RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeastyeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPS6YIR039C MTC1P47018 478 aaKnown RBP11.09□□□□□ -0.63
YPS6YIR039C FAP1P53971 965 aa10.68□□□□□ -0.7
YPS6YIR039C PRY3P47033 881 aa10.06□□□□□ -0.8
YPS6YIR039C DRS1P32892 752 aaKnown RBP9.75□□□□□ -0.85
YPS6YIR039C AAD16Q02895 342 aa9.71□□□□□ -0.86
YPS6YIR039C PRI1P10363 409 aa9.69□□□□□ -0.86
YPS6YIR039C YCK3P39962 524 aa9.44□□□□□ -0.9
YPS6YIR039C HAA1Q12753 694 aaKnown RBP9.4□□□□□ -0.9
YPS6YIR039C ISW2Q08773 1120 aa9.34□□□□□ -0.91
YPS6YIR039C RPG1P38249 964 aaKnown RBP9.25□□□□□ -0.93
YPS6YIR039C TSR3Q12094 313 aaKnown RBP9.12□□□□□ -0.95
YPS6YIR039C MRPL32P25348 183 aa8.78□□□□□ -1
YPS6YIR039C DIP2Q12220 943 aaPredicted RBP8.76□□□□□ -1.01
YPS6YIR039C RSE1Q04693 1361 aaKnown RBP8.65□□□□□ -1.02
YPS6YIR039C YGL015CP33199 130 aa8.58□□□□□ -1.04
YPS6YIR039C REB1P21538 810 aa8.44□□□□□ -1.06
YPS6YIR039C RPL17AP05740 184 aaKnown RBP8.4□□□□□ -1.06
YPS6YIR039C RPL17BP46990 184 aaKnown RBP8.4□□□□□ -1.06
YPS6YIR039C AVT3P36062 692 aa8.27□□□□□ -1.09
YPS6YIR039C CDC27P38042 758 aa8.21□□□□□ -1.1
YPS6YIR039C BUD31P25337 157 aaPredicted RBP8.14□□□□□ -1.11
YPS6YIR039C UBP10P53874 792 aaPredicted RBP8.08□□□□□ -1.12
YPS6YIR039C YKR023WP36119 530 aaKnown RBP8.04□□□□□ -1.12
YPS6YIR039C MAP2P38174 421 aaKnown RBP8.03□□□□□ -1.12
YPS6YIR039C SPT21P35209 758 aa8□□□□□ -1.13
YPS6YIR039C BFR2Q06631 534 aaKnown RBP7.95□□□□□ -1.14
YPS6YIR039C HOP09932 586 aa7.89□□□□□ -1.15
YPS6YIR039C TFC8Q12308 588 aa7.88□□□□□ -1.15
YPS6YIR039C DCD1P06773 312 aa7.87□□□□□ -1.15
YPS6YIR039C TIF4632P39936 914 aaKnown RBP7.77□□□□□ -1.17
YPS6YIR039C SCY1P53009 804 aa7.77□□□□□ -1.17
YPS6YIR039C TGL3P40308 642 aa7.72□□□□□ -1.17
YPS6YIR039C SLX5P32828 619 aaKnown RBP7.71□□□□□ -1.17
YPS6YIR039C SIS1P25294 352 aaKnown RBP7.7□□□□□ -1.18
YPS6YIR039C UBP9P39967 754 aa7.69□□□□□ -1.18
YPS6YIR039C BCH2P36122 765 aa7.6□□□□□ -1.19
YPS6YIR039C RIM101P33400 625 aa7.58□□□□□ -1.2
YPS6YIR039C TFA1P36100 482 aa7.41□□□□□ -1.22
YPS6YIR039C EPS1P40557 701 aa7.38□□□□□ -1.23
YPS6YIR039C BDF1P35817 686 aa7.36□□□□□ -1.23
YPS6YIR039C MST1P07236 462 aa7.32□□□□□ -1.24
YPS6YIR039C YBL029C-AQ3E756 94 aa7.31□□□□□ -1.24
YPS6YIR039C OXP1P28273 1286 aa7.3□□□□□ -1.24
YPS6YIR039C YOR238WQ08634 303 aa7.28□□□□□ -1.24
YPS6YIR039C PTP3P40048 928 aa7.24□□□□□ -1.25
YPS6YIR039C YIL055CP40523 627 aaKnown RBP7.22□□□□□ -1.25
YPS6YIR039C NSR1P27476 414 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
YPS6YIR039C VNX1P42839 908 aa7.2□□□□□ -1.26
YPS6YIR039C YAP5P40574 245 aa7.15□□□□□ -1.27
YPS6YIR039C BBC1P47068 1157 aa7.15□□□□□ -1.27
YPS6YIR039C SPP1Q03012 353 aa7.15□□□□□ -1.27
YPS6YIR039C WSC3Q12215 556 aa7.11□□□□□ -1.27
YPS6YIR039C RSM7P47150 247 aa7.1□□□□□ -1.27
YPS6YIR039C AI2P03876 854 aa7.09□□□□□ -1.28
YPS6YIR039C AIR2Q12476 344 aaKnown RBP7.04□□□□□ -1.28
YPS6YIR039C TIF11P38912 153 aaKnown RBP7.03□□□□□ -1.28
YPS6YIR039C YJL171CP46992 396 aa7.03□□□□□ -1.28
YPS6YIR039C FKH1P40466 484 aa7.02□□□□□ -1.29
YPS6YIR039C GTT3P39996 337 aa7.01□□□□□ -1.29
YPS6YIR039C YAH1Q12184 172 aaKnown RBP7.01□□□□□ -1.29
YPS6YIR039C LDB19Q12502 818 aa6.94□□□□□ -1.3
YPS6YIR039C ULI1P43604 169 aa6.91□□□□□ -1.3
YPS6YIR039C PIB1Q06651 286 aa6.89□□□□□ -1.31
YPS6YIR039C IOC2Q12072 812 aa6.89□□□□□ -1.31
YPS6YIR039C BMT6Q12291 365 aa6.88□□□□□ -1.31
YPS6YIR039C YLR271WQ06152 274 aa6.87□□□□□ -1.31
YPS6YIR039C PSD2P53037 1138 aaKnown RBP6.84□□□□□ -1.31
YPS6YIR039C MSB4Q12317 492 aa6.82□□□□□ -1.32
YPS6YIR039C MRM1P25270 412 aa6.8□□□□□ -1.32
YPS6YIR039C EAP1P36041 632 aaKnown RBP6.79□□□□□ -1.32
YPS6YIR039C RTG1P32607 177 aa6.76□□□□□ -1.33
YPS6YIR039C YOL036WQ08206 761 aa6.75□□□□□ -1.33
YPS6YIR039C SET4P42948 560 aa6.74□□□□□ -1.33
YPS6YIR039C TRP5P00931 707 aaKnown RBP6.72□□□□□ -1.33
YPS6YIR039C NCR1Q12200 1170 aa6.72□□□□□ -1.33
YPS6YIR039C YMR1P47147 688 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
YPS6YIR039C YNL035CP53962 389 aaKnown RBP6.69□□□□□ -1.34
YPS6YIR039C RQC2Q12532 1038 aaKnown RBP6.68□□□□□ -1.34
YPS6YIR039C SEC61P32915 480 aa6.68□□□□□ -1.34
YPS6YIR039C DBP1P24784 617 aaKnown RBP6.67□□□□□ -1.34
YPS6YIR039C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
YPS6YIR039C VPS29P38759 282 aa6.65□□□□□ -1.35
YPS6YIR039C YFR006WP43590 535 aa6.65□□□□□ -1.35
YPS6YIR039C VMA1P17255 1071 aaKnown RBP6.64□□□□□ -1.35
YPS6YIR039C SSP1P38871 571 aa6.62□□□□□ -1.35
YPS6YIR039C RTG3P38165 486 aa6.61□□□□□ -1.35
YPS6YIR039C TFG1P41895 735 aaPredicted RBP6.61□□□□□ -1.35
YPS6YIR039C SAM3Q08986 587 aa6.61□□□□□ -1.35
YPS6YIR039C STS1P38637 319 aa6.6□□□□□ -1.35
YPS6YIR039C CST9Q06032 482 aa6.58□□□□□ -1.36
YPS6YIR039C SAP30P38429 201 aa6.56□□□□□ -1.36
YPS6YIR039C DAN4P47179 1161 aa6.55□□□□□ -1.36
YPS6YIR039C MGA2P40578 1113 aa6.54□□□□□ -1.36
YPS6YIR039C JIP4Q03361 876 aa6.54□□□□□ -1.36
YPS6YIR039C BCK2P33306 851 aa6.54□□□□□ -1.36
YPS6YIR039C ABP1P15891 592 aaKnown RBP6.53□□□□□ -1.36
YPS6YIR039C YDL129WQ07555 291 aa6.51□□□□□ -1.37
YPS6YIR039C CHL1P22516 861 aaPredicted RBP6.5□□□□□ -1.37
YPS6YIR039C GYP5Q12344 894 aa6.5□□□□□ -1.37
YPS6YIR039C RCR1P38212 213 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms