RNA–Protein interactions for RNA: YJR005C-A

LSO1, Transcript of Putative protein of unknown function, yeastyeast

Gene LSO1, Length 282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSO1YJR005C-A MTC1P47018 478 aaKnown RBP11.41□□□□□ -0.58
LSO1YJR005C-A FAP1P53971 965 aa10.74□□□□□ -0.69
LSO1YJR005C-A DRS1P32892 752 aaKnown RBP10.31□□□□□ -0.76
LSO1YJR005C-A PRY3P47033 881 aa10.1□□□□□ -0.79
LSO1YJR005C-A PRI1P10363 409 aa9.83□□□□□ -0.84
LSO1YJR005C-A AAD16Q02895 342 aa9.82□□□□□ -0.84
LSO1YJR005C-A ISW2Q08773 1120 aa9.57□□□□□ -0.88
LSO1YJR005C-A RPG1P38249 964 aaKnown RBP9.46□□□□□ -0.9
LSO1YJR005C-A YCK3P39962 524 aa9.45□□□□□ -0.9
LSO1YJR005C-A HAA1Q12753 694 aaKnown RBP9.44□□□□□ -0.9
LSO1YJR005C-A TSR3Q12094 313 aaKnown RBP9.28□□□□□ -0.92
LSO1YJR005C-A DIP2Q12220 943 aaPredicted RBP9.16□□□□□ -0.94
LSO1YJR005C-A RSE1Q04693 1361 aaKnown RBP8.97□□□□□ -0.97
LSO1YJR005C-A MRPL32P25348 183 aa8.93□□□□□ -0.98
LSO1YJR005C-A REB1P21538 810 aa8.73□□□□□ -1.01
LSO1YJR005C-A RPL17AP05740 184 aaKnown RBP8.71□□□□□ -1.02
LSO1YJR005C-A RPL17BP46990 184 aaKnown RBP8.71□□□□□ -1.02
LSO1YJR005C-A AVT3P36062 692 aa8.7□□□□□ -1.02
LSO1YJR005C-A YGL015CP33199 130 aa8.65□□□□□ -1.02
LSO1YJR005C-A BFR2Q06631 534 aaKnown RBP8.4□□□□□ -1.06
LSO1YJR005C-A CDC27P38042 758 aa8.39□□□□□ -1.07
LSO1YJR005C-A SPT21P35209 758 aa8.28□□□□□ -1.08
LSO1YJR005C-A YKR023WP36119 530 aaKnown RBP8.27□□□□□ -1.09
LSO1YJR005C-A UBP10P53874 792 aaPredicted RBP8.22□□□□□ -1.09
LSO1YJR005C-A MAP2P38174 421 aaKnown RBP8.18□□□□□ -1.1
LSO1YJR005C-A HOP09932 586 aa8.13□□□□□ -1.11
LSO1YJR005C-A TFC8Q12308 588 aa8.11□□□□□ -1.11
LSO1YJR005C-A DCD1P06773 312 aa8.1□□□□□ -1.11
LSO1YJR005C-A BUD31P25337 157 aaPredicted RBP8.09□□□□□ -1.11
LSO1YJR005C-A SCY1P53009 804 aa7.97□□□□□ -1.13
LSO1YJR005C-A TIF4632P39936 914 aaKnown RBP7.91□□□□□ -1.14
LSO1YJR005C-A RIM101P33400 625 aa7.9□□□□□ -1.14
LSO1YJR005C-A SGS1P35187 1447 aa7.89□□□□□ -1.15
LSO1YJR005C-A SLX5P32828 619 aaKnown RBP7.89□□□□□ -1.15
LSO1YJR005C-A MON2P48563 1636 aaPredicted RBP7.85□□□□□ -1.15
LSO1YJR005C-A TGL3P40308 642 aa7.84□□□□□ -1.15
LSO1YJR005C-A BCH2P36122 765 aa7.83□□□□□ -1.16
LSO1YJR005C-A INO80P53115 1489 aa7.81□□□□□ -1.16
LSO1YJR005C-A UBP9P39967 754 aa7.75□□□□□ -1.17
LSO1YJR005C-A TCB3Q03640 1545 aaKnown RBP7.72□□□□□ -1.17
LSO1YJR005C-A SIS1P25294 352 aaKnown RBP7.7□□□□□ -1.18
LSO1YJR005C-A TY1B-DR4Q07793 1604 aa7.63□□□□□ -1.19
LSO1YJR005C-A EPS1P40557 701 aa7.62□□□□□ -1.19
LSO1YJR005C-A OXP1P28273 1286 aa7.61□□□□□ -1.19
LSO1YJR005C-A SPA2P23201 1466 aaKnown RBP7.6□□□□□ -1.19
LSO1YJR005C-A BDF1P35817 686 aa7.59□□□□□ -1.19
LSO1YJR005C-A PTP3P40048 928 aa7.58□□□□□ -1.2
LSO1YJR005C-A YIL055CP40523 627 aaKnown RBP7.55□□□□□ -1.2
LSO1YJR005C-A SSN2P38931 1420 aa7.54□□□□□ -1.2
LSO1YJR005C-A HSL1P34244 1518 aa7.5□□□□□ -1.21
LSO1YJR005C-A SPT6P23615 1451 aaKnown RBP7.48□□□□□ -1.21
LSO1YJR005C-A SWR1Q05471 1514 aa7.47□□□□□ -1.21
LSO1YJR005C-A MST1P07236 462 aa7.45□□□□□ -1.22
LSO1YJR005C-A BBC1P47068 1157 aa7.45□□□□□ -1.22
LSO1YJR005C-A YOR238WQ08634 303 aa7.45□□□□□ -1.22
LSO1YJR005C-A YBL029C-AQ3E756 94 aa7.43□□□□□ -1.22
LSO1YJR005C-A RSM7P47150 247 aa7.42□□□□□ -1.22
LSO1YJR005C-A DNA2P38859 1522 aa7.4□□□□□ -1.22
LSO1YJR005C-A AI2P03876 854 aa7.39□□□□□ -1.23
LSO1YJR005C-A NSR1P27476 414 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
LSO1YJR005C-A YAH1Q12184 172 aaKnown RBP7.39□□□□□ -1.23
LSO1YJR005C-A HIR3P47171 1648 aa7.35□□□□□ -1.23
LSO1YJR005C-A YAP5P40574 245 aa7.35□□□□□ -1.23
LSO1YJR005C-A VNX1P42839 908 aa7.31□□□□□ -1.24
LSO1YJR005C-A XRN1P22147 1528 aaKnown RBP7.29□□□□□ -1.24
LSO1YJR005C-A SPP1Q03012 353 aa7.28□□□□□ -1.24
LSO1YJR005C-A WSC3Q12215 556 aa7.28□□□□□ -1.24
LSO1YJR005C-A KOG1P38873 1557 aa7.27□□□□□ -1.25
LSO1YJR005C-A TFA1P36100 482 aa7.25□□□□□ -1.25
LSO1YJR005C-A REV3P14284 1504 aa7.22□□□□□ -1.25
LSO1YJR005C-A GTT3P39996 337 aa7.22□□□□□ -1.25
LSO1YJR005C-A YLR271WQ06152 274 aa7.22□□□□□ -1.25
LSO1YJR005C-A THO2P53552 1597 aaKnown RBP7.2□□□□□ -1.26
LSO1YJR005C-A TIF11P38912 153 aaKnown RBP7.17□□□□□ -1.26
LSO1YJR005C-A SIN3P22579 1536 aa7.17□□□□□ -1.26
LSO1YJR005C-A PSD2P53037 1138 aaKnown RBP7.16□□□□□ -1.26
LSO1YJR005C-A SSK2P53599 1579 aa7.13□□□□□ -1.27
LSO1YJR005C-A PIB1Q06651 286 aa7.13□□□□□ -1.27
LSO1YJR005C-A FKH1P40466 484 aa7.12□□□□□ -1.27
LSO1YJR005C-A YJL171CP46992 396 aa7.12□□□□□ -1.27
LSO1YJR005C-A AIR2Q12476 344 aaKnown RBP7.12□□□□□ -1.27
LSO1YJR005C-A BUD4P47136 1447 aa7.11□□□□□ -1.27
LSO1YJR005C-A MRM1P25270 412 aa7.11□□□□□ -1.27
LSO1YJR005C-A TAF2P23255 1407 aa7.1□□□□□ -1.27
LSO1YJR005C-A MYO2P19524 1574 aaKnown RBP7.09□□□□□ -1.27
LSO1YJR005C-A MIF2P35201 549 aa7.09□□□□□ -1.27
LSO1YJR005C-A LDB19Q12502 818 aa7.08□□□□□ -1.28
LSO1YJR005C-A ULI1P43604 169 aa7.07□□□□□ -1.28
LSO1YJR005C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
LSO1YJR005C-A ESP1Q03018 1630 aa7.07□□□□□ -1.28
LSO1YJR005C-A ATG2P53855 1592 aa7.04□□□□□ -1.28
LSO1YJR005C-A SSP1P38871 571 aa7.04□□□□□ -1.28
LSO1YJR005C-A ECM5Q03214 1411 aa7.03□□□□□ -1.28
LSO1YJR005C-A IOC2Q12072 812 aa7.02□□□□□ -1.29
LSO1YJR005C-A MDS3P53094 1487 aa7.01□□□□□ -1.29
LSO1YJR005C-A MSB4Q12317 492 aa7.01□□□□□ -1.29
LSO1YJR005C-A SKI3P17883 1432 aaKnown RBP7.01□□□□□ -1.29
LSO1YJR005C-A BMT6Q12291 365 aa6.99□□□□□ -1.29
LSO1YJR005C-A EAP1P36041 632 aaKnown RBP6.98□□□□□ -1.29
LSO1YJR005C-A YMR1P47147 688 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms