RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W MTC1P47018 478 aaKnown RBP17.67■□□□□ 0.42
SPC42YKL042W FAP1P53971 965 aa16.44■□□□□ 0.22
SPC42YKL042W DRS1P32892 752 aaKnown RBP16.04■□□□□ 0.16
SPC42YKL042W PRY3P47033 881 aa15.46■□□□□ 0.07
SPC42YKL042W PRI1P10363 409 aa15.16■□□□□ 0.02
SPC42YKL042W AAD16Q02895 342 aa15.14■□□□□ 0.01
SPC42YKL042W ISW2Q08773 1120 aa14.74□□□□□ -0.05
SPC42YKL042W RPG1P38249 964 aaKnown RBP14.63□□□□□ -0.07
SPC42YKL042W YCK3P39962 524 aa14.61□□□□□ -0.07
SPC42YKL042W HAA1Q12753 694 aaKnown RBP14.47□□□□□ -0.09
SPC42YKL042W TSR3Q12094 313 aaKnown RBP14.32□□□□□ -0.12
SPC42YKL042W DIP2Q12220 943 aaPredicted RBP14.25□□□□□ -0.13
SPC42YKL042W RSE1Q04693 1361 aaKnown RBP13.88□□□□□ -0.19
SPC42YKL042W MRPL32P25348 183 aa13.75□□□□□ -0.21
SPC42YKL042W AVT3P36062 692 aa13.59□□□□□ -0.23
SPC42YKL042W BFR2Q06631 534 aaKnown RBP13.56□□□□□ -0.24
SPC42YKL042W RPL17AP05740 184 aaKnown RBP13.49□□□□□ -0.25
SPC42YKL042W RPL17BP46990 184 aaKnown RBP13.49□□□□□ -0.25
SPC42YKL042W REB1P21538 810 aa13.46□□□□□ -0.25
SPC42YKL042W YGL015CP33199 130 aa13.33□□□□□ -0.28
SPC42YKL042W TFA1P36100 482 aa13.1□□□□□ -0.31
SPC42YKL042W CDC27P38042 758 aa12.99□□□□□ -0.33
SPC42YKL042W SPT21P35209 758 aa12.85□□□□□ -0.35
SPC42YKL042W YKR023WP36119 530 aaKnown RBP12.84□□□□□ -0.35
SPC42YKL042W UBP10P53874 792 aaPredicted RBP12.65□□□□□ -0.38
SPC42YKL042W MAP2P38174 421 aaKnown RBP12.64□□□□□ -0.39
SPC42YKL042W HOP09932 586 aa12.59□□□□□ -0.39
SPC42YKL042W TFC8Q12308 588 aa12.58□□□□□ -0.4
SPC42YKL042W DCD1P06773 312 aa12.55□□□□□ -0.4
SPC42YKL042W BUD31P25337 157 aaPredicted RBP12.39□□□□□ -0.43
SPC42YKL042W RIM101P33400 625 aa12.33□□□□□ -0.44
SPC42YKL042W SCY1P53009 804 aa12.29□□□□□ -0.44
SPC42YKL042W SLX5P32828 619 aaKnown RBP12.16□□□□□ -0.46
SPC42YKL042W BCH2P36122 765 aa12.16□□□□□ -0.46
SPC42YKL042W TIF4632P39936 914 aaKnown RBP12.15□□□□□ -0.46
SPC42YKL042W TGL3P40308 642 aa12.11□□□□□ -0.47
SPC42YKL042W OXP1P28273 1286 aa11.91□□□□□ -0.5
SPC42YKL042W UBP9P39967 754 aa11.87□□□□□ -0.51
SPC42YKL042W EPS1P40557 701 aa11.8□□□□□ -0.52
SPC42YKL042W BDF1P35817 686 aa11.78□□□□□ -0.52
SPC42YKL042W SIS1P25294 352 aaKnown RBP11.77□□□□□ -0.53
SPC42YKL042W YIL055CP40523 627 aaKnown RBP11.73□□□□□ -0.53
SPC42YKL042W PTP3P40048 928 aa11.72□□□□□ -0.53
SPC42YKL042W RQC2Q12532 1038 aaKnown RBP11.72□□□□□ -0.53
SPC42YKL042W MST1P07236 462 aa11.55□□□□□ -0.56
SPC42YKL042W RSM7P47150 247 aa11.55□□□□□ -0.56
SPC42YKL042W BBC1P47068 1157 aa11.51□□□□□ -0.57
SPC42YKL042W YOR238WQ08634 303 aa11.5□□□□□ -0.57
SPC42YKL042W YAH1Q12184 172 aaKnown RBP11.49□□□□□ -0.57
SPC42YKL042W AI2P03876 854 aa11.48□□□□□ -0.57
SPC42YKL042W YBL029C-AQ3E756 94 aa11.43□□□□□ -0.58
SPC42YKL042W NSR1P27476 414 aaKnown RBP RIP-Chip data11.41□□□□□ -0.58not detected
SPC42YKL042W YAP5P40574 245 aa11.34□□□□□ -0.59
SPC42YKL042W VNX1P42839 908 aa11.31□□□□□ -0.6
SPC42YKL042W YLR271WQ06152 274 aa11.28□□□□□ -0.6
SPC42YKL042W WSC3Q12215 556 aa11.2□□□□□ -0.62
SPC42YKL042W SPP1Q03012 353 aa11.19□□□□□ -0.62
SPC42YKL042W PSD2P53037 1138 aaKnown RBP11.14□□□□□ -0.63
SPC42YKL042W GTT3P39996 337 aa11.09□□□□□ -0.63
SPC42YKL042W TIF11P38912 153 aaKnown RBP11.06□□□□□ -0.64
SPC42YKL042W MRM1P25270 412 aa11.05□□□□□ -0.64
SPC42YKL042W PIB1Q06651 286 aa11.04□□□□□ -0.64
SPC42YKL042W SSP1P38871 571 aa11.02□□□□□ -0.65
SPC42YKL042W DMA1P38823 416 aa11.01□□□□□ -0.65
SPC42YKL042W AIR2Q12476 344 aaKnown RBP10.99□□□□□ -0.65
SPC42YKL042W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.97□□□□□ -0.65not detected
SPC42YKL042W FKH1P40466 484 aa10.94□□□□□ -0.66
SPC42YKL042W ULI1P43604 169 aa10.91□□□□□ -0.66
SPC42YKL042W YJL171CP46992 396 aa10.91□□□□□ -0.66
SPC42YKL042W IOC2Q12072 812 aa10.89□□□□□ -0.67
SPC42YKL042W LDB19Q12502 818 aa10.89□□□□□ -0.67
SPC42YKL042W CST9Q06032 482 aa10.86□□□□□ -0.67
SPC42YKL042W VPS29P38759 282 aa10.83□□□□□ -0.68
SPC42YKL042W YMR1P47147 688 aaKnown RBP RIP-Chip data10.81□□□□□ -0.68not detected
SPC42YKL042W MSB4Q12317 492 aa10.81□□□□□ -0.68
SPC42YKL042W DBP1P24784 617 aaKnown RBP10.79□□□□□ -0.68
SPC42YKL042W RTG3P38165 486 aa10.79□□□□□ -0.68
SPC42YKL042W MGA2P40578 1113 aa10.79□□□□□ -0.68
SPC42YKL042W EAP1P36041 632 aaKnown RBP10.76□□□□□ -0.69
SPC42YKL042W SET4P42948 560 aa10.76□□□□□ -0.69
SPC42YKL042W YFR006WP43590 535 aa10.75□□□□□ -0.69
SPC42YKL042W YOL036WQ08206 761 aa10.75□□□□□ -0.69
SPC42YKL042W BMT6Q12291 365 aa10.73□□□□□ -0.69
SPC42YKL042W TRP5P00931 707 aaKnown RBP10.7□□□□□ -0.7
SPC42YKL042W STS1P38637 319 aa10.7□□□□□ -0.7
SPC42YKL042W VMA1P17255 1071 aaKnown RBP10.68□□□□□ -0.7
SPC42YKL042W RTG1P32607 177 aa10.66□□□□□ -0.7
SPC42YKL042W RCR1P38212 213 aa10.64□□□□□ -0.71
SPC42YKL042W SAM3Q08986 587 aa10.63□□□□□ -0.71
SPC42YKL042W NCR1Q12200 1170 aa10.63□□□□□ -0.71
SPC42YKL042W YNL035CP53962 389 aaKnown RBP10.59□□□□□ -0.71
SPC42YKL042W SEC61P32915 480 aa10.56□□□□□ -0.72
SPC42YKL042W GYP5Q12344 894 aa10.48□□□□□ -0.73
SPC42YKL042W DAN4P47179 1161 aa10.45□□□□□ -0.74
SPC42YKL042W TFG1P41895 735 aaPredicted RBP10.44□□□□□ -0.74
SPC42YKL042W ABP1P15891 592 aaKnown RBP10.43□□□□□ -0.74
SPC42YKL042W JIP4Q03361 876 aa10.43□□□□□ -0.74
SPC42YKL042W DCW1P36091 449 aa10.4□□□□□ -0.74
SPC42YKL042W HTA1P04911 132 aaKnown RBP10.39□□□□□ -0.75
SPC42YKL042W HTA2P04912 132 aa10.39□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms