RNA–Protein interactions for RNA: YJR048W

CYC1, Transcript of Cytochrome c, isoform 1, yeastyeast

Gene CYC1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CYC1YJR048W MTC1P47018 478 aaKnown RBP14.24□□□□□ -0.13
CYC1YJR048W DRS1P32892 752 aaKnown RBP13.27□□□□□ -0.29
CYC1YJR048W FAP1P53971 965 aa12.91□□□□□ -0.34
CYC1YJR048W PRY3P47033 881 aa12.14□□□□□ -0.47
CYC1YJR048W PRI1P10363 409 aa12.05□□□□□ -0.48
CYC1YJR048W AAD16Q02895 342 aa11.99□□□□□ -0.49
CYC1YJR048W ISW2Q08773 1120 aa11.82□□□□□ -0.52
CYC1YJR048W RPG1P38249 964 aaKnown RBP11.73□□□□□ -0.53
CYC1YJR048W DIP2Q12220 943 aaPredicted RBP11.67□□□□□ -0.54
CYC1YJR048W YCK3P39962 524 aa11.46□□□□□ -0.57
CYC1YJR048W TSR3Q12094 313 aaKnown RBP11.42□□□□□ -0.58
CYC1YJR048W HAA1Q12753 694 aaKnown RBP11.36□□□□□ -0.59
CYC1YJR048W RSE1Q04693 1361 aaKnown RBP11.28□□□□□ -0.6
CYC1YJR048W AVT3P36062 692 aa11.2□□□□□ -0.62
CYC1YJR048W BFR2Q06631 534 aaKnown RBP10.99□□□□□ -0.65
CYC1YJR048W MRPL32P25348 183 aa10.95□□□□□ -0.66
CYC1YJR048W RPL17AP05740 184 aaKnown RBP10.94□□□□□ -0.66
CYC1YJR048W RPL17BP46990 184 aaKnown RBP10.94□□□□□ -0.66
CYC1YJR048W REB1P21538 810 aa10.88□□□□□ -0.67
CYC1YJR048W YGL015CP33199 130 aa10.51□□□□□ -0.73
CYC1YJR048W SPT21P35209 758 aa10.42□□□□□ -0.74
CYC1YJR048W CDC27P38042 758 aa10.4□□□□□ -0.74
CYC1YJR048W YKR023WP36119 530 aaKnown RBP10.37□□□□□ -0.75
CYC1YJR048W HOP09932 586 aa10.17□□□□□ -0.78
CYC1YJR048W TFC8Q12308 588 aa10.14□□□□□ -0.79
CYC1YJR048W DCD1P06773 312 aa10.12□□□□□ -0.79
CYC1YJR048W RIM101P33400 625 aa10.08□□□□□ -0.8
CYC1YJR048W MAP2P38174 421 aaKnown RBP10.08□□□□□ -0.8
CYC1YJR048W UBP10P53874 792 aaPredicted RBP10.05□□□□□ -0.8
CYC1YJR048W SCY1P53009 804 aa9.87□□□□□ -0.83
CYC1YJR048W BCH2P36122 765 aa9.82□□□□□ -0.84
CYC1YJR048W OXP1P28273 1286 aa9.76□□□□□ -0.85
CYC1YJR048W SLX5P32828 619 aaKnown RBP9.72□□□□□ -0.85
CYC1YJR048W TIF4632P39936 914 aaKnown RBP9.67□□□□□ -0.86
CYC1YJR048W TGL3P40308 642 aa9.64□□□□□ -0.87
CYC1YJR048W BUD31P25337 157 aaPredicted RBP9.63□□□□□ -0.87
CYC1YJR048W TFA1P36100 482 aa9.62□□□□□ -0.87
CYC1YJR048W YIL055CP40523 627 aaKnown RBP9.61□□□□□ -0.87
CYC1YJR048W PTP3P40048 928 aa9.59□□□□□ -0.87
CYC1YJR048W EPS1P40557 701 aa9.56□□□□□ -0.88
CYC1YJR048W BDF1P35817 686 aa9.53□□□□□ -0.88
CYC1YJR048W YAH1Q12184 172 aaKnown RBP9.47□□□□□ -0.89
CYC1YJR048W RSM7P47150 247 aa9.46□□□□□ -0.9
CYC1YJR048W AI2P03876 854 aa9.38□□□□□ -0.91
CYC1YJR048W BBC1P47068 1157 aa9.37□□□□□ -0.91
CYC1YJR048W UBP9P39967 754 aa9.35□□□□□ -0.91
CYC1YJR048W YLR271WQ06152 274 aa9.3□□□□□ -0.92
CYC1YJR048W MST1P07236 462 aa9.22□□□□□ -0.93
CYC1YJR048W YOR238WQ08634 303 aa9.21□□□□□ -0.94
CYC1YJR048W SIS1P25294 352 aaKnown RBP9.2□□□□□ -0.94
CYC1YJR048W SSP1P38871 571 aa9.15□□□□□ -0.94
CYC1YJR048W NSR1P27476 414 aaKnown RBP RIP-Chip data9.14□□□□□ -0.95not detected
CYC1YJR048W PSD2P53037 1138 aaKnown RBP9.14□□□□□ -0.95
CYC1YJR048W YAP5P40574 245 aa9.12□□□□□ -0.95
CYC1YJR048W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.09□□□□□ -0.95not detected
CYC1YJR048W YBL029C-AQ3E756 94 aa9.09□□□□□ -0.95
CYC1YJR048W MRM1P25270 412 aa9.04□□□□□ -0.96
CYC1YJR048W VNX1P42839 908 aa9□□□□□ -0.97
CYC1YJR048W WSC3Q12215 556 aa8.98□□□□□ -0.97
CYC1YJR048W CST9Q06032 482 aa8.97□□□□□ -0.97
CYC1YJR048W PIB1Q06651 286 aa8.95□□□□□ -0.98
CYC1YJR048W MGA2P40578 1113 aa8.93□□□□□ -0.98
CYC1YJR048W GTT3P39996 337 aa8.92□□□□□ -0.98
CYC1YJR048W SPP1Q03012 353 aa8.92□□□□□ -0.98
CYC1YJR048W RTG3P38165 486 aa8.84□□□□□ -0.99
CYC1YJR048W VPS29P38759 282 aa8.84□□□□□ -0.99
CYC1YJR048W TIF11P38912 153 aaKnown RBP8.82□□□□□ -1
CYC1YJR048W YMR1P47147 688 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
CYC1YJR048W DBP1P24784 617 aaKnown RBP8.8□□□□□ -1
CYC1YJR048W YFR006WP43590 535 aa8.78□□□□□ -1
CYC1YJR048W RCR1P38212 213 aa8.77□□□□□ -1.01
CYC1YJR048W ULI1P43604 169 aa8.75□□□□□ -1.01
CYC1YJR048W STS1P38637 319 aa8.74□□□□□ -1.01
CYC1YJR048W IOC2Q12072 812 aa8.71□□□□□ -1.02
CYC1YJR048W AIR2Q12476 344 aaKnown RBP8.7□□□□□ -1.02
CYC1YJR048W LDB19Q12502 818 aa8.69□□□□□ -1.02
CYC1YJR048W SET4P42948 560 aa8.68□□□□□ -1.02
CYC1YJR048W MSB4Q12317 492 aa8.68□□□□□ -1.02
CYC1YJR048W VMA1P17255 1071 aaKnown RBP8.67□□□□□ -1.02
CYC1YJR048W FKH1P40466 484 aa8.67□□□□□ -1.02
CYC1YJR048W YOL036WQ08206 761 aa8.67□□□□□ -1.02
CYC1YJR048W EAP1P36041 632 aaKnown RBP8.64□□□□□ -1.03
CYC1YJR048W YJL171CP46992 396 aa8.64□□□□□ -1.03
CYC1YJR048W SAM3Q08986 587 aa8.61□□□□□ -1.03
CYC1YJR048W TRP5P00931 707 aaKnown RBP8.6□□□□□ -1.03
CYC1YJR048W RTG1P32607 177 aa8.55□□□□□ -1.04
CYC1YJR048W RQC2Q12532 1038 aaKnown RBP8.54□□□□□ -1.04
CYC1YJR048W NCR1Q12200 1170 aa8.52□□□□□ -1.05
CYC1YJR048W BMT6Q12291 365 aa8.52□□□□□ -1.05
CYC1YJR048W GYP5Q12344 894 aa8.52□□□□□ -1.05
CYC1YJR048W YNL035CP53962 389 aaKnown RBP8.5□□□□□ -1.05
CYC1YJR048W RAM2P29703 316 aa8.49□□□□□ -1.05
CYC1YJR048W SEC61P32915 480 aa8.46□□□□□ -1.06
CYC1YJR048W DCW1P36091 449 aa8.46□□□□□ -1.06
CYC1YJR048W ABP1P15891 592 aaKnown RBP8.43□□□□□ -1.06
CYC1YJR048W MAK11P20484 414 aaKnown RBP8.43□□□□□ -1.06
CYC1YJR048W MIF2P35201 549 aa8.43□□□□□ -1.06
CYC1YJR048W HTA1P04911 132 aaKnown RBP8.42□□□□□ -1.06
CYC1YJR048W HTA2P04912 132 aa8.42□□□□□ -1.06
CYC1YJR048W DAN4P47179 1161 aa8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms