RNA–Protein interactions for RNA: YHR038W

RRF1, Transcript of Mitochondrial ribosome recycling factor, yeastyeast

Gene RRF1, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRF1YHR038W MTC1P47018 478 aaKnown RBP17.55■□□□□ 0.4
RRF1YHR038W FAP1P53971 965 aa16.97■□□□□ 0.31
RRF1YHR038W PRY3P47033 881 aa15.99■□□□□ 0.15
RRF1YHR038W DRS1P32892 752 aaKnown RBP15.42■□□□□ 0.06
RRF1YHR038W AAD16Q02895 342 aa15.39■□□□□ 0.05
RRF1YHR038W PRI1P10363 409 aa15.36■□□□□ 0.05
RRF1YHR038W YCK3P39962 524 aa15.1■□□□□ 0.01
RRF1YHR038W HAA1Q12753 694 aaKnown RBP14.87□□□□□ -0.03
RRF1YHR038W ISW2Q08773 1120 aa14.74□□□□□ -0.05
RRF1YHR038W RPG1P38249 964 aaKnown RBP14.67□□□□□ -0.06
RRF1YHR038W TSR3Q12094 313 aaKnown RBP14.51□□□□□ -0.09
RRF1YHR038W MRPL32P25348 183 aa13.89□□□□□ -0.19
RRF1YHR038W DIP2Q12220 943 aaPredicted RBP13.87□□□□□ -0.19
RRF1YHR038W RSE1Q04693 1361 aaKnown RBP13.67□□□□□ -0.22
RRF1YHR038W YGL015CP33199 130 aa13.58□□□□□ -0.24
RRF1YHR038W REB1P21538 810 aa13.35□□□□□ -0.27
RRF1YHR038W RPL17AP05740 184 aaKnown RBP13.34□□□□□ -0.27
RRF1YHR038W RPL17BP46990 184 aaKnown RBP13.34□□□□□ -0.27
RRF1YHR038W AVT3P36062 692 aa13.08□□□□□ -0.32
RRF1YHR038W CDC27P38042 758 aa13.08□□□□□ -0.32
RRF1YHR038W BUD31P25337 157 aaPredicted RBP12.9□□□□□ -0.34
RRF1YHR038W YKR023WP36119 530 aaKnown RBP12.78□□□□□ -0.36
RRF1YHR038W MAP2P38174 421 aaKnown RBP12.77□□□□□ -0.37
RRF1YHR038W UBP10P53874 792 aaPredicted RBP12.75□□□□□ -0.37
RRF1YHR038W SPT21P35209 758 aa12.67□□□□□ -0.38
RRF1YHR038W DCD1P06773 312 aa12.55□□□□□ -0.4
RRF1YHR038W HOP09932 586 aa12.54□□□□□ -0.4
RRF1YHR038W TFC8Q12308 588 aa12.5□□□□□ -0.41
RRF1YHR038W SCY1P53009 804 aa12.33□□□□□ -0.44
RRF1YHR038W BFR2Q06631 534 aaKnown RBP12.33□□□□□ -0.44
RRF1YHR038W TIF4632P39936 914 aaKnown RBP12.23□□□□□ -0.45
RRF1YHR038W SIS1P25294 352 aaKnown RBP12.2□□□□□ -0.46
RRF1YHR038W SLX5P32828 619 aaKnown RBP12.2□□□□□ -0.46
RRF1YHR038W TGL3P40308 642 aa12.19□□□□□ -0.46
RRF1YHR038W UBP9P39967 754 aa12.11□□□□□ -0.47
RRF1YHR038W BCH2P36122 765 aa12.07□□□□□ -0.48
RRF1YHR038W RIM101P33400 625 aa11.99□□□□□ -0.49
RRF1YHR038W EPS1P40557 701 aa11.69□□□□□ -0.54
RRF1YHR038W BDF1P35817 686 aa11.67□□□□□ -0.54
RRF1YHR038W OXP1P28273 1286 aa11.6□□□□□ -0.55
RRF1YHR038W YBL029C-AQ3E756 94 aa11.6□□□□□ -0.55
RRF1YHR038W MST1P07236 462 aa11.56□□□□□ -0.56
RRF1YHR038W YOR238WQ08634 303 aa11.49□□□□□ -0.57
RRF1YHR038W PTP3P40048 928 aa11.45□□□□□ -0.58
RRF1YHR038W VNX1P42839 908 aa11.41□□□□□ -0.58
RRF1YHR038W YIL055CP40523 627 aaKnown RBP11.39□□□□□ -0.59
RRF1YHR038W NSR1P27476 414 aaKnown RBP RIP-Chip data11.33□□□□□ -0.6not detected
RRF1YHR038W SPP1Q03012 353 aa11.29□□□□□ -0.6
RRF1YHR038W WSC3Q12215 556 aa11.29□□□□□ -0.6
RRF1YHR038W YAP5P40574 245 aa11.27□□□□□ -0.61
RRF1YHR038W BBC1P47068 1157 aa11.26□□□□□ -0.61
RRF1YHR038W RSM7P47150 247 aa11.23□□□□□ -0.61
RRF1YHR038W AI2P03876 854 aa11.22□□□□□ -0.61
RRF1YHR038W AIR2Q12476 344 aaKnown RBP11.16□□□□□ -0.62
RRF1YHR038W YAH1Q12184 172 aaKnown RBP11.14□□□□□ -0.63
RRF1YHR038W TIF11P38912 153 aaKnown RBP11.11□□□□□ -0.63
RRF1YHR038W FKH1P40466 484 aa11.09□□□□□ -0.63
RRF1YHR038W YJL171CP46992 396 aa11.08□□□□□ -0.64
RRF1YHR038W GTT3P39996 337 aa11.06□□□□□ -0.64
RRF1YHR038W PIB1Q06651 286 aa10.97□□□□□ -0.65
RRF1YHR038W LDB19Q12502 818 aa10.97□□□□□ -0.65
RRF1YHR038W ULI1P43604 169 aa10.93□□□□□ -0.66
RRF1YHR038W IOC2Q12072 812 aa10.91□□□□□ -0.66
RRF1YHR038W YLR271WQ06152 274 aa10.89□□□□□ -0.67
RRF1YHR038W BMT6Q12291 365 aa10.86□□□□□ -0.67
RRF1YHR038W PSD2P53037 1138 aaKnown RBP10.81□□□□□ -0.68
RRF1YHR038W MRM1P25270 412 aa10.78□□□□□ -0.68
RRF1YHR038W MSB4Q12317 492 aa10.72□□□□□ -0.69
RRF1YHR038W RTG1P32607 177 aa10.68□□□□□ -0.7
RRF1YHR038W EAP1P36041 632 aaKnown RBP10.68□□□□□ -0.7
RRF1YHR038W SET4P42948 560 aa10.68□□□□□ -0.7
RRF1YHR038W YOL036WQ08206 761 aa10.67□□□□□ -0.7
RRF1YHR038W TRP5P00931 707 aaKnown RBP10.65□□□□□ -0.7
RRF1YHR038W NCR1Q12200 1170 aa10.62□□□□□ -0.71
RRF1YHR038W DBP1P24784 617 aaKnown RBP10.57□□□□□ -0.72
RRF1YHR038W YFR006WP43590 535 aa10.56□□□□□ -0.72
RRF1YHR038W YMR1P47147 688 aaKnown RBP RIP-Chip data10.56□□□□□ -0.72not detected
RRF1YHR038W VPS29P38759 282 aa10.55□□□□□ -0.72
RRF1YHR038W YNL035CP53962 389 aaKnown RBP10.55□□□□□ -0.72
RRF1YHR038W SEC61P32915 480 aa10.51□□□□□ -0.73
RRF1YHR038W VMA1P17255 1071 aaKnown RBP10.5□□□□□ -0.73
RRF1YHR038W STS1P38637 319 aa10.48□□□□□ -0.73
RRF1YHR038W TFA1P36100 482 aa10.47□□□□□ -0.73
RRF1YHR038W CST9Q06032 482 aa10.47□□□□□ -0.73
RRF1YHR038W SSP1P38871 571 aa10.46□□□□□ -0.73
RRF1YHR038W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.46□□□□□ -0.73not detected
RRF1YHR038W RTG3P38165 486 aa10.45□□□□□ -0.74
RRF1YHR038W SAM3Q08986 587 aa10.43□□□□□ -0.74
RRF1YHR038W SAP30P38429 201 aa10.38□□□□□ -0.75
RRF1YHR038W TFG1P41895 735 aaPredicted RBP10.38□□□□□ -0.75
RRF1YHR038W DAN4P47179 1161 aa10.35□□□□□ -0.75
RRF1YHR038W RCR1P38212 213 aa10.34□□□□□ -0.75
RRF1YHR038W MGA2P40578 1113 aa10.31□□□□□ -0.76
RRF1YHR038W BCK2P33306 851 aa10.29□□□□□ -0.76
RRF1YHR038W JIP4Q03361 876 aa10.29□□□□□ -0.76
RRF1YHR038W YDL129WQ07555 291 aa10.27□□□□□ -0.77
RRF1YHR038W GYP5Q12344 894 aa10.27□□□□□ -0.77
RRF1YHR038W CHL1P22516 861 aaPredicted RBP10.25□□□□□ -0.77
RRF1YHR038W DCW1P36091 449 aa10.23□□□□□ -0.77
RRF1YHR038W HTA1P04911 132 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms