RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W MTC1P47018 478 aaKnown RBP15.47■□□□□ 0.07
CIC1YHR052W FAP1P53971 965 aa14.55□□□□□ -0.08
CIC1YHR052W DRS1P32892 752 aaKnown RBP13.98□□□□□ -0.17
CIC1YHR052W PRY3P47033 881 aa13.69□□□□□ -0.22
CIC1YHR052W PRI1P10363 409 aa13.33□□□□□ -0.28
CIC1YHR052W AAD16Q02895 342 aa13.31□□□□□ -0.28
CIC1YHR052W YCK3P39962 524 aa12.92□□□□□ -0.34
CIC1YHR052W ISW2Q08773 1120 aa12.92□□□□□ -0.34
CIC1YHR052W RPG1P38249 964 aaKnown RBP12.84□□□□□ -0.35
CIC1YHR052W HAA1Q12753 694 aaKnown RBP12.74□□□□□ -0.37
CIC1YHR052W TSR3Q12094 313 aaKnown RBP12.62□□□□□ -0.39
CIC1YHR052W DIP2Q12220 943 aaPredicted RBP12.42□□□□□ -0.42
CIC1YHR052W RSE1Q04693 1361 aaKnown RBP12.13□□□□□ -0.47
CIC1YHR052W MRPL32P25348 183 aa12.08□□□□□ -0.48
CIC1YHR052W RPL17AP05740 184 aaKnown RBP11.82□□□□□ -0.52
CIC1YHR052W AVT3P36062 692 aa11.82□□□□□ -0.52
CIC1YHR052W RPL17BP46990 184 aaKnown RBP11.82□□□□□ -0.52
CIC1YHR052W REB1P21538 810 aa11.8□□□□□ -0.52
CIC1YHR052W YGL015CP33199 130 aa11.7□□□□□ -0.54
CIC1YHR052W CDC27P38042 758 aa11.42□□□□□ -0.58
CIC1YHR052W BFR2Q06631 534 aaKnown RBP11.38□□□□□ -0.59
CIC1YHR052W YKR023WP36119 530 aaKnown RBP11.26□□□□□ -0.61
CIC1YHR052W SPT21P35209 758 aa11.23□□□□□ -0.61
CIC1YHR052W MAP2P38174 421 aaKnown RBP11.12□□□□□ -0.63
CIC1YHR052W UBP10P53874 792 aaPredicted RBP11.08□□□□□ -0.64
CIC1YHR052W HOP09932 586 aa11.06□□□□□ -0.64
CIC1YHR052W DCD1P06773 312 aa11.05□□□□□ -0.64
CIC1YHR052W TFC8Q12308 588 aa11.01□□□□□ -0.65
CIC1YHR052W BUD31P25337 157 aaPredicted RBP10.94□□□□□ -0.66
CIC1YHR052W SCY1P53009 804 aa10.81□□□□□ -0.68
CIC1YHR052W RIM101P33400 625 aa10.73□□□□□ -0.69
CIC1YHR052W SLX5P32828 619 aaKnown RBP10.67□□□□□ -0.7
CIC1YHR052W BCH2P36122 765 aa10.65□□□□□ -0.7
CIC1YHR052W TIF4632P39936 914 aaKnown RBP10.64□□□□□ -0.71
CIC1YHR052W TGL3P40308 642 aa10.6□□□□□ -0.71
CIC1YHR052W UBP9P39967 754 aa10.42□□□□□ -0.74
CIC1YHR052W SIS1P25294 352 aaKnown RBP10.4□□□□□ -0.74
CIC1YHR052W OXP1P28273 1286 aa10.39□□□□□ -0.75
CIC1YHR052W EPS1P40557 701 aa10.34□□□□□ -0.75
CIC1YHR052W BDF1P35817 686 aa10.31□□□□□ -0.76
CIC1YHR052W PTP3P40048 928 aa10.24□□□□□ -0.77
CIC1YHR052W YIL055CP40523 627 aaKnown RBP10.23□□□□□ -0.77
CIC1YHR052W MST1P07236 462 aa10.09□□□□□ -0.79
CIC1YHR052W RSM7P47150 247 aa10.07□□□□□ -0.8
CIC1YHR052W YBL029C-AQ3E756 94 aa10.07□□□□□ -0.8
CIC1YHR052W YOR238WQ08634 303 aa10.06□□□□□ -0.8
CIC1YHR052W YAH1Q12184 172 aaKnown RBP10.05□□□□□ -0.8
CIC1YHR052W BBC1P47068 1157 aa10.04□□□□□ -0.8
CIC1YHR052W AI2P03876 854 aa10.03□□□□□ -0.8
CIC1YHR052W NSR1P27476 414 aaKnown RBP RIP-Chip data9.94□□□□□ -0.82not detected
CIC1YHR052W VNX1P42839 908 aa9.92□□□□□ -0.82
CIC1YHR052W YAP5P40574 245 aa9.91□□□□□ -0.82
CIC1YHR052W WSC3Q12215 556 aa9.86□□□□□ -0.83
CIC1YHR052W SPP1Q03012 353 aa9.83□□□□□ -0.84
CIC1YHR052W YLR271WQ06152 274 aa9.82□□□□□ -0.84
CIC1YHR052W GTT3P39996 337 aa9.73□□□□□ -0.85
CIC1YHR052W PIB1Q06651 286 aa9.71□□□□□ -0.86
CIC1YHR052W TFA1P36100 482 aa9.7□□□□□ -0.86
CIC1YHR052W PSD2P53037 1138 aaKnown RBP9.7□□□□□ -0.86
CIC1YHR052W TIF11P38912 153 aaKnown RBP9.69□□□□□ -0.86
CIC1YHR052W MRM1P25270 412 aa9.65□□□□□ -0.86
CIC1YHR052W AIR2Q12476 344 aaKnown RBP9.64□□□□□ -0.87
CIC1YHR052W FKH1P40466 484 aa9.61□□□□□ -0.87
CIC1YHR052W YJL171CP46992 396 aa9.58□□□□□ -0.88
CIC1YHR052W ULI1P43604 169 aa9.56□□□□□ -0.88
CIC1YHR052W LDB19Q12502 818 aa9.56□□□□□ -0.88
CIC1YHR052W SSP1P38871 571 aa9.55□□□□□ -0.88
CIC1YHR052W IOC2Q12072 812 aa9.53□□□□□ -0.88
CIC1YHR052W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.51□□□□□ -0.89not detected
CIC1YHR052W CST9Q06032 482 aa9.47□□□□□ -0.89
CIC1YHR052W VPS29P38759 282 aa9.43□□□□□ -0.9
CIC1YHR052W SET4P42948 560 aa9.43□□□□□ -0.9
CIC1YHR052W YFR006WP43590 535 aa9.43□□□□□ -0.9
CIC1YHR052W MSB4Q12317 492 aa9.43□□□□□ -0.9
CIC1YHR052W DBP1P24784 617 aaKnown RBP9.42□□□□□ -0.9
CIC1YHR052W YMR1P47147 688 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
CIC1YHR052W YOL036WQ08206 761 aa9.41□□□□□ -0.9
CIC1YHR052W BMT6Q12291 365 aa9.41□□□□□ -0.9
CIC1YHR052W EAP1P36041 632 aaKnown RBP9.39□□□□□ -0.91
CIC1YHR052W RTG3P38165 486 aa9.37□□□□□ -0.91
CIC1YHR052W TRP5P00931 707 aaKnown RBP9.36□□□□□ -0.91
CIC1YHR052W RTG1P32607 177 aa9.35□□□□□ -0.91
CIC1YHR052W STS1P38637 319 aa9.35□□□□□ -0.91
CIC1YHR052W MGA2P40578 1113 aa9.35□□□□□ -0.91
CIC1YHR052W VMA1P17255 1071 aaKnown RBP9.33□□□□□ -0.92
CIC1YHR052W RCR1P38212 213 aa9.3□□□□□ -0.92
CIC1YHR052W NCR1Q12200 1170 aa9.29□□□□□ -0.92
CIC1YHR052W YNL035CP53962 389 aaKnown RBP9.25□□□□□ -0.93
CIC1YHR052W SAM3Q08986 587 aa9.25□□□□□ -0.93
CIC1YHR052W SEC61P32915 480 aa9.21□□□□□ -0.94
CIC1YHR052W GYP5Q12344 894 aa9.13□□□□□ -0.95
CIC1YHR052W TFG1P41895 735 aaPredicted RBP9.12□□□□□ -0.95
CIC1YHR052W DAN4P47179 1161 aa9.11□□□□□ -0.95
CIC1YHR052W DCW1P36091 449 aa9.1□□□□□ -0.95
CIC1YHR052W SAP30P38429 201 aa9.09□□□□□ -0.95
CIC1YHR052W JIP4Q03361 876 aa9.08□□□□□ -0.96
CIC1YHR052W HTA1P04911 132 aaKnown RBP9.06□□□□□ -0.96
CIC1YHR052W HTA2P04912 132 aa9.06□□□□□ -0.96
CIC1YHR052W ABP1P15891 592 aaKnown RBP9.05□□□□□ -0.96
CIC1YHR052W YDL129WQ07555 291 aa9.03□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms