009 804 aa10.14□□□□□ -0.79
VMA5YKL080W BCH2P36122 765 aa10.06□□□□□ -0.8
VMA5YKL080W SLX5P32828 619 aaKnown RBP10□□□□□ -0.81
VMA5YKL080W TGL3P40308 642 aa9.96□□□□□ -0.82
VMA5YKL080W TIF4632P39936 914 aaKnown RBP9.94□□□□□ -0.82
VMA5YKL080W OXP1P28273 1286 aa9.89□□□□□ -0.83
VMA5YKL080W EPS1P40557 701 aa9.75□□□□□ -0.85
VMA5YKL080W BDF1P35817 686 aa9.74□□□□□ -0.85
VMA5YKL080W TFA1P36100 482 aa9.73□□□□□ -0.85
VMA5YKL080W UBP9P39967 754 aa9.69□□□□□ -0.86
VMA5YKL080W SIS1P25294 352 aaKnown RBP9.63□□□□□ -0.87
VMA5YKL080W PTP3P40048 928 aa9.62□□□□□ -0.87
VMA5YKL080W YIL055CP40523 627 aaKnown RBP9.62□□□□□ -0.87
VMA5YKL080W MST1P07236 462 aa9.55□□□□□ -0.88
VMA5YKL080W RSM7P47150 247 aa9.53□□□□□ -0.88
VMA5YKL080W AI2P03876 854 aa9.47□□□□□ -0.89
VMA5YKL080W YAH1Q12184 172 aaKnown RBP9.47□□□□□ -0.89
VMA5YKL080W YOR238WQ08634 303 aa9.44□□□□□ -0.9
VMA5YKL080W BBC1P47068 1157 aa9.43□□□□□ -0.9
VMA5YKL080W YBL029C-AQ3E756 94 aa9.42□□□□□ -0.9
VMA5YKL080W NSR1P27476 414 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
VMA5YKL080W YLR271WQ06152 274 aa9.35□□□□□ -0.91
VMA5YKL080W YAP5P40574 245 aa9.32□□□□□ -0.92
VMA5YKL080W VNX1P42839 908 aa9.32□□□□□ -0.92
VMA5YKL080W PSD2P53037 1138 aaKnown RBP9.24□□□□□ -0.93
VMA5YKL080W WSC3Q12215 556 aa9.21□□□□□ -0.94
VMA5YKL080W SPP1Q03012 353 aa9.18□□□□□ -0.94
VMA5YKL080W MRM1P25270 412 aa9.12□□□□□ -0.95
VMA5YKL080W PIB1Q06651 286 aa9.1□□□□□ -0.95
VMA5YKL080W SSP1P38871 571 aa9.09□□□□□ -0.95
VMA5YKL080W TIF11P38912 153 aaKnown RBP9.09□□□□□ -0.95
VMA5YKL080W GTT3P39996 337 aa9.07□□□□□ -0.96
VMA5YKL080W AIR2Q12476 344 aaKnown RBP9.07□□□□□ -0.96
VMA5YKL080W FKH1P40466 484 aa9.03□□□□□ -0.96
VMA5YKL080W CST9Q06032 482 aa9□□□□□ -0.97
VMA5YKL080W ARP8Q12386 881 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
VMA5YKL080W IOC2Q12072 812 aa8.99□□□□□ -0.97
VMA5YKL080W VPS29P38759 282 aa8.98□□□□□ -0.97
VMA5YKL080W ULI1P43604 169 aa8.98□□□□□ -0.97
VMA5YKL080W LDB19Q12502 818 aa8.95□□□□□ -0.98
VMA5YKL080W DBP1P24784 617 aaKnown RBP8.9□□□□□ -0.98
VMA5YKL080W MGA2P40578 1113 aa8.9□□□□□ -0.98
VMA5YKL080W YJL171CP46992 396 aa8.9□□□□□ -0.98
VMA5YKL080W YMR1P47147 688 aaKnown RBP RIP-Chip data8.9□□□□□ -0.98not detected
VMA5YKL080W YFR006WP43590 535 aa8.88□□□□□ -0.99
VMA5YKL080W MSB4Q12317 492 aa8.88□□□□□ -0.99
VMA5YKL080W STS1P38637 319 aa8.87□□□□□ -0.99
VMA5YKL080W YOL036WQ08206 761 aa8.87□□□□□ -0.99
VMA5YKL080W RTG3P38165 486 aa8.86□□□□□ -0.99
VMA5YKL080W SET4P42948 560 aa8.85□□□□□ -0.99
VMA5YKL080W RCR1P38212 213 aa8.84□□□□□ -0.99
VMA5YKL080W TRP5P00931 707 aaKnown RBP8.81□□□□□ -1
VMA5YKL080W VMA1P17255 1071 aaKnown RBP8.81□□□□□ -1
VMA5YKL080W EAP1P36041 632 aaKnown RBP8.81□□□□□ -1
VMA5YKL080W SAM3Q08986 587 aa8.79□□□□□ -1
VMA5YKL080W BMT6Q12291 365 aa8.79□□□□□ -1
VMA5YKL080W RTG1P32607 177 aa8.77□□□□□ -1.01
VMA5YKL080W NCR1Q12200 1170 aa8.72□□□□□ -1.01
VMA5YKL080W YNL035CP53962 389 aaKnown RBP8.71□□□□□ -1.02
VMA5YKL080W SEC61P32915 480 aa8.67□□□□□ -1.02
VMA5YKL080W DAN4P47179 1161 aa8.64□□□□□ -1.03
VMA5YKL080W GYP5Q12344 894 aa8.61□□□□□ -1.03
VMA5YKL080W DCW1P36091 449 aa8.57□□□□□ -1.04
VMA5YKL080W JIP4Q03361 876 aa8.56□□□□□ -1.04
VMA5YKL080W ABP1P15891 592 aaKnown RBP8.54□□□□□ -1.04
VMA5YKL080W HTA1P04911 132 aaKnown RBP8.53□□□□□ -1.04
VMA5YKL080W HTA2P04912 132 aa8.53□□□□□ -1.04
VMA5YKL080W SAP30P38429 201 aa8.53□□□□□ -1.04
VMA5YKL080W PTC4P38089 393 aa8.51□□□□□ -1.05
VMA5YKL080W YEL023CP39992 682 aa8.5□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms