RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C MTC1P47018 478 aaKnown RBP18.52■□□□□ 0.56
CTK2YJL006C DRS1P32892 752 aaKnown RBP17.1■□□□□ 0.33
CTK2YJL006C FAP1P53971 965 aa16.96■□□□□ 0.31
CTK2YJL006C PRY3P47033 881 aa15.93■□□□□ 0.14
CTK2YJL006C PRI1P10363 409 aa15.74■□□□□ 0.11
CTK2YJL006C AAD16Q02895 342 aa15.69■□□□□ 0.1
CTK2YJL006C ISW2Q08773 1120 aa15.42■□□□□ 0.06
CTK2YJL006C RPG1P38249 964 aaKnown RBP15.27■□□□□ 0.04
CTK2YJL006C DIP2Q12220 943 aaPredicted RBP15.07■□□□□ 0
CTK2YJL006C YCK3P39962 524 aa14.99□□□□□ -0.01
CTK2YJL006C HAA1Q12753 694 aaKnown RBP14.93□□□□□ -0.02
CTK2YJL006C TSR3Q12094 313 aaKnown RBP14.89□□□□□ -0.03
CTK2YJL006C RSE1Q04693 1361 aaKnown RBP14.63□□□□□ -0.07
CTK2YJL006C AVT3P36062 692 aa14.45□□□□□ -0.1
CTK2YJL006C MRPL32P25348 183 aa14.31□□□□□ -0.12
CTK2YJL006C RPL17AP05740 184 aaKnown RBP14.19□□□□□ -0.14
CTK2YJL006C RPL17BP46990 184 aaKnown RBP14.19□□□□□ -0.14
CTK2YJL006C REB1P21538 810 aa14.16□□□□□ -0.14
CTK2YJL006C BFR2Q06631 534 aaKnown RBP14.11□□□□□ -0.15
CTK2YJL006C YGL015CP33199 130 aa13.79□□□□□ -0.2
CTK2YJL006C CDC27P38042 758 aa13.53□□□□□ -0.24
CTK2YJL006C SPT21P35209 758 aa13.52□□□□□ -0.25
CTK2YJL006C YKR023WP36119 530 aaKnown RBP13.45□□□□□ -0.26
CTK2YJL006C HOP09932 586 aa13.19□□□□□ -0.3
CTK2YJL006C UBP10P53874 792 aaPredicted RBP13.17□□□□□ -0.3
CTK2YJL006C TFC8Q12308 588 aa13.17□□□□□ -0.3
CTK2YJL006C MAP2P38174 421 aaKnown RBP13.14□□□□□ -0.31
CTK2YJL006C DCD1P06773 312 aa13.13□□□□□ -0.31
CTK2YJL006C RIM101P33400 625 aa13.03□□□□□ -0.32
CTK2YJL006C SCY1P53009 804 aa12.85□□□□□ -0.35
CTK2YJL006C BCH2P36122 765 aa12.74□□□□□ -0.37
CTK2YJL006C BUD31P25337 157 aaPredicted RBP12.7□□□□□ -0.38
CTK2YJL006C SLX5P32828 619 aaKnown RBP12.7□□□□□ -0.38
CTK2YJL006C TIF4632P39936 914 aaKnown RBP12.66□□□□□ -0.38
CTK2YJL006C TGL3P40308 642 aa12.6□□□□□ -0.39
CTK2YJL006C OXP1P28273 1286 aa12.58□□□□□ -0.4
CTK2YJL006C YIL055CP40523 627 aaKnown RBP12.43□□□□□ -0.42
CTK2YJL006C PTP3P40048 928 aa12.42□□□□□ -0.42
CTK2YJL006C EPS1P40557 701 aa12.4□□□□□ -0.42
CTK2YJL006C BDF1P35817 686 aa12.36□□□□□ -0.43
CTK2YJL006C UBP9P39967 754 aa12.29□□□□□ -0.44
CTK2YJL006C TFA1P36100 482 aa12.23□□□□□ -0.45
CTK2YJL006C RSM7P47150 247 aa12.23□□□□□ -0.45
CTK2YJL006C YAH1Q12184 172 aaKnown RBP12.21□□□□□ -0.45
CTK2YJL006C BBC1P47068 1157 aa12.17□□□□□ -0.46
CTK2YJL006C AI2P03876 854 aa12.13□□□□□ -0.47
CTK2YJL006C SIS1P25294 352 aaKnown RBP12.11□□□□□ -0.47
CTK2YJL006C MST1P07236 462 aa12.02□□□□□ -0.49
CTK2YJL006C YOR238WQ08634 303 aa12.01□□□□□ -0.49
CTK2YJL006C YLR271WQ06152 274 aa11.97□□□□□ -0.49
CTK2YJL006C NSR1P27476 414 aaKnown RBP RIP-Chip data11.94□□□□□ -0.5not detected
CTK2YJL006C YAP5P40574 245 aa11.89□□□□□ -0.51
CTK2YJL006C YBL029C-AQ3E756 94 aa11.88□□□□□ -0.51
CTK2YJL006C PSD2P53037 1138 aaKnown RBP11.8□□□□□ -0.52
CTK2YJL006C SSP1P38871 571 aa11.78□□□□□ -0.52
CTK2YJL006C VNX1P42839 908 aa11.75□□□□□ -0.53
CTK2YJL006C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.73□□□□□ -0.53not detected
CTK2YJL006C WSC3Q12215 556 aa11.7□□□□□ -0.54
CTK2YJL006C MRM1P25270 412 aa11.69□□□□□ -0.54
CTK2YJL006C SPP1Q03012 353 aa11.66□□□□□ -0.54
CTK2YJL006C GTT3P39996 337 aa11.65□□□□□ -0.54
CTK2YJL006C PIB1Q06651 286 aa11.59□□□□□ -0.55
CTK2YJL006C CST9Q06032 482 aa11.54□□□□□ -0.56
CTK2YJL006C TIF11P38912 153 aaKnown RBP11.53□□□□□ -0.56
CTK2YJL006C MGA2P40578 1113 aa11.51□□□□□ -0.57
CTK2YJL006C RTG3P38165 486 aa11.43□□□□□ -0.58
CTK2YJL006C VPS29P38759 282 aa11.42□□□□□ -0.58
CTK2YJL006C YMR1P47147 688 aaKnown RBP RIP-Chip data11.42□□□□□ -0.58not detected
CTK2YJL006C ULI1P43604 169 aa11.4□□□□□ -0.58
CTK2YJL006C DBP1P24784 617 aaKnown RBP11.38□□□□□ -0.59
CTK2YJL006C AIR2Q12476 344 aaKnown RBP11.38□□□□□ -0.59
CTK2YJL006C FKH1P40466 484 aa11.36□□□□□ -0.59
CTK2YJL006C LDB19Q12502 818 aa11.36□□□□□ -0.59
CTK2YJL006C YFR006WP43590 535 aa11.35□□□□□ -0.59
CTK2YJL006C IOC2Q12072 812 aa11.34□□□□□ -0.59
CTK2YJL006C YJL171CP46992 396 aa11.33□□□□□ -0.6
CTK2YJL006C MSB4Q12317 492 aa11.33□□□□□ -0.6
CTK2YJL006C STS1P38637 319 aa11.29□□□□□ -0.6
CTK2YJL006C SET4P42948 560 aa11.29□□□□□ -0.6
CTK2YJL006C YOL036WQ08206 761 aa11.29□□□□□ -0.6
CTK2YJL006C EAP1P36041 632 aaKnown RBP11.28□□□□□ -0.6
CTK2YJL006C RCR1P38212 213 aa11.28□□□□□ -0.6
CTK2YJL006C VMA1P17255 1071 aaKnown RBP11.25□□□□□ -0.61
CTK2YJL006C TRP5P00931 707 aaKnown RBP11.2□□□□□ -0.62
CTK2YJL006C SAM3Q08986 587 aa11.18□□□□□ -0.62
CTK2YJL006C RTG1P32607 177 aa11.15□□□□□ -0.62
CTK2YJL006C BMT6Q12291 365 aa11.15□□□□□ -0.62
CTK2YJL006C YNL035CP53962 389 aaKnown RBP11.09□□□□□ -0.63
CTK2YJL006C NCR1Q12200 1170 aa11.09□□□□□ -0.63
CTK2YJL006C GYP5Q12344 894 aa11.05□□□□□ -0.64
CTK2YJL006C SEC61P32915 480 aa11.04□□□□□ -0.64
CTK2YJL006C ABP1P15891 592 aaKnown RBP11□□□□□ -0.65
CTK2YJL006C DCW1P36091 449 aa10.97□□□□□ -0.65
CTK2YJL006C HTA1P04911 132 aaKnown RBP10.96□□□□□ -0.65
CTK2YJL006C HTA2P04912 132 aa10.96□□□□□ -0.65
CTK2YJL006C TFG1P41895 735 aaPredicted RBP10.95□□□□□ -0.66
CTK2YJL006C JIP4Q03361 876 aa10.95□□□□□ -0.66
CTK2YJL006C DAN4P47179 1161 aa10.93□□□□□ -0.66
CTK2YJL006C RAM2P29703 316 aa10.9□□□□□ -0.66
CTK2YJL006C MAK11P20484 414 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms