RNA–Protein interactions for RNA: YHR153C

SPO16, Transcript of Meiosis-specific protein involved in synaptonemal complex assembly, yeastyeast

Gene SPO16, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO16YHR153C MTC1P47018 478 aaKnown RBP17.29■□□□□ 0.36
SPO16YHR153C FAP1P53971 965 aa17■□□□□ 0.31
SPO16YHR153C PRY3P47033 881 aa16.02■□□□□ 0.16
SPO16YHR153C DRS1P32892 752 aaKnown RBP15.44■□□□□ 0.06
SPO16YHR153C AAD16Q02895 342 aa15.32■□□□□ 0.04
SPO16YHR153C PRI1P10363 409 aa15.24■□□□□ 0.03
SPO16YHR153C YCK3P39962 524 aa15.05■□□□□ -0
SPO16YHR153C HAA1Q12753 694 aaKnown RBP14.92□□□□□ -0.02
SPO16YHR153C ISW2Q08773 1120 aa14.56□□□□□ -0.08
SPO16YHR153C RPG1P38249 964 aaKnown RBP14.46□□□□□ -0.09
SPO16YHR153C TSR3Q12094 313 aaKnown RBP14.37□□□□□ -0.11
SPO16YHR153C MRPL32P25348 183 aa13.8□□□□□ -0.2
SPO16YHR153C DIP2Q12220 943 aaPredicted RBP13.78□□□□□ -0.2
SPO16YHR153C YGL015CP33199 130 aa13.58□□□□□ -0.24
SPO16YHR153C RSE1Q04693 1361 aaKnown RBP13.51□□□□□ -0.25
SPO16YHR153C AVT3P36062 692 aa13.16□□□□□ -0.3
SPO16YHR153C RPL17AP05740 184 aaKnown RBP13.1□□□□□ -0.31
SPO16YHR153C REB1P21538 810 aa13.1□□□□□ -0.31
SPO16YHR153C RPL17BP46990 184 aaKnown RBP13.1□□□□□ -0.31
SPO16YHR153C BFR2Q06631 534 aaKnown RBP13.01□□□□□ -0.33
SPO16YHR153C BUD31P25337 157 aaPredicted RBP13□□□□□ -0.33
SPO16YHR153C CDC27P38042 758 aa12.87□□□□□ -0.35
SPO16YHR153C UBP10P53874 792 aaPredicted RBP12.65□□□□□ -0.38
SPO16YHR153C MAP2P38174 421 aaKnown RBP12.63□□□□□ -0.39
SPO16YHR153C SPT21P35209 758 aa12.57□□□□□ -0.4
SPO16YHR153C YKR023WP36119 530 aaKnown RBP12.55□□□□□ -0.4
SPO16YHR153C TFA1P36100 482 aa12.32□□□□□ -0.44
SPO16YHR153C HOP09932 586 aa12.3□□□□□ -0.44
SPO16YHR153C TFC8Q12308 588 aa12.3□□□□□ -0.44
SPO16YHR153C DCD1P06773 312 aa12.28□□□□□ -0.44
SPO16YHR153C SIS1P25294 352 aaKnown RBP12.28□□□□□ -0.44
SPO16YHR153C TIF4632P39936 914 aaKnown RBP12.16□□□□□ -0.46
SPO16YHR153C UBP9P39967 754 aa12.15□□□□□ -0.46
SPO16YHR153C SCY1P53009 804 aa12.15□□□□□ -0.46
SPO16YHR153C TGL3P40308 642 aa12.11□□□□□ -0.47
SPO16YHR153C SLX5P32828 619 aaKnown RBP12.05□□□□□ -0.48
SPO16YHR153C RIM101P33400 625 aa12□□□□□ -0.49
SPO16YHR153C BCH2P36122 765 aa11.85□□□□□ -0.51
SPO16YHR153C OXP1P28273 1286 aa11.55□□□□□ -0.56
SPO16YHR153C EPS1P40557 701 aa11.51□□□□□ -0.57
SPO16YHR153C YBL029C-AQ3E756 94 aa11.5□□□□□ -0.57
SPO16YHR153C BDF1P35817 686 aa11.49□□□□□ -0.57
SPO16YHR153C MST1P07236 462 aa11.44□□□□□ -0.58
SPO16YHR153C YOR238WQ08634 303 aa11.36□□□□□ -0.59
SPO16YHR153C PTP3P40048 928 aa11.32□□□□□ -0.6
SPO16YHR153C YIL055CP40523 627 aaKnown RBP11.32□□□□□ -0.6
SPO16YHR153C VNX1P42839 908 aa11.31□□□□□ -0.6
SPO16YHR153C NSR1P27476 414 aaKnown RBP RIP-Chip data11.3□□□□□ -0.6not detected
SPO16YHR153C SPP1Q03012 353 aa11.22□□□□□ -0.61
SPO16YHR153C RSM7P47150 247 aa11.21□□□□□ -0.61
SPO16YHR153C BBC1P47068 1157 aa11.19□□□□□ -0.62
SPO16YHR153C AI2P03876 854 aa11.14□□□□□ -0.63
SPO16YHR153C WSC3Q12215 556 aa11.14□□□□□ -0.63
SPO16YHR153C YAP5P40574 245 aa11.11□□□□□ -0.63
SPO16YHR153C AIR2Q12476 344 aaKnown RBP11.1□□□□□ -0.63
SPO16YHR153C YJL171CP46992 396 aa11.08□□□□□ -0.64
SPO16YHR153C FKH1P40466 484 aa11.02□□□□□ -0.65
SPO16YHR153C YAH1Q12184 172 aaKnown RBP11.02□□□□□ -0.65
SPO16YHR153C TIF11P38912 153 aaKnown RBP11□□□□□ -0.65
SPO16YHR153C GTT3P39996 337 aa10.91□□□□□ -0.66
SPO16YHR153C YLR271WQ06152 274 aa10.9□□□□□ -0.66
SPO16YHR153C LDB19Q12502 818 aa10.86□□□□□ -0.67
SPO16YHR153C PSD2P53037 1138 aaKnown RBP10.85□□□□□ -0.67
SPO16YHR153C BMT6Q12291 365 aa10.81□□□□□ -0.68
SPO16YHR153C ULI1P43604 169 aa10.8□□□□□ -0.68
SPO16YHR153C IOC2Q12072 812 aa10.77□□□□□ -0.69
SPO16YHR153C RQC2Q12532 1038 aaKnown RBP10.73□□□□□ -0.69
SPO16YHR153C PIB1Q06651 286 aa10.71□□□□□ -0.69
SPO16YHR153C MRM1P25270 412 aa10.68□□□□□ -0.7
SPO16YHR153C MSB4Q12317 492 aa10.65□□□□□ -0.7
SPO16YHR153C SSP1P38871 571 aa10.6□□□□□ -0.71
SPO16YHR153C EAP1P36041 632 aaKnown RBP10.58□□□□□ -0.72
SPO16YHR153C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.58□□□□□ -0.72not detected
SPO16YHR153C RTG1P32607 177 aa10.54□□□□□ -0.72
SPO16YHR153C VPS29P38759 282 aa10.52□□□□□ -0.73
SPO16YHR153C YMR1P47147 688 aaKnown RBP RIP-Chip data10.52□□□□□ -0.73not detected
SPO16YHR153C YOL036WQ08206 761 aa10.52□□□□□ -0.73
SPO16YHR153C NCR1Q12200 1170 aa10.51□□□□□ -0.73
SPO16YHR153C SET4P42948 560 aa10.48□□□□□ -0.73
SPO16YHR153C TRP5P00931 707 aaKnown RBP10.47□□□□□ -0.73
SPO16YHR153C DBP1P24784 617 aaKnown RBP10.47□□□□□ -0.73
SPO16YHR153C CST9Q06032 482 aa10.47□□□□□ -0.73
SPO16YHR153C RTG3P38165 486 aa10.44□□□□□ -0.74
SPO16YHR153C MGA2P40578 1113 aa10.43□□□□□ -0.74
SPO16YHR153C SAM3Q08986 587 aa10.43□□□□□ -0.74
SPO16YHR153C VMA1P17255 1071 aaKnown RBP10.42□□□□□ -0.74
SPO16YHR153C STS1P38637 319 aa10.41□□□□□ -0.74
SPO16YHR153C YNL035CP53962 389 aaKnown RBP10.4□□□□□ -0.74
SPO16YHR153C SEC61P32915 480 aa10.39□□□□□ -0.75
SPO16YHR153C YFR006WP43590 535 aa10.39□□□□□ -0.75
SPO16YHR153C TFG1P41895 735 aaPredicted RBP10.29□□□□□ -0.76
SPO16YHR153C RCR1P38212 213 aa10.28□□□□□ -0.76
SPO16YHR153C ABP1P15891 592 aaKnown RBP10.26□□□□□ -0.77
SPO16YHR153C BCK2P33306 851 aa10.26□□□□□ -0.77
SPO16YHR153C DAN4P47179 1161 aa10.25□□□□□ -0.77
SPO16YHR153C SAP30P38429 201 aa10.24□□□□□ -0.77
SPO16YHR153C JIP4Q03361 876 aa10.24□□□□□ -0.77
SPO16YHR153C GYP5Q12344 894 aa10.19□□□□□ -0.78
SPO16YHR153C CHL1P22516 861 aaPredicted RBP10.16□□□□□ -0.78
SPO16YHR153C HTA1P04911 132 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms