RNA–Protein interactions for RNA: YIL135C

VHS2, Transcript of Regulator of septin dynamics, yeastyeast

Gene VHS2, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS2YIL135C MTC1P47018 478 aaKnown RBP18.31■□□□□ 0.52
VHS2YIL135C FAP1P53971 965 aa17.53■□□□□ 0.4
VHS2YIL135C PRY3P47033 881 aa16.51■□□□□ 0.23
VHS2YIL135C DRS1P32892 752 aaKnown RBP16.22■□□□□ 0.19
VHS2YIL135C AAD16Q02895 342 aa15.96■□□□□ 0.15
VHS2YIL135C PRI1P10363 409 aa15.94■□□□□ 0.14
VHS2YIL135C YCK3P39962 524 aa15.52■□□□□ 0.08
VHS2YIL135C HAA1Q12753 694 aaKnown RBP15.41■□□□□ 0.06
VHS2YIL135C ISW2Q08773 1120 aa15.39■□□□□ 0.05
VHS2YIL135C RPG1P38249 964 aaKnown RBP15.27■□□□□ 0.04
VHS2YIL135C TSR3Q12094 313 aaKnown RBP15.05■□□□□ -0
VHS2YIL135C DIP2Q12220 943 aaPredicted RBP14.55□□□□□ -0.08
VHS2YIL135C MRPL32P25348 183 aa14.45□□□□□ -0.1
VHS2YIL135C RSE1Q04693 1361 aaKnown RBP14.31□□□□□ -0.12
VHS2YIL135C YGL015CP33199 130 aa14.11□□□□□ -0.15
VHS2YIL135C REB1P21538 810 aa13.95□□□□□ -0.18
VHS2YIL135C RPL17AP05740 184 aaKnown RBP13.93□□□□□ -0.18
VHS2YIL135C RPL17BP46990 184 aaKnown RBP13.93□□□□□ -0.18
VHS2YIL135C AVT3P36062 692 aa13.74□□□□□ -0.21
VHS2YIL135C CDC27P38042 758 aa13.56□□□□□ -0.24
VHS2YIL135C BUD31P25337 157 aaPredicted RBP13.3□□□□□ -0.28
VHS2YIL135C YKR023WP36119 530 aaKnown RBP13.3□□□□□ -0.28
VHS2YIL135C UBP10P53874 792 aaPredicted RBP13.27□□□□□ -0.29
VHS2YIL135C MAP2P38174 421 aaKnown RBP13.24□□□□□ -0.29
VHS2YIL135C SPT21P35209 758 aa13.22□□□□□ -0.29
VHS2YIL135C BFR2Q06631 534 aaKnown RBP13.06□□□□□ -0.32
VHS2YIL135C HOP09932 586 aa13.05□□□□□ -0.32
VHS2YIL135C DCD1P06773 312 aa13.03□□□□□ -0.32
VHS2YIL135C TFC8Q12308 588 aa13.03□□□□□ -0.32
VHS2YIL135C SCY1P53009 804 aa12.83□□□□□ -0.36
VHS2YIL135C TIF4632P39936 914 aaKnown RBP12.76□□□□□ -0.37
VHS2YIL135C SLX5P32828 619 aaKnown RBP12.71□□□□□ -0.37
VHS2YIL135C TGL3P40308 642 aa12.71□□□□□ -0.37
VHS2YIL135C SIS1P25294 352 aaKnown RBP12.62□□□□□ -0.39
VHS2YIL135C UBP9P39967 754 aa12.61□□□□□ -0.39
VHS2YIL135C RIM101P33400 625 aa12.58□□□□□ -0.4
VHS2YIL135C BCH2P36122 765 aa12.58□□□□□ -0.4
VHS2YIL135C EPS1P40557 701 aa12.19□□□□□ -0.46
VHS2YIL135C BDF1P35817 686 aa12.17□□□□□ -0.46
VHS2YIL135C OXP1P28273 1286 aa12.13□□□□□ -0.47
VHS2YIL135C MST1P07236 462 aa12.05□□□□□ -0.48
VHS2YIL135C YBL029C-AQ3E756 94 aa12.03□□□□□ -0.48
VHS2YIL135C PTP3P40048 928 aa12.01□□□□□ -0.49
VHS2YIL135C YIL055CP40523 627 aaKnown RBP11.99□□□□□ -0.49
VHS2YIL135C YOR238WQ08634 303 aa11.99□□□□□ -0.49
VHS2YIL135C VNX1P42839 908 aa11.86□□□□□ -0.51
VHS2YIL135C NSR1P27476 414 aaKnown RBP RIP-Chip data11.84□□□□□ -0.51not detected
VHS2YIL135C BBC1P47068 1157 aa11.84□□□□□ -0.51
VHS2YIL135C RSM7P47150 247 aa11.79□□□□□ -0.52
VHS2YIL135C YAP5P40574 245 aa11.78□□□□□ -0.52
VHS2YIL135C AI2P03876 854 aa11.76□□□□□ -0.53
VHS2YIL135C SPP1Q03012 353 aa11.76□□□□□ -0.53
VHS2YIL135C WSC3Q12215 556 aa11.73□□□□□ -0.53
VHS2YIL135C YAH1Q12184 172 aaKnown RBP11.68□□□□□ -0.54
VHS2YIL135C TIF11P38912 153 aaKnown RBP11.58□□□□□ -0.56
VHS2YIL135C AIR2Q12476 344 aaKnown RBP11.58□□□□□ -0.56
VHS2YIL135C GTT3P39996 337 aa11.57□□□□□ -0.56
VHS2YIL135C YJL171CP46992 396 aa11.54□□□□□ -0.56
VHS2YIL135C FKH1P40466 484 aa11.52□□□□□ -0.57
VHS2YIL135C YLR271WQ06152 274 aa11.42□□□□□ -0.58
VHS2YIL135C PIB1Q06651 286 aa11.41□□□□□ -0.58
VHS2YIL135C LDB19Q12502 818 aa11.41□□□□□ -0.58
VHS2YIL135C ULI1P43604 169 aa11.39□□□□□ -0.59
VHS2YIL135C IOC2Q12072 812 aa11.35□□□□□ -0.59
VHS2YIL135C PSD2P53037 1138 aaKnown RBP11.34□□□□□ -0.59
VHS2YIL135C BMT6Q12291 365 aa11.3□□□□□ -0.6
VHS2YIL135C MRM1P25270 412 aa11.29□□□□□ -0.6
VHS2YIL135C MSB4Q12317 492 aa11.23□□□□□ -0.61
VHS2YIL135C TFA1P36100 482 aa11.2□□□□□ -0.62
VHS2YIL135C EAP1P36041 632 aaKnown RBP11.19□□□□□ -0.62
VHS2YIL135C SET4P42948 560 aa11.14□□□□□ -0.63
VHS2YIL135C RTG1P32607 177 aa11.13□□□□□ -0.63
VHS2YIL135C YOL036WQ08206 761 aa11.13□□□□□ -0.63
VHS2YIL135C TRP5P00931 707 aaKnown RBP11.11□□□□□ -0.63
VHS2YIL135C NCR1Q12200 1170 aa11.09□□□□□ -0.63
VHS2YIL135C YMR1P47147 688 aaKnown RBP RIP-Chip data11.08□□□□□ -0.64not detected
VHS2YIL135C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.08□□□□□ -0.64not detected
VHS2YIL135C DBP1P24784 617 aaKnown RBP11.07□□□□□ -0.64
VHS2YIL135C SSP1P38871 571 aa11.06□□□□□ -0.64
VHS2YIL135C VPS29P38759 282 aa11.05□□□□□ -0.64
VHS2YIL135C YFR006WP43590 535 aa11.04□□□□□ -0.64
VHS2YIL135C YNL035CP53962 389 aaKnown RBP11.02□□□□□ -0.65
VHS2YIL135C SEC61P32915 480 aa11□□□□□ -0.65
VHS2YIL135C RTG3P38165 486 aa10.99□□□□□ -0.65
VHS2YIL135C VMA1P17255 1071 aaKnown RBP10.98□□□□□ -0.65
VHS2YIL135C CST9Q06032 482 aa10.98□□□□□ -0.65
VHS2YIL135C STS1P38637 319 aa10.95□□□□□ -0.66
VHS2YIL135C SAM3Q08986 587 aa10.93□□□□□ -0.66
VHS2YIL135C TFG1P41895 735 aaPredicted RBP10.89□□□□□ -0.67
VHS2YIL135C MGA2P40578 1113 aa10.88□□□□□ -0.67
VHS2YIL135C SAP30P38429 201 aa10.82□□□□□ -0.68
VHS2YIL135C DAN4P47179 1161 aa10.81□□□□□ -0.68
VHS2YIL135C RCR1P38212 213 aa10.8□□□□□ -0.68
VHS2YIL135C JIP4Q03361 876 aa10.79□□□□□ -0.68
VHS2YIL135C GYP5Q12344 894 aa10.77□□□□□ -0.69
VHS2YIL135C ABP1P15891 592 aaKnown RBP10.75□□□□□ -0.69
VHS2YIL135C YDL129WQ07555 291 aa10.74□□□□□ -0.69
VHS2YIL135C BCK2P33306 851 aa10.73□□□□□ -0.69
VHS2YIL135C HTA1P04911 132 aaKnown RBP10.72□□□□□ -0.69
VHS2YIL135C HTA2P04912 132 aa10.72□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 964.3 ms