RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeastyeast

Gene RPL39, Length 156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL39YJL189W MTC1P47018 478 aaKnown RBP11.64□□□□□ -0.55
RPL39YJL189W FAP1P53971 965 aa10.8□□□□□ -0.68
RPL39YJL189W DRS1P32892 752 aaKnown RBP10.69□□□□□ -0.7
RPL39YJL189W PRY3P47033 881 aa10.16□□□□□ -0.78
RPL39YJL189W PRI1P10363 409 aa9.95□□□□□ -0.82
RPL39YJL189W AAD16Q02895 342 aa9.91□□□□□ -0.82
RPL39YJL189W ISW2Q08773 1120 aa9.67□□□□□ -0.86
RPL39YJL189W RPG1P38249 964 aaKnown RBP9.65□□□□□ -0.86
RPL39YJL189W YCK3P39962 524 aa9.63□□□□□ -0.87
RPL39YJL189W TSR3Q12094 313 aaKnown RBP9.46□□□□□ -0.9
RPL39YJL189W DIP2Q12220 943 aaPredicted RBP9.45□□□□□ -0.9
RPL39YJL189W HAA1Q12753 694 aaKnown RBP9.42□□□□□ -0.9
RPL39YJL189W RSE1Q04693 1361 aaKnown RBP9.16□□□□□ -0.94
RPL39YJL189W AVT3P36062 692 aa9.02□□□□□ -0.97
RPL39YJL189W MRPL32P25348 183 aa9.01□□□□□ -0.97
RPL39YJL189W RPL17AP05740 184 aaKnown RBP8.93□□□□□ -0.98
RPL39YJL189W RPL17BP46990 184 aaKnown RBP8.93□□□□□ -0.98
RPL39YJL189W REB1P21538 810 aa8.88□□□□□ -0.99
RPL39YJL189W BFR2Q06631 534 aaKnown RBP8.76□□□□□ -1.01
RPL39YJL189W YGL015CP33199 130 aa8.67□□□□□ -1.02
RPL39YJL189W CDC27P38042 758 aa8.59□□□□□ -1.03
RPL39YJL189W SPT21P35209 758 aa8.5□□□□□ -1.05
RPL39YJL189W YKR023WP36119 530 aaKnown RBP8.49□□□□□ -1.05
RPL39YJL189W DCD1P06773 312 aa8.37□□□□□ -1.07
RPL39YJL189W HOP09932 586 aa8.37□□□□□ -1.07
RPL39YJL189W MAP2P38174 421 aaKnown RBP8.34□□□□□ -1.07
RPL39YJL189W TFC8Q12308 588 aa8.29□□□□□ -1.08
RPL39YJL189W UBP10P53874 792 aaPredicted RBP8.24□□□□□ -1.09
RPL39YJL189W RIM101P33400 625 aa8.14□□□□□ -1.11
RPL39YJL189W SCY1P53009 804 aa8.13□□□□□ -1.11
RPL39YJL189W BUD31P25337 157 aaPredicted RBP8.05□□□□□ -1.12
RPL39YJL189W BCH2P36122 765 aa8.04□□□□□ -1.12
RPL39YJL189W SLX5P32828 619 aaKnown RBP7.98□□□□□ -1.13
RPL39YJL189W OXP1P28273 1286 aa7.92□□□□□ -1.14
RPL39YJL189W TIF4632P39936 914 aaKnown RBP7.92□□□□□ -1.14
RPL39YJL189W TGL3P40308 642 aa7.88□□□□□ -1.15
RPL39YJL189W EPS1P40557 701 aa7.81□□□□□ -1.16
RPL39YJL189W BDF1P35817 686 aa7.78□□□□□ -1.16
RPL39YJL189W PTP3P40048 928 aa7.78□□□□□ -1.16
RPL39YJL189W YIL055CP40523 627 aaKnown RBP7.75□□□□□ -1.17
RPL39YJL189W UBP9P39967 754 aa7.7□□□□□ -1.18
RPL39YJL189W YAH1Q12184 172 aaKnown RBP7.69□□□□□ -1.18
RPL39YJL189W SIS1P25294 352 aaKnown RBP7.68□□□□□ -1.18
RPL39YJL189W RSM7P47150 247 aa7.64□□□□□ -1.19
RPL39YJL189W AI2P03876 854 aa7.6□□□□□ -1.19
RPL39YJL189W BBC1P47068 1157 aa7.57□□□□□ -1.2
RPL39YJL189W YBL029C-AQ3E756 94 aa7.53□□□□□ -1.2
RPL39YJL189W MST1P07236 462 aa7.52□□□□□ -1.21
RPL39YJL189W YOR238WQ08634 303 aa7.52□□□□□ -1.21
RPL39YJL189W YLR271WQ06152 274 aa7.5□□□□□ -1.21
RPL39YJL189W TFA1P36100 482 aa7.48□□□□□ -1.21
RPL39YJL189W YAP5P40574 245 aa7.42□□□□□ -1.22
RPL39YJL189W NSR1P27476 414 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22 RIP-Chip
RPL39YJL189W VNX1P42839 908 aa7.4□□□□□ -1.22
RPL39YJL189W WSC3Q12215 556 aa7.4□□□□□ -1.22
RPL39YJL189W PSD2P53037 1138 aaKnown RBP7.38□□□□□ -1.23
RPL39YJL189W PIB1Q06651 286 aa7.36□□□□□ -1.23
RPL39YJL189W MRM1P25270 412 aa7.34□□□□□ -1.23
RPL39YJL189W SPP1Q03012 353 aa7.34□□□□□ -1.23
RPL39YJL189W SSP1P38871 571 aa7.31□□□□□ -1.24
RPL39YJL189W GTT3P39996 337 aa7.28□□□□□ -1.24
RPL39YJL189W CST9Q06032 482 aa7.25□□□□□ -1.25
RPL39YJL189W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
RPL39YJL189W TIF11P38912 153 aaKnown RBP7.23□□□□□ -1.25
RPL39YJL189W AIR2Q12476 344 aaKnown RBP7.18□□□□□ -1.26
RPL39YJL189W YFR006WP43590 535 aa7.17□□□□□ -1.26
RPL39YJL189W VPS29P38759 282 aa7.16□□□□□ -1.26
RPL39YJL189W ULI1P43604 169 aa7.16□□□□□ -1.26
RPL39YJL189W FKH1P40466 484 aa7.15□□□□□ -1.26
RPL39YJL189W LDB19Q12502 818 aa7.15□□□□□ -1.26
RPL39YJL189W DBP1P24784 617 aaKnown RBP7.14□□□□□ -1.27
RPL39YJL189W RCR1P38212 213 aa7.13□□□□□ -1.27
RPL39YJL189W MGA2P40578 1113 aa7.13□□□□□ -1.27
RPL39YJL189W IOC2Q12072 812 aa7.13□□□□□ -1.27
RPL39YJL189W YMR1P47147 688 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
RPL39YJL189W RTG3P38165 486 aa7.11□□□□□ -1.27
RPL39YJL189W STS1P38637 319 aa7.1□□□□□ -1.27
RPL39YJL189W SET4P42948 560 aa7.1□□□□□ -1.27
RPL39YJL189W YJL171CP46992 396 aa7.1□□□□□ -1.27
RPL39YJL189W YOL036WQ08206 761 aa7.08□□□□□ -1.28
RPL39YJL189W TRP5P00931 707 aaKnown RBP7.04□□□□□ -1.28
RPL39YJL189W VMA1P17255 1071 aaKnown RBP7.04□□□□□ -1.28
RPL39YJL189W MSB4Q12317 492 aa7.04□□□□□ -1.28
RPL39YJL189W RTG1P32607 177 aa7□□□□□ -1.29
RPL39YJL189W EAP1P36041 632 aaKnown RBP7□□□□□ -1.29
RPL39YJL189W BMT6Q12291 365 aa6.99□□□□□ -1.29
RPL39YJL189W SAM3Q08986 587 aa6.96□□□□□ -1.3
RPL39YJL189W NCR1Q12200 1170 aa6.94□□□□□ -1.3
RPL39YJL189W YNL035CP53962 389 aaKnown RBP6.92□□□□□ -1.3
RPL39YJL189W GYP5Q12344 894 aa6.89□□□□□ -1.31
RPL39YJL189W DCW1P36091 449 aa6.88□□□□□ -1.31
RPL39YJL189W SEC61P32915 480 aa6.87□□□□□ -1.31
RPL39YJL189W DAN4P47179 1161 aa6.85□□□□□ -1.31
RPL39YJL189W SAP30P38429 201 aa6.82□□□□□ -1.32
RPL39YJL189W HTA1P04911 132 aaKnown RBP6.81□□□□□ -1.32
RPL39YJL189W HTA2P04912 132 aa6.81□□□□□ -1.32
RPL39YJL189W RAM2P29703 316 aa6.81□□□□□ -1.32
RPL39YJL189W TFG1P41895 735 aaPredicted RBP6.81□□□□□ -1.32
RPL39YJL189W MIF2P35201 549 aa6.8□□□□□ -1.32
RPL39YJL189W YEL023CP39992 682 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms