RNA–Protein interactions for RNA: YJL004C

SYS1, Transcript of Integral membrane protein of the Golgi, yeastyeast

Gene SYS1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SYS1YJL004C MTC1P47018 478 aaKnown RBP14.72□□□□□ -0.05
SYS1YJL004C DRS1P32892 752 aaKnown RBP13.75□□□□□ -0.21
SYS1YJL004C FAP1P53971 965 aa13.23□□□□□ -0.29
SYS1YJL004C PRY3P47033 881 aa12.42□□□□□ -0.42
SYS1YJL004C PRI1P10363 409 aa12.4□□□□□ -0.42
SYS1YJL004C AAD16Q02895 342 aa12.33□□□□□ -0.44
SYS1YJL004C ISW2Q08773 1120 aa12.25□□□□□ -0.45
SYS1YJL004C RPG1P38249 964 aaKnown RBP12.06□□□□□ -0.48
SYS1YJL004C DIP2Q12220 943 aaPredicted RBP12.06□□□□□ -0.48
SYS1YJL004C HAA1Q12753 694 aaKnown RBP11.71□□□□□ -0.53
SYS1YJL004C RSE1Q04693 1361 aaKnown RBP11.69□□□□□ -0.54
SYS1YJL004C TSR3Q12094 313 aaKnown RBP11.69□□□□□ -0.54
SYS1YJL004C YCK3P39962 524 aa11.63□□□□□ -0.55
SYS1YJL004C AVT3P36062 692 aa11.61□□□□□ -0.55
SYS1YJL004C BFR2Q06631 534 aaKnown RBP11.47□□□□□ -0.57
SYS1YJL004C MRPL32P25348 183 aa11.3□□□□□ -0.6
SYS1YJL004C RPL17AP05740 184 aaKnown RBP11.29□□□□□ -0.6
SYS1YJL004C RPL17BP46990 184 aaKnown RBP11.29□□□□□ -0.6
SYS1YJL004C REB1P21538 810 aa11.27□□□□□ -0.61
SYS1YJL004C YGL015CP33199 130 aa10.85□□□□□ -0.67
SYS1YJL004C SPT21P35209 758 aa10.78□□□□□ -0.68
SYS1YJL004C CDC27P38042 758 aa10.66□□□□□ -0.7
SYS1YJL004C YKR023WP36119 530 aaKnown RBP10.64□□□□□ -0.71
SYS1YJL004C UBP10P53874 792 aaPredicted RBP10.45□□□□□ -0.74
SYS1YJL004C TFC8Q12308 588 aa10.45□□□□□ -0.74
SYS1YJL004C HOP09932 586 aa10.42□□□□□ -0.74
SYS1YJL004C RIM101P33400 625 aa10.42□□□□□ -0.74
SYS1YJL004C DCD1P06773 312 aa10.34□□□□□ -0.75
SYS1YJL004C MAP2P38174 421 aaKnown RBP10.34□□□□□ -0.75
SYS1YJL004C SCY1P53009 804 aa10.16□□□□□ -0.78
SYS1YJL004C BCH2P36122 765 aa10.09□□□□□ -0.79
SYS1YJL004C TFA1P36100 482 aa10.08□□□□□ -0.8
SYS1YJL004C SLX5P32828 619 aaKnown RBP10.07□□□□□ -0.8
SYS1YJL004C TIF4632P39936 914 aaKnown RBP10.05□□□□□ -0.8
SYS1YJL004C OXP1P28273 1286 aa10.03□□□□□ -0.8
SYS1YJL004C TGL3P40308 642 aa9.98□□□□□ -0.81
SYS1YJL004C YIL055CP40523 627 aaKnown RBP9.97□□□□□ -0.81
SYS1YJL004C PTP3P40048 928 aa9.95□□□□□ -0.82
SYS1YJL004C BUD31P25337 157 aaPredicted RBP9.91□□□□□ -0.82
SYS1YJL004C EPS1P40557 701 aa9.86□□□□□ -0.83
SYS1YJL004C BDF1P35817 686 aa9.81□□□□□ -0.84
SYS1YJL004C RSM7P47150 247 aa9.8□□□□□ -0.84
SYS1YJL004C BBC1P47068 1157 aa9.77□□□□□ -0.85
SYS1YJL004C YAH1Q12184 172 aaKnown RBP9.76□□□□□ -0.85
SYS1YJL004C UBP9P39967 754 aa9.71□□□□□ -0.86
SYS1YJL004C AI2P03876 854 aa9.7□□□□□ -0.86
SYS1YJL004C YLR271WQ06152 274 aa9.6□□□□□ -0.87
SYS1YJL004C NSR1P27476 414 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
SYS1YJL004C YOR238WQ08634 303 aa9.54□□□□□ -0.88
SYS1YJL004C MST1P07236 462 aa9.53□□□□□ -0.88
SYS1YJL004C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.53□□□□□ -0.88not detected
SYS1YJL004C SSP1P38871 571 aa9.52□□□□□ -0.89
SYS1YJL004C YAP5P40574 245 aa9.48□□□□□ -0.89
SYS1YJL004C PSD2P53037 1138 aaKnown RBP9.47□□□□□ -0.89
SYS1YJL004C SIS1P25294 352 aaKnown RBP9.46□□□□□ -0.9
SYS1YJL004C YBL029C-AQ3E756 94 aa9.35□□□□□ -0.91
SYS1YJL004C MRM1P25270 412 aa9.34□□□□□ -0.91
SYS1YJL004C MGA2P40578 1113 aa9.31□□□□□ -0.92
SYS1YJL004C GTT3P39996 337 aa9.29□□□□□ -0.92
SYS1YJL004C VNX1P42839 908 aa9.28□□□□□ -0.92
SYS1YJL004C CST9Q06032 482 aa9.24□□□□□ -0.93
SYS1YJL004C WSC3Q12215 556 aa9.24□□□□□ -0.93
SYS1YJL004C SPP1Q03012 353 aa9.22□□□□□ -0.93
SYS1YJL004C RTG3P38165 486 aa9.18□□□□□ -0.94
SYS1YJL004C PIB1Q06651 286 aa9.17□□□□□ -0.94
SYS1YJL004C YMR1P47147 688 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
SYS1YJL004C TIF11P38912 153 aaKnown RBP9.15□□□□□ -0.94
SYS1YJL004C VPS29P38759 282 aa9.12□□□□□ -0.95
SYS1YJL004C DBP1P24784 617 aaKnown RBP9.08□□□□□ -0.96
SYS1YJL004C MSB4Q12317 492 aa9.08□□□□□ -0.96
SYS1YJL004C EAP1P36041 632 aaKnown RBP9.03□□□□□ -0.96
SYS1YJL004C ULI1P43604 169 aa9.03□□□□□ -0.96
SYS1YJL004C STS1P38637 319 aa9.02□□□□□ -0.97
SYS1YJL004C YFR006WP43590 535 aa9.02□□□□□ -0.97
SYS1YJL004C RCR1P38212 213 aa9□□□□□ -0.97
SYS1YJL004C FKH1P40466 484 aa9□□□□□ -0.97
SYS1YJL004C YOL036WQ08206 761 aa9□□□□□ -0.97
SYS1YJL004C VMA1P17255 1071 aaKnown RBP8.99□□□□□ -0.97
SYS1YJL004C LDB19Q12502 818 aa8.98□□□□□ -0.97
SYS1YJL004C IOC2Q12072 812 aa8.97□□□□□ -0.97
SYS1YJL004C AIR2Q12476 344 aaKnown RBP8.97□□□□□ -0.97
SYS1YJL004C SET4P42948 560 aa8.96□□□□□ -0.98
SYS1YJL004C SAM3Q08986 587 aa8.96□□□□□ -0.98
SYS1YJL004C YJL171CP46992 396 aa8.95□□□□□ -0.98
SYS1YJL004C TRP5P00931 707 aaKnown RBP8.89□□□□□ -0.99
SYS1YJL004C ABP1P15891 592 aaKnown RBP8.89□□□□□ -0.99
SYS1YJL004C RTG1P32607 177 aa8.85□□□□□ -0.99
SYS1YJL004C GYP5Q12344 894 aa8.84□□□□□ -0.99
SYS1YJL004C YNL035CP53962 389 aaKnown RBP8.83□□□□□ -1
SYS1YJL004C BMT6Q12291 365 aa8.83□□□□□ -1
SYS1YJL004C SEC61P32915 480 aa8.81□□□□□ -1
SYS1YJL004C MAK11P20484 414 aaKnown RBP8.8□□□□□ -1
SYS1YJL004C NCR1Q12200 1170 aa8.8□□□□□ -1
SYS1YJL004C HTA1P04911 132 aaKnown RBP8.78□□□□□ -1
SYS1YJL004C HTA2P04912 132 aa8.78□□□□□ -1
SYS1YJL004C RAM2P29703 316 aa8.78□□□□□ -1
SYS1YJL004C JIP4Q03361 876 aa8.78□□□□□ -1
SYS1YJL004C TFG1P41895 735 aaPredicted RBP8.76□□□□□ -1.01
SYS1YJL004C DCW1P36091 449 aa8.74□□□□□ -1.01
SYS1YJL004C MIF2P35201 549 aa8.73□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms