RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeastyeast

Gene RPB3, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB3YIL021W MTC1P47018 478 aaKnown RBP11.56□□□□□ -0.56
RPB3YIL021W DRS1P32892 752 aaKnown RBP10.87□□□□□ -0.67
RPB3YIL021W FAP1P53971 965 aa10.21□□□□□ -0.77
RPB3YIL021W PRI1P10363 409 aa9.7□□□□□ -0.86
RPB3YIL021W PRY3P47033 881 aa9.63□□□□□ -0.87
RPB3YIL021W AAD16Q02895 342 aa9.61□□□□□ -0.87
RPB3YIL021W DIP2Q12220 943 aaPredicted RBP9.52□□□□□ -0.89
RPB3YIL021W ISW2Q08773 1120 aa9.51□□□□□ -0.89
RPB3YIL021W RPG1P38249 964 aaKnown RBP9.44□□□□□ -0.9
RPB3YIL021W AVT3P36062 692 aa9.25□□□□□ -0.93
RPB3YIL021W YCK3P39962 524 aa9.23□□□□□ -0.93
RPB3YIL021W TSR3Q12094 313 aaKnown RBP9.16□□□□□ -0.94
RPB3YIL021W RSE1Q04693 1361 aaKnown RBP9.15□□□□□ -0.94
RPB3YIL021W BFR2Q06631 534 aaKnown RBP9.08□□□□□ -0.96
RPB3YIL021W HAA1Q12753 694 aaKnown RBP9.03□□□□□ -0.96
RPB3YIL021W RPL17AP05740 184 aaKnown RBP8.86□□□□□ -0.99
RPB3YIL021W RPL17BP46990 184 aaKnown RBP8.86□□□□□ -0.99
RPB3YIL021W REB1P21538 810 aa8.76□□□□□ -1.01
RPB3YIL021W MRPL32P25348 183 aa8.76□□□□□ -1.01
RPB3YIL021W SPT21P35209 758 aa8.55□□□□□ -1.04
RPB3YIL021W YKR023WP36119 530 aaKnown RBP8.43□□□□□ -1.06
RPB3YIL021W CDC27P38042 758 aa8.42□□□□□ -1.06
RPB3YIL021W YGL015CP33199 130 aa8.38□□□□□ -1.07
RPB3YIL021W RIM101P33400 625 aa8.26□□□□□ -1.09
RPB3YIL021W TFC8Q12308 588 aa8.24□□□□□ -1.09
RPB3YIL021W HOP09932 586 aa8.22□□□□□ -1.09
RPB3YIL021W DCD1P06773 312 aa8.18□□□□□ -1.1
RPB3YIL021W TFA1P36100 482 aa8.12□□□□□ -1.11
RPB3YIL021W MAP2P38174 421 aaKnown RBP8.12□□□□□ -1.11
RPB3YIL021W UBP10P53874 792 aaPredicted RBP8.11□□□□□ -1.11
RPB3YIL021W OXP1P28273 1286 aa8.01□□□□□ -1.13
RPB3YIL021W BCH2P36122 765 aa7.98□□□□□ -1.13
RPB3YIL021W SCY1P53009 804 aa7.96□□□□□ -1.14
RPB3YIL021W SLX5P32828 619 aaKnown RBP7.83□□□□□ -1.16
RPB3YIL021W YIL055CP40523 627 aaKnown RBP7.79□□□□□ -1.16
RPB3YIL021W PTP3P40048 928 aa7.78□□□□□ -1.16
RPB3YIL021W BUD31P25337 157 aaPredicted RBP7.77□□□□□ -1.17
RPB3YIL021W EPS1P40557 701 aa7.77□□□□□ -1.17
RPB3YIL021W TGL3P40308 642 aa7.76□□□□□ -1.17
RPB3YIL021W BDF1P35817 686 aa7.74□□□□□ -1.17
RPB3YIL021W TIF4632P39936 914 aaKnown RBP7.74□□□□□ -1.17
RPB3YIL021W RSM7P47150 247 aa7.72□□□□□ -1.17
RPB3YIL021W YAH1Q12184 172 aaKnown RBP7.71□□□□□ -1.18
RPB3YIL021W AI2P03876 854 aa7.65□□□□□ -1.18
RPB3YIL021W YLR271WQ06152 274 aa7.65□□□□□ -1.18
RPB3YIL021W BBC1P47068 1157 aa7.6□□□□□ -1.19
RPB3YIL021W SSP1P38871 571 aa7.54□□□□□ -1.2
RPB3YIL021W PSD2P53037 1138 aaKnown RBP7.53□□□□□ -1.2
RPB3YIL021W MST1P07236 462 aa7.49□□□□□ -1.21
RPB3YIL021W NSR1P27476 414 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21 RIP-Chip
RPB3YIL021W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
RPB3YIL021W UBP9P39967 754 aa7.43□□□□□ -1.22
RPB3YIL021W YOR238WQ08634 303 aa7.41□□□□□ -1.22
RPB3YIL021W YAP5P40574 245 aa7.38□□□□□ -1.23
RPB3YIL021W CST9Q06032 482 aa7.38□□□□□ -1.23
RPB3YIL021W MRM1P25270 412 aa7.37□□□□□ -1.23
RPB3YIL021W MGA2P40578 1113 aa7.35□□□□□ -1.23
RPB3YIL021W SIS1P25294 352 aaKnown RBP7.32□□□□□ -1.24
RPB3YIL021W YBL029C-AQ3E756 94 aa7.3□□□□□ -1.24
RPB3YIL021W VPS29P38759 282 aa7.25□□□□□ -1.25
RPB3YIL021W VNX1P42839 908 aa7.25□□□□□ -1.25
RPB3YIL021W PIB1Q06651 286 aa7.23□□□□□ -1.25
RPB3YIL021W RTG3P38165 486 aa7.21□□□□□ -1.26
RPB3YIL021W RCR1P38212 213 aa7.21□□□□□ -1.26
RPB3YIL021W WSC3Q12215 556 aa7.19□□□□□ -1.26
RPB3YIL021W YMR1P47147 688 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
RPB3YIL021W DBP1P24784 617 aaKnown RBP7.16□□□□□ -1.26
RPB3YIL021W STS1P38637 319 aa7.16□□□□□ -1.26
RPB3YIL021W GTT3P39996 337 aa7.16□□□□□ -1.26
RPB3YIL021W YFR006WP43590 535 aa7.14□□□□□ -1.27
RPB3YIL021W SPP1Q03012 353 aa7.14□□□□□ -1.27
RPB3YIL021W TIF11P38912 153 aaKnown RBP7.11□□□□□ -1.27
RPB3YIL021W VMA1P17255 1071 aaKnown RBP7.08□□□□□ -1.28
RPB3YIL021W YOL036WQ08206 761 aa7.05□□□□□ -1.28
RPB3YIL021W SAM3Q08986 587 aa7.05□□□□□ -1.28
RPB3YIL021W IOC2Q12072 812 aa7.05□□□□□ -1.28
RPB3YIL021W ULI1P43604 169 aa7.04□□□□□ -1.28
RPB3YIL021W MSB4Q12317 492 aa7.04□□□□□ -1.28
RPB3YIL021W RAM2P29703 316 aa7.03□□□□□ -1.28
RPB3YIL021W FKH1P40466 484 aa7.02□□□□□ -1.29
RPB3YIL021W SET4P42948 560 aa7.01□□□□□ -1.29
RPB3YIL021W AIR2Q12476 344 aaKnown RBP7.01□□□□□ -1.29
RPB3YIL021W LDB19Q12502 818 aa6.99□□□□□ -1.29
RPB3YIL021W EAP1P36041 632 aaKnown RBP6.97□□□□□ -1.29
RPB3YIL021W TRP5P00931 707 aaKnown RBP6.96□□□□□ -1.3
RPB3YIL021W MAK11P20484 414 aaKnown RBP6.95□□□□□ -1.3
RPB3YIL021W GYP5Q12344 894 aa6.92□□□□□ -1.3
RPB3YIL021W EDS1P38073 919 aa6.91□□□□□ -1.3
RPB3YIL021W RTG1P32607 177 aa6.9□□□□□ -1.3
RPB3YIL021W YNL035CP53962 389 aaKnown RBP6.88□□□□□ -1.31
RPB3YIL021W ABP1P15891 592 aaKnown RBP6.87□□□□□ -1.31
RPB3YIL021W COQ8P27697 501 aa6.86□□□□□ -1.31
RPB3YIL021W MIF2P35201 549 aa6.86□□□□□ -1.31
RPB3YIL021W DCW1P36091 449 aa6.86□□□□□ -1.31
RPB3YIL021W DAN4P47179 1161 aa6.86□□□□□ -1.31
RPB3YIL021W PTC3P34221 468 aaKnown RBP6.85□□□□□ -1.31
RPB3YIL021W SEC61P32915 480 aa6.84□□□□□ -1.31
RPB3YIL021W YJL171CP46992 396 aa6.84□□□□□ -1.31
RPB3YIL021W NCR1Q12200 1170 aa6.84□□□□□ -1.31
RPB3YIL021W HTA1P04911 132 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms