RNA–Protein interactions for RNA: YKL073W

LHS1, Transcript of Molecular chaperone of the endoplasmic reticulum lumen, yeastyeast

Gene LHS1, Length 2,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LHS1YKL073W MTC1P47018 478 aaKnown RBP6.15□□□□□ -1.43
LHS1YKL073W FAP1P53971 965 aa5.75□□□□□ -1.49
LHS1YKL073W DRS1P32892 752 aaKnown RBP5.53□□□□□ -1.52
LHS1YKL073W PRY3P47033 881 aa5.4□□□□□ -1.55
LHS1YKL073W PRI1P10363 409 aa5.3□□□□□ -1.56
LHS1YKL073W AAD16Q02895 342 aa5.29□□□□□ -1.56
LHS1YKL073W ISW2Q08773 1120 aa5.16□□□□□ -1.58
LHS1YKL073W HAA1Q12753 694 aaKnown RBP5.09□□□□□ -1.59
LHS1YKL073W RPG1P38249 964 aaKnown RBP5.09□□□□□ -1.6
LHS1YKL073W YCK3P39962 524 aa5.08□□□□□ -1.6
LHS1YKL073W TSR3Q12094 313 aaKnown RBP4.97□□□□□ -1.61
LHS1YKL073W DIP2Q12220 943 aaPredicted RBP4.93□□□□□ -1.62
LHS1YKL073W RSE1Q04693 1361 aaKnown RBP4.83□□□□□ -1.64
LHS1YKL073W MRPL32P25348 183 aa4.81□□□□□ -1.64
LHS1YKL073W AVT3P36062 692 aa4.7□□□□□ -1.66
LHS1YKL073W REB1P21538 810 aa4.69□□□□□ -1.66
LHS1YKL073W YGL015CP33199 130 aa4.68□□□□□ -1.66
LHS1YKL073W RPL17AP05740 184 aaKnown RBP4.67□□□□□ -1.66
LHS1YKL073W RPL17BP46990 184 aaKnown RBP4.67□□□□□ -1.66
LHS1YKL073W BFR2Q06631 534 aaKnown RBP4.51□□□□□ -1.69
LHS1YKL073W CDC27P38042 758 aa4.5□□□□□ -1.69
LHS1YKL073W SPT21P35209 758 aa4.46□□□□□ -1.7
LHS1YKL073W YKR023WP36119 530 aaKnown RBP4.45□□□□□ -1.7
LHS1YKL073W UBP10P53874 792 aaPredicted RBP4.44□□□□□ -1.7
LHS1YKL073W MAP2P38174 421 aaKnown RBP4.4□□□□□ -1.71
LHS1YKL073W TFC8Q12308 588 aa4.37□□□□□ -1.71
LHS1YKL073W BUD31P25337 157 aaPredicted RBP4.37□□□□□ -1.71
LHS1YKL073W HOP09932 586 aa4.35□□□□□ -1.71
LHS1YKL073W DCD1P06773 312 aa4.32□□□□□ -1.72
LHS1YKL073W RIM101P33400 625 aa4.28□□□□□ -1.72
LHS1YKL073W TIF4632P39936 914 aaKnown RBP4.27□□□□□ -1.73
LHS1YKL073W SCY1P53009 804 aa4.27□□□□□ -1.73
LHS1YKL073W TGL3P40308 642 aa4.26□□□□□ -1.73
LHS1YKL073W SLX5P32828 619 aaKnown RBP4.25□□□□□ -1.73
LHS1YKL073W BCH2P36122 765 aa4.22□□□□□ -1.73
LHS1YKL073W UBP9P39967 754 aa4.19□□□□□ -1.74
LHS1YKL073W SIS1P25294 352 aaKnown RBP4.14□□□□□ -1.75
LHS1YKL073W OXP1P28273 1286 aa4.1□□□□□ -1.75
LHS1YKL073W EPS1P40557 701 aa4.1□□□□□ -1.75
LHS1YKL073W BDF1P35817 686 aa4.09□□□□□ -1.75
LHS1YKL073W YIL055CP40523 627 aaKnown RBP4.07□□□□□ -1.76
LHS1YKL073W PTP3P40048 928 aa4.06□□□□□ -1.76
LHS1YKL073W MST1P07236 462 aa4.06□□□□□ -1.76
LHS1YKL073W YOR238WQ08634 303 aa4.03□□□□□ -1.76
LHS1YKL073W NSR1P27476 414 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
LHS1YKL073W BBC1P47068 1157 aa4.02□□□□□ -1.77
LHS1YKL073W RSM7P47150 247 aa4.01□□□□□ -1.77
LHS1YKL073W AI2P03876 854 aa3.98□□□□□ -1.77
LHS1YKL073W YBL029C-AQ3E756 94 aa3.98□□□□□ -1.77
LHS1YKL073W YAP5P40574 245 aa3.97□□□□□ -1.77
LHS1YKL073W VNX1P42839 908 aa3.95□□□□□ -1.78
LHS1YKL073W TFA1P36100 482 aa3.95□□□□□ -1.78
LHS1YKL073W YAH1Q12184 172 aaKnown RBP3.94□□□□□ -1.78
LHS1YKL073W SPP1Q03012 353 aa3.91□□□□□ -1.78
LHS1YKL073W WSC3Q12215 556 aa3.89□□□□□ -1.79
LHS1YKL073W YLR271WQ06152 274 aa3.89□□□□□ -1.79
LHS1YKL073W GTT3P39996 337 aa3.88□□□□□ -1.79
LHS1YKL073W TIF11P38912 153 aaKnown RBP3.88□□□□□ -1.79
LHS1YKL073W PSD2P53037 1138 aaKnown RBP3.86□□□□□ -1.79
LHS1YKL073W AIR2Q12476 344 aaKnown RBP3.85□□□□□ -1.79
LHS1YKL073W YJL171CP46992 396 aa3.84□□□□□ -1.79
LHS1YKL073W FKH1P40466 484 aa3.84□□□□□ -1.8
LHS1YKL073W MRM1P25270 412 aa3.82□□□□□ -1.8
LHS1YKL073W ULI1P43604 169 aa3.81□□□□□ -1.8
LHS1YKL073W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
LHS1YKL073W IOC2Q12072 812 aa3.81□□□□□ -1.8
LHS1YKL073W LDB19Q12502 818 aa3.81□□□□□ -1.8
LHS1YKL073W SSP1P38871 571 aa3.8□□□□□ -1.8
LHS1YKL073W MSB4Q12317 492 aa3.8□□□□□ -1.8
LHS1YKL073W PIB1Q06651 286 aa3.8□□□□□ -1.8
LHS1YKL073W EAP1P36041 632 aaKnown RBP3.79□□□□□ -1.8
LHS1YKL073W BMT6Q12291 365 aa3.77□□□□□ -1.81
LHS1YKL073W YMR1P47147 688 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
LHS1YKL073W RTG3P38165 486 aa3.75□□□□□ -1.81
LHS1YKL073W VPS29P38759 282 aa3.74□□□□□ -1.81
LHS1YKL073W MGA2P40578 1113 aa3.74□□□□□ -1.81
LHS1YKL073W YOL036WQ08206 761 aa3.74□□□□□ -1.81
LHS1YKL073W DBP1P24784 617 aaKnown RBP3.74□□□□□ -1.81
LHS1YKL073W TRP5P00931 707 aaKnown RBP3.73□□□□□ -1.81
LHS1YKL073W RTG1P32607 177 aa3.73□□□□□ -1.81
LHS1YKL073W SET4P42948 560 aa3.73□□□□□ -1.81
LHS1YKL073W CST9Q06032 482 aa3.73□□□□□ -1.81
LHS1YKL073W NCR1Q12200 1170 aa3.72□□□□□ -1.81
LHS1YKL073W VMA1P17255 1071 aaKnown RBP3.72□□□□□ -1.81
LHS1YKL073W SAM3Q08986 587 aa3.72□□□□□ -1.81
LHS1YKL073W SEC61P32915 480 aa3.71□□□□□ -1.82
LHS1YKL073W YNL035CP53962 389 aaKnown RBP3.71□□□□□ -1.82
LHS1YKL073W YFR006WP43590 535 aa3.71□□□□□ -1.82
LHS1YKL073W STS1P38637 319 aa3.7□□□□□ -1.82
LHS1YKL073W ABP1P15891 592 aaKnown RBP3.68□□□□□ -1.82
LHS1YKL073W TFG1P41895 735 aaPredicted RBP3.67□□□□□ -1.82
LHS1YKL073W JIP4Q03361 876 aa3.66□□□□□ -1.82
LHS1YKL073W RCR1P38212 213 aa3.65□□□□□ -1.83
LHS1YKL073W GYP5Q12344 894 aa3.65□□□□□ -1.83
LHS1YKL073W DAN4P47179 1161 aa3.64□□□□□ -1.83
LHS1YKL073W HTA1P04911 132 aaKnown RBP3.63□□□□□ -1.83
LHS1YKL073W HTA2P04912 132 aa3.63□□□□□ -1.83
LHS1YKL073W SAP30P38429 201 aa3.62□□□□□ -1.83
LHS1YKL073W YDL129WQ07555 291 aa3.62□□□□□ -1.83
LHS1YKL073W PTC4P38089 393 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms