RNA–Protein interactions for RNA: YJR108W

ABM1, Transcript of Protein of unknown function, yeastyeast

Gene ABM1, Length 372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABM1YJR108W MTC1P47018 478 aaKnown RBP12.82□□□□□ -0.36
ABM1YJR108W FAP1P53971 965 aa11.93□□□□□ -0.5
ABM1YJR108W DRS1P32892 752 aaKnown RBP11.61□□□□□ -0.55
ABM1YJR108W PRY3P47033 881 aa11.21□□□□□ -0.61
ABM1YJR108W PRI1P10363 409 aa11□□□□□ -0.65
ABM1YJR108W AAD16Q02895 342 aa10.98□□□□□ -0.65
ABM1YJR108W ISW2Q08773 1120 aa10.71□□□□□ -0.69
ABM1YJR108W RPG1P38249 964 aaKnown RBP10.59□□□□□ -0.71
ABM1YJR108W YCK3P39962 524 aa10.56□□□□□ -0.72
ABM1YJR108W HAA1Q12753 694 aaKnown RBP10.52□□□□□ -0.73
ABM1YJR108W TSR3Q12094 313 aaKnown RBP10.37□□□□□ -0.75
ABM1YJR108W DIP2Q12220 943 aaPredicted RBP10.31□□□□□ -0.76
ABM1YJR108W RSE1Q04693 1361 aaKnown RBP10.07□□□□□ -0.8
ABM1YJR108W MRPL32P25348 183 aa9.98□□□□□ -0.81
ABM1YJR108W AVT3P36062 692 aa9.83□□□□□ -0.84
ABM1YJR108W RPL17AP05740 184 aaKnown RBP9.77□□□□□ -0.85
ABM1YJR108W REB1P21538 810 aa9.77□□□□□ -0.85
ABM1YJR108W RPL17BP46990 184 aaKnown RBP9.77□□□□□ -0.85
ABM1YJR108W YGL015CP33199 130 aa9.66□□□□□ -0.86
ABM1YJR108W BFR2Q06631 534 aaKnown RBP9.49□□□□□ -0.89
ABM1YJR108W CDC27P38042 758 aa9.4□□□□□ -0.9
ABM1YJR108W SPT21P35209 758 aa9.32□□□□□ -0.92
ABM1YJR108W YKR023WP36119 530 aaKnown RBP9.29□□□□□ -0.92
ABM1YJR108W UBP10P53874 792 aaPredicted RBP9.2□□□□□ -0.94
ABM1YJR108W MAP2P38174 421 aaKnown RBP9.16□□□□□ -0.94
ABM1YJR108W TFC8Q12308 588 aa9.11□□□□□ -0.95
ABM1YJR108W HOP09932 586 aa9.1□□□□□ -0.95
ABM1YJR108W DCD1P06773 312 aa9.06□□□□□ -0.96
ABM1YJR108W BUD31P25337 157 aaPredicted RBP9.01□□□□□ -0.97
ABM1YJR108W RIM101P33400 625 aa8.93□□□□□ -0.98
ABM1YJR108W SCY1P53009 804 aa8.91□□□□□ -0.98
ABM1YJR108W SLX5P32828 619 aaKnown RBP8.83□□□□□ -1
ABM1YJR108W TIF4632P39936 914 aaKnown RBP8.83□□□□□ -1
ABM1YJR108W TGL3P40308 642 aa8.8□□□□□ -1
ABM1YJR108W BCH2P36122 765 aa8.79□□□□□ -1
ABM1YJR108W UBP9P39967 754 aa8.64□□□□□ -1.03
ABM1YJR108W OXP1P28273 1286 aa8.6□□□□□ -1.03
ABM1YJR108W EPS1P40557 701 aa8.56□□□□□ -1.04
ABM1YJR108W SIS1P25294 352 aaKnown RBP8.55□□□□□ -1.04
ABM1YJR108W BDF1P35817 686 aa8.53□□□□□ -1.04
ABM1YJR108W PTP3P40048 928 aa8.5□□□□□ -1.05
ABM1YJR108W YIL055CP40523 627 aaKnown RBP8.49□□□□□ -1.05
ABM1YJR108W MST1P07236 462 aa8.38□□□□□ -1.07
ABM1YJR108W BBC1P47068 1157 aa8.36□□□□□ -1.07
ABM1YJR108W RSM7P47150 247 aa8.36□□□□□ -1.07
ABM1YJR108W YOR238WQ08634 303 aa8.34□□□□□ -1.07
ABM1YJR108W AI2P03876 854 aa8.32□□□□□ -1.08
ABM1YJR108W NSR1P27476 414 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
ABM1YJR108W YAH1Q12184 172 aaKnown RBP8.31□□□□□ -1.08
ABM1YJR108W YBL029C-AQ3E756 94 aa8.29□□□□□ -1.08
ABM1YJR108W YAP5P40574 245 aa8.24□□□□□ -1.09
ABM1YJR108W TFA1P36100 482 aa8.21□□□□□ -1.1
ABM1YJR108W VNX1P42839 908 aa8.2□□□□□ -1.1
ABM1YJR108W YLR271WQ06152 274 aa8.15□□□□□ -1.1
ABM1YJR108W SPP1Q03012 353 aa8.13□□□□□ -1.11
ABM1YJR108W WSC3Q12215 556 aa8.12□□□□□ -1.11
ABM1YJR108W PSD2P53037 1138 aaKnown RBP8.08□□□□□ -1.12
ABM1YJR108W GTT3P39996 337 aa8.07□□□□□ -1.12
ABM1YJR108W TIF11P38912 153 aaKnown RBP8.04□□□□□ -1.12
ABM1YJR108W MRM1P25270 412 aa8□□□□□ -1.13
ABM1YJR108W PIB1Q06651 286 aa7.98□□□□□ -1.13
ABM1YJR108W SSP1P38871 571 aa7.97□□□□□ -1.13
ABM1YJR108W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
ABM1YJR108W AIR2Q12476 344 aaKnown RBP7.97□□□□□ -1.13
ABM1YJR108W FKH1P40466 484 aa7.96□□□□□ -1.14
ABM1YJR108W YJL171CP46992 396 aa7.93□□□□□ -1.14
ABM1YJR108W ULI1P43604 169 aa7.91□□□□□ -1.14
ABM1YJR108W LDB19Q12502 818 aa7.91□□□□□ -1.14
ABM1YJR108W IOC2Q12072 812 aa7.89□□□□□ -1.15
ABM1YJR108W MSB4Q12317 492 aa7.87□□□□□ -1.15
ABM1YJR108W YMR1P47147 688 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15not detected
ABM1YJR108W CST9Q06032 482 aa7.84□□□□□ -1.15
ABM1YJR108W EAP1P36041 632 aaKnown RBP7.83□□□□□ -1.16
ABM1YJR108W VPS29P38759 282 aa7.82□□□□□ -1.16
ABM1YJR108W RTG3P38165 486 aa7.81□□□□□ -1.16
ABM1YJR108W MGA2P40578 1113 aa7.81□□□□□ -1.16
ABM1YJR108W YOL036WQ08206 761 aa7.81□□□□□ -1.16
ABM1YJR108W DBP1P24784 617 aaKnown RBP7.8□□□□□ -1.16
ABM1YJR108W BMT6Q12291 365 aa7.8□□□□□ -1.16
ABM1YJR108W SET4P42948 560 aa7.79□□□□□ -1.16
ABM1YJR108W YFR006WP43590 535 aa7.78□□□□□ -1.16
ABM1YJR108W TRP5P00931 707 aaKnown RBP7.75□□□□□ -1.17
ABM1YJR108W VMA1P17255 1071 aaKnown RBP7.75□□□□□ -1.17
ABM1YJR108W RTG1P32607 177 aa7.74□□□□□ -1.17
ABM1YJR108W STS1P38637 319 aa7.74□□□□□ -1.17
ABM1YJR108W SAM3Q08986 587 aa7.71□□□□□ -1.18
ABM1YJR108W NCR1Q12200 1170 aa7.7□□□□□ -1.18
ABM1YJR108W YNL035CP53962 389 aaKnown RBP7.69□□□□□ -1.18
ABM1YJR108W RCR1P38212 213 aa7.68□□□□□ -1.18
ABM1YJR108W SEC61P32915 480 aa7.67□□□□□ -1.18
ABM1YJR108W ABP1P15891 592 aaKnown RBP7.6□□□□□ -1.19
ABM1YJR108W GYP5Q12344 894 aa7.6□□□□□ -1.19
ABM1YJR108W TFG1P41895 735 aaPredicted RBP7.59□□□□□ -1.19
ABM1YJR108W JIP4Q03361 876 aa7.58□□□□□ -1.2
ABM1YJR108W DAN4P47179 1161 aa7.57□□□□□ -1.2
ABM1YJR108W HTA1P04911 132 aaKnown RBP7.55□□□□□ -1.2
ABM1YJR108W HTA2P04912 132 aa7.55□□□□□ -1.2
ABM1YJR108W DCW1P36091 449 aa7.53□□□□□ -1.2
ABM1YJR108W SAP30P38429 201 aa7.52□□□□□ -1.21
ABM1YJR108W YDL129WQ07555 291 aa7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms