RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W MTC1P47018 478 aaKnown RBP12.64□□□□□ -0.39
HIT1YJR055W DRS1P32892 752 aaKnown RBP11.68□□□□□ -0.54
HIT1YJR055W FAP1P53971 965 aa11.62□□□□□ -0.55
HIT1YJR055W PRY3P47033 881 aa10.97□□□□□ -0.65
HIT1YJR055W PRI1P10363 409 aa10.72□□□□□ -0.69
HIT1YJR055W AAD16Q02895 342 aa10.66□□□□□ -0.7
HIT1YJR055W ISW2Q08773 1120 aa10.48□□□□□ -0.73
HIT1YJR055W RPG1P38249 964 aaKnown RBP10.39□□□□□ -0.75
HIT1YJR055W YCK3P39962 524 aa10.3□□□□□ -0.76
HIT1YJR055W DIP2Q12220 943 aaPredicted RBP10.29□□□□□ -0.76
HIT1YJR055W HAA1Q12753 694 aaKnown RBP10.2□□□□□ -0.78
HIT1YJR055W TSR3Q12094 313 aaKnown RBP10.13□□□□□ -0.79
HIT1YJR055W RSE1Q04693 1361 aaKnown RBP9.98□□□□□ -0.81
HIT1YJR055W AVT3P36062 692 aa9.9□□□□□ -0.82
HIT1YJR055W MRPL32P25348 183 aa9.72□□□□□ -0.85
HIT1YJR055W RPL17AP05740 184 aaKnown RBP9.67□□□□□ -0.86
HIT1YJR055W RPL17BP46990 184 aaKnown RBP9.67□□□□□ -0.86
HIT1YJR055W BFR2Q06631 534 aaKnown RBP9.66□□□□□ -0.86
HIT1YJR055W REB1P21538 810 aa9.62□□□□□ -0.87
HIT1YJR055W YGL015CP33199 130 aa9.35□□□□□ -0.91
HIT1YJR055W SPT21P35209 758 aa9.26□□□□□ -0.93
HIT1YJR055W CDC27P38042 758 aa9.24□□□□□ -0.93
HIT1YJR055W YKR023WP36119 530 aaKnown RBP9.18□□□□□ -0.94
HIT1YJR055W BUD31P25337 157 aaPredicted RBP9.02□□□□□ -0.97
HIT1YJR055W TFC8Q12308 588 aa8.99□□□□□ -0.97
HIT1YJR055W HOP09932 586 aa8.98□□□□□ -0.97
HIT1YJR055W UBP10P53874 792 aaPredicted RBP8.97□□□□□ -0.97
HIT1YJR055W DCD1P06773 312 aa8.95□□□□□ -0.98
HIT1YJR055W MAP2P38174 421 aaKnown RBP8.95□□□□□ -0.98
HIT1YJR055W RIM101P33400 625 aa8.91□□□□□ -0.98
HIT1YJR055W SCY1P53009 804 aa8.75□□□□□ -1.01
HIT1YJR055W BCH2P36122 765 aa8.69□□□□□ -1.02
HIT1YJR055W SLX5P32828 619 aaKnown RBP8.64□□□□□ -1.03
HIT1YJR055W OXP1P28273 1286 aa8.61□□□□□ -1.03
HIT1YJR055W TIF4632P39936 914 aaKnown RBP8.59□□□□□ -1.03
HIT1YJR055W TGL3P40308 642 aa8.57□□□□□ -1.04
HIT1YJR055W SIS1P25294 352 aaKnown RBP8.48□□□□□ -1.05
HIT1YJR055W PTP3P40048 928 aa8.46□□□□□ -1.06
HIT1YJR055W YIL055CP40523 627 aaKnown RBP8.46□□□□□ -1.06
HIT1YJR055W EPS1P40557 701 aa8.46□□□□□ -1.06
HIT1YJR055W BDF1P35817 686 aa8.43□□□□□ -1.06
HIT1YJR055W TFA1P36100 482 aa8.41□□□□□ -1.06
HIT1YJR055W RSM7P47150 247 aa8.35□□□□□ -1.07
HIT1YJR055W UBP9P39967 754 aa8.33□□□□□ -1.08
HIT1YJR055W YAH1Q12184 172 aaKnown RBP8.32□□□□□ -1.08
HIT1YJR055W AI2P03876 854 aa8.28□□□□□ -1.08
HIT1YJR055W BBC1P47068 1157 aa8.28□□□□□ -1.08
HIT1YJR055W MST1P07236 462 aa8.21□□□□□ -1.1
HIT1YJR055W YLR271WQ06152 274 aa8.2□□□□□ -1.1
HIT1YJR055W NSR1P27476 414 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
HIT1YJR055W YOR238WQ08634 303 aa8.17□□□□□ -1.1
HIT1YJR055W YAP5P40574 245 aa8.1□□□□□ -1.11
HIT1YJR055W PSD2P53037 1138 aaKnown RBP8.09□□□□□ -1.11
HIT1YJR055W YBL029C-AQ3E756 94 aa8.08□□□□□ -1.12
HIT1YJR055W SSP1P38871 571 aa8.06□□□□□ -1.12
HIT1YJR055W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
HIT1YJR055W VNX1P42839 908 aa8□□□□□ -1.13
HIT1YJR055W MRM1P25270 412 aa7.97□□□□□ -1.13
HIT1YJR055W WSC3Q12215 556 aa7.94□□□□□ -1.14
HIT1YJR055W SPP1Q03012 353 aa7.92□□□□□ -1.14
HIT1YJR055W GTT3P39996 337 aa7.91□□□□□ -1.14
HIT1YJR055W CST9Q06032 482 aa7.9□□□□□ -1.14
HIT1YJR055W PIB1Q06651 286 aa7.89□□□□□ -1.15
HIT1YJR055W MGA2P40578 1113 aa7.88□□□□□ -1.15
HIT1YJR055W TIF11P38912 153 aaKnown RBP7.85□□□□□ -1.15
HIT1YJR055W VPS29P38759 282 aa7.82□□□□□ -1.16
HIT1YJR055W RTG3P38165 486 aa7.8□□□□□ -1.16
HIT1YJR055W YMR1P47147 688 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
HIT1YJR055W DBP1P24784 617 aaKnown RBP7.76□□□□□ -1.17
HIT1YJR055W FKH1P40466 484 aa7.76□□□□□ -1.17
HIT1YJR055W AIR2Q12476 344 aaKnown RBP7.76□□□□□ -1.17
HIT1YJR055W ULI1P43604 169 aa7.75□□□□□ -1.17
HIT1YJR055W YFR006WP43590 535 aa7.74□□□□□ -1.17
HIT1YJR055W IOC2Q12072 812 aa7.74□□□□□ -1.17
HIT1YJR055W STS1P38637 319 aa7.73□□□□□ -1.17
HIT1YJR055W MSB4Q12317 492 aa7.73□□□□□ -1.17
HIT1YJR055W LDB19Q12502 818 aa7.73□□□□□ -1.17
HIT1YJR055W RCR1P38212 213 aa7.72□□□□□ -1.17
HIT1YJR055W YOL036WQ08206 761 aa7.71□□□□□ -1.18
HIT1YJR055W VMA1P17255 1071 aaKnown RBP7.69□□□□□ -1.18
HIT1YJR055W SET4P42948 560 aa7.68□□□□□ -1.18
HIT1YJR055W EAP1P36041 632 aaKnown RBP7.67□□□□□ -1.18
HIT1YJR055W YJL171CP46992 396 aa7.66□□□□□ -1.18
HIT1YJR055W SAM3Q08986 587 aa7.66□□□□□ -1.18
HIT1YJR055W TRP5P00931 707 aaKnown RBP7.63□□□□□ -1.19
HIT1YJR055W RTG1P32607 177 aa7.59□□□□□ -1.19
HIT1YJR055W BMT6Q12291 365 aa7.57□□□□□ -1.2
HIT1YJR055W YNL035CP53962 389 aaKnown RBP7.55□□□□□ -1.2
HIT1YJR055W NCR1Q12200 1170 aa7.54□□□□□ -1.2
HIT1YJR055W SEC61P32915 480 aa7.53□□□□□ -1.2
HIT1YJR055W GYP5Q12344 894 aa7.53□□□□□ -1.2
HIT1YJR055W ABP1P15891 592 aaKnown RBP7.51□□□□□ -1.21
HIT1YJR055W RAM2P29703 316 aa7.48□□□□□ -1.21
HIT1YJR055W DAN4P47179 1161 aa7.48□□□□□ -1.21
HIT1YJR055W DCW1P36091 449 aa7.47□□□□□ -1.21
HIT1YJR055W HTA1P04911 132 aaKnown RBP7.46□□□□□ -1.22
HIT1YJR055W HTA2P04912 132 aa7.46□□□□□ -1.22
HIT1YJR055W JIP4Q03361 876 aa7.46□□□□□ -1.22
HIT1YJR055W MAK11P20484 414 aaKnown RBP7.45□□□□□ -1.22
HIT1YJR055W TFG1P41895 735 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms