RNA–Protein interactions for RNA: YHR156C

LIN1, Transcript of Non-essential component of U5 snRNP, yeastyeast

Gene LIN1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIN1YHR156C MTC1P47018 478 aaKnown RBP14.92□□□□□ -0.02
LIN1YHR156C DRS1P32892 752 aaKnown RBP13.82□□□□□ -0.2
LIN1YHR156C FAP1P53971 965 aa13.33□□□□□ -0.28
LIN1YHR156C PRI1P10363 409 aa12.62□□□□□ -0.39
LIN1YHR156C PRY3P47033 881 aa12.58□□□□□ -0.4
LIN1YHR156C AAD16Q02895 342 aa12.5□□□□□ -0.41
LIN1YHR156C ISW2Q08773 1120 aa12.3□□□□□ -0.44
LIN1YHR156C RPG1P38249 964 aaKnown RBP12.21□□□□□ -0.45
LIN1YHR156C DIP2Q12220 943 aaPredicted RBP12.16□□□□□ -0.46
LIN1YHR156C YCK3P39962 524 aa12.09□□□□□ -0.47
LIN1YHR156C TSR3Q12094 313 aaKnown RBP11.88□□□□□ -0.51
LIN1YHR156C HAA1Q12753 694 aaKnown RBP11.84□□□□□ -0.51
LIN1YHR156C AVT3P36062 692 aa11.79□□□□□ -0.52
LIN1YHR156C RSE1Q04693 1361 aaKnown RBP11.76□□□□□ -0.53
LIN1YHR156C BFR2Q06631 534 aaKnown RBP11.46□□□□□ -0.57
LIN1YHR156C RPL17AP05740 184 aaKnown RBP11.39□□□□□ -0.59
LIN1YHR156C RPL17BP46990 184 aaKnown RBP11.39□□□□□ -0.59
LIN1YHR156C MRPL32P25348 183 aa11.37□□□□□ -0.59
LIN1YHR156C REB1P21538 810 aa11.28□□□□□ -0.6
LIN1YHR156C SPT21P35209 758 aa11.01□□□□□ -0.65
LIN1YHR156C YGL015CP33199 130 aa10.94□□□□□ -0.66
LIN1YHR156C CDC27P38042 758 aa10.9□□□□□ -0.66
LIN1YHR156C YKR023WP36119 530 aaKnown RBP10.88□□□□□ -0.67
LIN1YHR156C TFC8Q12308 588 aa10.63□□□□□ -0.71
LIN1YHR156C RIM101P33400 625 aa10.59□□□□□ -0.71
LIN1YHR156C HOP09932 586 aa10.58□□□□□ -0.72
LIN1YHR156C UBP10P53874 792 aaPredicted RBP10.57□□□□□ -0.72
LIN1YHR156C DCD1P06773 312 aa10.54□□□□□ -0.72
LIN1YHR156C MAP2P38174 421 aaKnown RBP10.53□□□□□ -0.72
LIN1YHR156C SCY1P53009 804 aa10.28□□□□□ -0.76
LIN1YHR156C BCH2P36122 765 aa10.27□□□□□ -0.77
LIN1YHR156C OXP1P28273 1286 aa10.25□□□□□ -0.77
LIN1YHR156C SLX5P32828 619 aaKnown RBP10.14□□□□□ -0.79
LIN1YHR156C TFA1P36100 482 aa10.12□□□□□ -0.79
LIN1YHR156C BUD31P25337 157 aaPredicted RBP10.1□□□□□ -0.79
LIN1YHR156C TGL3P40308 642 aa10.08□□□□□ -0.8
LIN1YHR156C TIF4632P39936 914 aaKnown RBP10.05□□□□□ -0.8
LIN1YHR156C EPS1P40557 701 aa10□□□□□ -0.81
LIN1YHR156C BDF1P35817 686 aa9.96□□□□□ -0.82
LIN1YHR156C YIL055CP40523 627 aaKnown RBP9.94□□□□□ -0.82
LIN1YHR156C PTP3P40048 928 aa9.93□□□□□ -0.82
LIN1YHR156C RSM7P47150 247 aa9.89□□□□□ -0.83
LIN1YHR156C YAH1Q12184 172 aaKnown RBP9.81□□□□□ -0.84
LIN1YHR156C AI2P03876 854 aa9.79□□□□□ -0.84
LIN1YHR156C YLR271WQ06152 274 aa9.75□□□□□ -0.85
LIN1YHR156C MST1P07236 462 aa9.73□□□□□ -0.85
LIN1YHR156C BBC1P47068 1157 aa9.73□□□□□ -0.85
LIN1YHR156C UBP9P39967 754 aa9.7□□□□□ -0.86
LIN1YHR156C NSR1P27476 414 aaKnown RBP RIP-Chip data9.69□□□□□ -0.86not detected
LIN1YHR156C PSD2P53037 1138 aaKnown RBP9.63□□□□□ -0.87
LIN1YHR156C YOR238WQ08634 303 aa9.6□□□□□ -0.87
LIN1YHR156C SSP1P38871 571 aa9.56□□□□□ -0.88
LIN1YHR156C SIS1P25294 352 aaKnown RBP9.52□□□□□ -0.89
LIN1YHR156C YAP5P40574 245 aa9.52□□□□□ -0.89
LIN1YHR156C YBL029C-AQ3E756 94 aa9.48□□□□□ -0.89
LIN1YHR156C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
LIN1YHR156C MRM1P25270 412 aa9.42□□□□□ -0.9
LIN1YHR156C VNX1P42839 908 aa9.41□□□□□ -0.9
LIN1YHR156C CST9Q06032 482 aa9.39□□□□□ -0.91
LIN1YHR156C MGA2P40578 1113 aa9.35□□□□□ -0.91
LIN1YHR156C WSC3Q12215 556 aa9.3□□□□□ -0.92
LIN1YHR156C VPS29P38759 282 aa9.29□□□□□ -0.92
LIN1YHR156C PIB1Q06651 286 aa9.28□□□□□ -0.92
LIN1YHR156C SPP1Q03012 353 aa9.26□□□□□ -0.93
LIN1YHR156C GTT3P39996 337 aa9.25□□□□□ -0.93
LIN1YHR156C TIF11P38912 153 aaKnown RBP9.23□□□□□ -0.93
LIN1YHR156C YMR1P47147 688 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
LIN1YHR156C RTG3P38165 486 aa9.21□□□□□ -0.94
LIN1YHR156C RCR1P38212 213 aa9.18□□□□□ -0.94
LIN1YHR156C STS1P38637 319 aa9.18□□□□□ -0.94
LIN1YHR156C DBP1P24784 617 aaKnown RBP9.17□□□□□ -0.94
LIN1YHR156C FKH1P40466 484 aa9.15□□□□□ -0.94
LIN1YHR156C IOC2Q12072 812 aa9.15□□□□□ -0.94
LIN1YHR156C AIR2Q12476 344 aaKnown RBP9.14□□□□□ -0.95
LIN1YHR156C YFR006WP43590 535 aa9.13□□□□□ -0.95
LIN1YHR156C MSB4Q12317 492 aa9.11□□□□□ -0.95
LIN1YHR156C VMA1P17255 1071 aaKnown RBP9.1□□□□□ -0.95
LIN1YHR156C ULI1P43604 169 aa9.1□□□□□ -0.95
LIN1YHR156C YOL036WQ08206 761 aa9.1□□□□□ -0.95
LIN1YHR156C SAM3Q08986 587 aa9.09□□□□□ -0.95
LIN1YHR156C LDB19Q12502 818 aa9.06□□□□□ -0.96
LIN1YHR156C SET4P42948 560 aa9.04□□□□□ -0.96
LIN1YHR156C EAP1P36041 632 aaKnown RBP9.02□□□□□ -0.97
LIN1YHR156C TRP5P00931 707 aaKnown RBP9□□□□□ -0.97
LIN1YHR156C RAM2P29703 316 aa8.93□□□□□ -0.98
LIN1YHR156C RTG1P32607 177 aa8.92□□□□□ -0.98
LIN1YHR156C YJL171CP46992 396 aa8.9□□□□□ -0.98
LIN1YHR156C YNL035CP53962 389 aaKnown RBP8.9□□□□□ -0.98
LIN1YHR156C GYP5Q12344 894 aa8.88□□□□□ -0.99
LIN1YHR156C ABP1P15891 592 aaKnown RBP8.86□□□□□ -0.99
LIN1YHR156C SEC61P32915 480 aa8.86□□□□□ -0.99
LIN1YHR156C DAN4P47179 1161 aa8.86□□□□□ -0.99
LIN1YHR156C BMT6Q12291 365 aa8.86□□□□□ -0.99
LIN1YHR156C MAK11P20484 414 aaKnown RBP8.85□□□□□ -0.99
LIN1YHR156C NCR1Q12200 1170 aa8.85□□□□□ -0.99
LIN1YHR156C EDS1P38073 919 aa8.82□□□□□ -1
LIN1YHR156C DCW1P36091 449 aa8.8□□□□□ -1
LIN1YHR156C JIP4Q03361 876 aa8.8□□□□□ -1
LIN1YHR156C HTA1P04911 132 aaKnown RBP8.79□□□□□ -1
LIN1YHR156C HTA2P04912 132 aa8.79□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms