RNA–Protein interactions for RNA: YHL009W-B

YHL009W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHL009W-B, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-BYHL009W-B FAP1P53971 965 aa1.63□□□□□ -2.15
YHL009W-BYHL009W-B PRY3P47033 881 aa1.61□□□□□ -2.15
YHL009W-BYHL009W-B YCK3P39962 524 aa1.12□□□□□ -2.23
YHL009W-BYHL009W-B SIS1P25294 352 aaKnown RBP0.81□□□□□ -2.28
YHL009W-BYHL009W-B MDN1Q12019 4910 aaKnown RBP0.79□□□□□ -2.28
YHL009W-BYHL009W-B DYN1P36022 4092 aa0.73□□□□□ -2.29
YHL009W-BYHL009W-B TSR3Q12094 313 aaKnown RBP0.73□□□□□ -2.29
YHL009W-BYHL009W-B BUD31P25337 157 aaPredicted RBP0.71□□□□□ -2.3
YHL009W-BYHL009W-B HAA1Q12753 694 aaKnown RBP0.7□□□□□ -2.3
YHL009W-BYHL009W-B AAD16Q02895 342 aa0.62□□□□□ -2.31
YHL009W-BYHL009W-B TRA1P38811 3744 aa0.62□□□□□ -2.31
YHL009W-BYHL009W-B RGA2Q06407 1009 aa0.6□□□□□ -2.31
YHL009W-BYHL009W-B DCD1P06773 312 aa0.57□□□□□ -2.32
YHL009W-BYHL009W-B YBL029C-AQ3E756 94 aa0.51□□□□□ -2.33
YHL009W-BYHL009W-B MAP2P38174 421 aaKnown RBP0.51□□□□□ -2.33
YHL009W-BYHL009W-B UBP9P39967 754 aa0.5□□□□□ -2.33
YHL009W-BYHL009W-B WSC3Q12215 556 aa0.5□□□□□ -2.33
YHL009W-BYHL009W-B YGL015CP33199 130 aa0.49□□□□□ -2.33
YHL009W-BYHL009W-B MRPL32P25348 183 aa0.48□□□□□ -2.33
YHL009W-BYHL009W-B PRI1P10363 409 aa0.48□□□□□ -2.33
YHL009W-BYHL009W-B CDC27P38042 758 aa0.47□□□□□ -2.33
YHL009W-BYHL009W-B RPG1P38249 964 aaKnown RBP0.46□□□□□ -2.34
YHL009W-BYHL009W-B RGA1P39083 1007 aa0.45□□□□□ -2.34
YHL009W-BYHL009W-B PIB1Q06651 286 aa0.45□□□□□ -2.34
YHL009W-BYHL009W-B GBP2P25555 427 aaKnown RBP RIP-Chip data0.43□□□□□ -2.34not detected
YHL009W-BYHL009W-B HOP09932 586 aa0.43□□□□□ -2.34
YHL009W-BYHL009W-B SCY1P53009 804 aa0.43□□□□□ -2.34
YHL009W-BYHL009W-B YJL171CP46992 396 aa0.42□□□□□ -2.34
YHL009W-BYHL009W-B YAH1Q12184 172 aaKnown RBP0.41□□□□□ -2.34
YHL009W-BYHL009W-B SNF2P22082 1703 aa0.38□□□□□ -2.35
YHL009W-BYHL009W-B YDR344CQ05510 147 aa0.35□□□□□ -2.35
YHL009W-BYHL009W-B PTP3P40048 928 aa0.35□□□□□ -2.35
YHL009W-BYHL009W-B SPP1Q03012 353 aa0.35□□□□□ -2.35
YHL009W-BYHL009W-B TOM1Q03280 3268 aa0.33□□□□□ -2.36
YHL009W-BYHL009W-B AVT3P36062 692 aa0.33□□□□□ -2.36
YHL009W-BYHL009W-B AIR2Q12476 344 aaKnown RBP0.31□□□□□ -2.36
YHL009W-BYHL009W-B LDB19Q12502 818 aa0.3□□□□□ -2.36
YHL009W-BYHL009W-B SLX5P32828 619 aaKnown RBP0.29□□□□□ -2.36
YHL009W-BYHL009W-B TYW1Q08960 810 aaKnown RBP0.28□□□□□ -2.36
YHL009W-BYHL009W-B GAR1P28007 205 aaKnown RBP0.28□□□□□ -2.36
YHL009W-BYHL009W-B SAP30P38429 201 aa0.27□□□□□ -2.37
YHL009W-BYHL009W-B VNX1P42839 908 aa0.27□□□□□ -2.37
YHL009W-BYHL009W-B MTC5Q03897 1148 aa0.26□□□□□ -2.37
YHL009W-BYHL009W-B BMT6Q12291 365 aa0.26□□□□□ -2.37
YHL009W-BYHL009W-B REB1P21538 810 aa0.26□□□□□ -2.37
YHL009W-BYHL009W-B SET4P42948 560 aa0.25□□□□□ -2.37
YHL009W-BYHL009W-B ISW2Q08773 1120 aa0.24□□□□□ -2.37
YHL009W-BYHL009W-B NCR1Q12200 1170 aa0.24□□□□□ -2.37
YHL009W-BYHL009W-B TIF4632P39936 914 aaKnown RBP0.24□□□□□ -2.37
YHL009W-BYHL009W-B ULI1P43604 169 aa0.23□□□□□ -2.37
YHL009W-BYHL009W-B GTT3P39996 337 aa0.23□□□□□ -2.37
YHL009W-BYHL009W-B FKH1P40466 484 aa0.23□□□□□ -2.37
YHL009W-BYHL009W-B YPL062WQ02781 134 aa0.23□□□□□ -2.37
YHL009W-BYHL009W-B DPS1P04802 557 aaKnown RBP0.22□□□□□ -2.37
YHL009W-BYHL009W-B RPL17AP05740 184 aaKnown RBP0.22□□□□□ -2.37
YHL009W-BYHL009W-B RPL17BP46990 184 aaKnown RBP0.22□□□□□ -2.37
YHL009W-BYHL009W-B PSH1Q12161 406 aa0.22□□□□□ -2.37
YHL009W-BYHL009W-B BCH2P36122 765 aa0.21□□□□□ -2.38
YHL009W-BYHL009W-B VRP1P37370 817 aa0.21□□□□□ -2.38
YHL009W-BYHL009W-B RAS1P01119 309 aa0.21□□□□□ -2.38
YHL009W-BYHL009W-B PEX29Q03370 554 aa0.21□□□□□ -2.38
YHL009W-BYHL009W-B SRC1Q03707 834 aa0.2□□□□□ -2.38
YHL009W-BYHL009W-B YFR006WP43590 535 aa0.19□□□□□ -2.38
YHL009W-BYHL009W-B BCK2P33306 851 aa0.19□□□□□ -2.38
YHL009W-BYHL009W-B YKR023WP36119 530 aaKnown RBP0.19□□□□□ -2.38
YHL009W-BYHL009W-B GIS1Q03833 894 aa0.19□□□□□ -2.38
YHL009W-BYHL009W-B YBR056W-AI2HB52 66 aa0.19□□□□□ -2.38
YHL009W-BYHL009W-B MTC1P47018 478 aaKnown RBP0.19□□□□□ -2.38
YHL009W-BYHL009W-B OXP1P28273 1286 aa0.18□□□□□ -2.38
YHL009W-BYHL009W-B IRA2P19158 3079 aa0.17□□□□□ -2.38
YHL009W-BYHL009W-B RTG1P32607 177 aa0.17□□□□□ -2.38
YHL009W-BYHL009W-B SLX1P38324 304 aa0.16□□□□□ -2.38
YHL009W-BYHL009W-B UBP10P53874 792 aaPredicted RBP0.16□□□□□ -2.38
YHL009W-BYHL009W-B TIF11P38912 153 aaKnown RBP0.16□□□□□ -2.38
YHL009W-BYHL009W-B NFS1P25374 497 aa0.16□□□□□ -2.38
YHL009W-BYHL009W-B YIL055CP40523 627 aaKnown RBP0.16□□□□□ -2.38
YHL009W-BYHL009W-B NRD1P53617 575 aaKnown RBP RIP-Chip data0.16□□□□□ -2.38not detected
YHL009W-BYHL009W-B VPS13Q07878 3144 aa0.15□□□□□ -2.38
YHL009W-BYHL009W-B KTR7P40504 517 aa0.15□□□□□ -2.38
YHL009W-BYHL009W-B YOR238WQ08634 303 aa0.15□□□□□ -2.38
YHL009W-BYHL009W-B TFC8Q12308 588 aa0.15□□□□□ -2.39
YHL009W-BYHL009W-B TFG1P41895 735 aaPredicted RBP0.14□□□□□ -2.39
YHL009W-BYHL009W-B MIF2P35201 549 aa0.14□□□□□ -2.39
YHL009W-BYHL009W-B BDF1P35817 686 aa0.13□□□□□ -2.39
YHL009W-BYHL009W-B MID1P41821 548 aa0.13□□□□□ -2.39
YHL009W-BYHL009W-B TRP5P00931 707 aaKnown RBP0.13□□□□□ -2.39
YHL009W-BYHL009W-B ELP4Q02884 456 aaKnown RBP0.13□□□□□ -2.39
YHL009W-BYHL009W-B TGL3P40308 642 aa0.12□□□□□ -2.39
YHL009W-BYHL009W-B XDJ1P39102 459 aa0.12□□□□□ -2.39
YHL009W-BYHL009W-B AIR1P40507 360 aaKnown RBP0.12□□□□□ -2.39
YHL009W-BYHL009W-B CLA4P48562 842 aa0.12□□□□□ -2.39
YHL009W-BYHL009W-B IOC2Q12072 812 aa0.11□□□□□ -2.39
YHL009W-BYHL009W-B EPS1P40557 701 aa0.11□□□□□ -2.39
YHL009W-BYHL009W-B IRC24P40580 263 aa0.11□□□□□ -2.39
YHL009W-BYHL009W-B IRA1P18963 3092 aa0.1□□□□□ -2.39
YHL009W-BYHL009W-B GCR2Q01722 534 aa0.1□□□□□ -2.39
YHL009W-BYHL009W-B DCW1P36091 449 aa0.1□□□□□ -2.39
YHL009W-BYHL009W-B RPO21P04050 1733 aaKnown RBP0.1□□□□□ -2.39
YHL009W-BYHL009W-B ITT1Q04638 464 aa0.1□□□□□ -2.39
YHL009W-BYHL009W-B FRK1Q03002 865 aaPredicted RBP0.09□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms