RNA–Protein interactions for RNA: YKL017C

HCS1, Transcript of Hexameric DNA polymerase alpha-associated DNA helicase A, yeastyeast

Gene HCS1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCS1YKL017C MTC1P47018 478 aaKnown RBP10.45□□□□□ -0.74
HCS1YKL017C FAP1P53971 965 aa9.87□□□□□ -0.83
HCS1YKL017C DRS1P32892 752 aaKnown RBP9.33□□□□□ -0.92
HCS1YKL017C PRY3P47033 881 aa9.28□□□□□ -0.92
HCS1YKL017C AAD16Q02895 342 aa9.06□□□□□ -0.96
HCS1YKL017C PRI1P10363 409 aa9.05□□□□□ -0.96
HCS1YKL017C YCK3P39962 524 aa8.76□□□□□ -1.01
HCS1YKL017C ISW2Q08773 1120 aa8.76□□□□□ -1.01
HCS1YKL017C HAA1Q12753 694 aaKnown RBP8.72□□□□□ -1.01
HCS1YKL017C RPG1P38249 964 aaKnown RBP8.68□□□□□ -1.02
HCS1YKL017C TSR3Q12094 313 aaKnown RBP8.52□□□□□ -1.05
HCS1YKL017C DIP2Q12220 943 aaPredicted RBP8.34□□□□□ -1.07
HCS1YKL017C MRPL32P25348 183 aa8.21□□□□□ -1.1
HCS1YKL017C RSE1Q04693 1361 aaKnown RBP8.19□□□□□ -1.1
HCS1YKL017C YGL015CP33199 130 aa8□□□□□ -1.13
HCS1YKL017C RPL17AP05740 184 aaKnown RBP7.95□□□□□ -1.14
HCS1YKL017C REB1P21538 810 aa7.95□□□□□ -1.14
HCS1YKL017C RPL17BP46990 184 aaKnown RBP7.95□□□□□ -1.14
HCS1YKL017C AVT3P36062 692 aa7.93□□□□□ -1.14
HCS1YKL017C CDC27P38042 758 aa7.71□□□□□ -1.18
HCS1YKL017C YKR023WP36119 530 aaKnown RBP7.59□□□□□ -1.19
HCS1YKL017C SPT21P35209 758 aa7.57□□□□□ -1.2
HCS1YKL017C UBP10P53874 792 aaPredicted RBP7.56□□□□□ -1.2
HCS1YKL017C BFR2Q06631 534 aaKnown RBP7.55□□□□□ -1.2
HCS1YKL017C MAP2P38174 421 aaKnown RBP7.51□□□□□ -1.21
HCS1YKL017C BUD31P25337 157 aaPredicted RBP7.5□□□□□ -1.21
HCS1YKL017C TFC8Q12308 588 aa7.44□□□□□ -1.22
HCS1YKL017C HOP09932 586 aa7.43□□□□□ -1.22
HCS1YKL017C DCD1P06773 312 aa7.4□□□□□ -1.23
HCS1YKL017C SCY1P53009 804 aa7.29□□□□□ -1.24
HCS1YKL017C TIF4632P39936 914 aaKnown RBP7.26□□□□□ -1.25
HCS1YKL017C RIM101P33400 625 aa7.24□□□□□ -1.25
HCS1YKL017C TGL3P40308 642 aa7.24□□□□□ -1.25
HCS1YKL017C SLX5P32828 619 aaKnown RBP7.23□□□□□ -1.25
HCS1YKL017C BCH2P36122 765 aa7.18□□□□□ -1.26
HCS1YKL017C UBP9P39967 754 aa7.15□□□□□ -1.27
HCS1YKL017C SIS1P25294 352 aaKnown RBP7.11□□□□□ -1.27
HCS1YKL017C OXP1P28273 1286 aa6.97□□□□□ -1.29
HCS1YKL017C EPS1P40557 701 aa6.96□□□□□ -1.29
HCS1YKL017C BDF1P35817 686 aa6.96□□□□□ -1.3
HCS1YKL017C MST1P07236 462 aa6.89□□□□□ -1.31
HCS1YKL017C YIL055CP40523 627 aaKnown RBP6.88□□□□□ -1.31
HCS1YKL017C PTP3P40048 928 aa6.86□□□□□ -1.31
HCS1YKL017C YOR238WQ08634 303 aa6.84□□□□□ -1.31
HCS1YKL017C YBL029C-AQ3E756 94 aa6.81□□□□□ -1.32
HCS1YKL017C NSR1P27476 414 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
HCS1YKL017C BBC1P47068 1157 aa6.78□□□□□ -1.32
HCS1YKL017C RSM7P47150 247 aa6.78□□□□□ -1.32
HCS1YKL017C VNX1P42839 908 aa6.75□□□□□ -1.33
HCS1YKL017C AI2P03876 854 aa6.74□□□□□ -1.33
HCS1YKL017C YAP5P40574 245 aa6.73□□□□□ -1.33
HCS1YKL017C YAH1Q12184 172 aaKnown RBP6.69□□□□□ -1.34
HCS1YKL017C SPP1Q03012 353 aa6.67□□□□□ -1.34
HCS1YKL017C WSC3Q12215 556 aa6.65□□□□□ -1.34
HCS1YKL017C TIF11P38912 153 aaKnown RBP6.6□□□□□ -1.35
HCS1YKL017C GTT3P39996 337 aa6.59□□□□□ -1.35
HCS1YKL017C YLR271WQ06152 274 aa6.57□□□□□ -1.36
HCS1YKL017C AIR2Q12476 344 aaKnown RBP6.57□□□□□ -1.36
HCS1YKL017C TFA1P36100 482 aa6.54□□□□□ -1.36
HCS1YKL017C FKH1P40466 484 aa6.54□□□□□ -1.36
HCS1YKL017C YJL171CP46992 396 aa6.54□□□□□ -1.36
HCS1YKL017C PSD2P53037 1138 aaKnown RBP6.53□□□□□ -1.36
HCS1YKL017C ULI1P43604 169 aa6.49□□□□□ -1.37
HCS1YKL017C PIB1Q06651 286 aa6.49□□□□□ -1.37
HCS1YKL017C LDB19Q12502 818 aa6.49□□□□□ -1.37
HCS1YKL017C IOC2Q12072 812 aa6.48□□□□□ -1.37
HCS1YKL017C MRM1P25270 412 aa6.47□□□□□ -1.37
HCS1YKL017C MSB4Q12317 492 aa6.43□□□□□ -1.38
HCS1YKL017C BMT6Q12291 365 aa6.42□□□□□ -1.38
HCS1YKL017C EAP1P36041 632 aaKnown RBP6.4□□□□□ -1.38
HCS1YKL017C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.4□□□□□ -1.39not detected
HCS1YKL017C SSP1P38871 571 aa6.39□□□□□ -1.39
HCS1YKL017C YMR1P47147 688 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
HCS1YKL017C YOL036WQ08206 761 aa6.36□□□□□ -1.39
HCS1YKL017C SET4P42948 560 aa6.35□□□□□ -1.39
HCS1YKL017C VPS29P38759 282 aa6.35□□□□□ -1.39
HCS1YKL017C TRP5P00931 707 aaKnown RBP6.34□□□□□ -1.39
HCS1YKL017C DBP1P24784 617 aaKnown RBP6.34□□□□□ -1.39
HCS1YKL017C RTG1P32607 177 aa6.34□□□□□ -1.39
HCS1YKL017C RTG3P38165 486 aa6.32□□□□□ -1.4
HCS1YKL017C NCR1Q12200 1170 aa6.32□□□□□ -1.4
HCS1YKL017C CST9Q06032 482 aa6.31□□□□□ -1.4
HCS1YKL017C YFR006WP43590 535 aa6.3□□□□□ -1.4
HCS1YKL017C YNL035CP53962 389 aaKnown RBP6.3□□□□□ -1.4
HCS1YKL017C VMA1P17255 1071 aaKnown RBP6.29□□□□□ -1.4
HCS1YKL017C MGA2P40578 1113 aa6.29□□□□□ -1.4
HCS1YKL017C SEC61P32915 480 aa6.29□□□□□ -1.4
HCS1YKL017C SAM3Q08986 587 aa6.29□□□□□ -1.4
HCS1YKL017C STS1P38637 319 aa6.28□□□□□ -1.4
HCS1YKL017C TFG1P41895 735 aaPredicted RBP6.21□□□□□ -1.41
HCS1YKL017C RCR1P38212 213 aa6.2□□□□□ -1.42
HCS1YKL017C JIP4Q03361 876 aa6.19□□□□□ -1.42
HCS1YKL017C DAN4P47179 1161 aa6.19□□□□□ -1.42
HCS1YKL017C ABP1P15891 592 aaKnown RBP6.18□□□□□ -1.42
HCS1YKL017C GYP5Q12344 894 aa6.18□□□□□ -1.42
HCS1YKL017C SAP30P38429 201 aa6.16□□□□□ -1.42
HCS1YKL017C HTA1P04911 132 aaKnown RBP6.14□□□□□ -1.43
HCS1YKL017C HTA2P04912 132 aa6.14□□□□□ -1.43
HCS1YKL017C YDL129WQ07555 291 aa6.14□□□□□ -1.43
HCS1YKL017C DCW1P36091 449 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms