RNA–Protein interactions for RNA: YHL004W

MRP4, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene MRP4, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRP4YHL004W MTC1P47018 478 aaKnown RBP14.57□□□□□ -0.08
MRP4YHL004W DRS1P32892 752 aaKnown RBP13.54□□□□□ -0.24
MRP4YHL004W FAP1P53971 965 aa13.23□□□□□ -0.29
MRP4YHL004W PRY3P47033 881 aa12.45□□□□□ -0.42
MRP4YHL004W PRI1P10363 409 aa12.34□□□□□ -0.43
MRP4YHL004W AAD16Q02895 342 aa12.27□□□□□ -0.45
MRP4YHL004W ISW2Q08773 1120 aa12.06□□□□□ -0.48
MRP4YHL004W RPG1P38249 964 aaKnown RBP12□□□□□ -0.49
MRP4YHL004W DIP2Q12220 943 aaPredicted RBP11.9□□□□□ -0.5
MRP4YHL004W YCK3P39962 524 aa11.8□□□□□ -0.52
MRP4YHL004W TSR3Q12094 313 aaKnown RBP11.7□□□□□ -0.54
MRP4YHL004W HAA1Q12753 694 aaKnown RBP11.63□□□□□ -0.55
MRP4YHL004W RSE1Q04693 1361 aaKnown RBP11.51□□□□□ -0.57
MRP4YHL004W AVT3P36062 692 aa11.44□□□□□ -0.58
MRP4YHL004W BFR2Q06631 534 aaKnown RBP11.2□□□□□ -0.62
MRP4YHL004W MRPL32P25348 183 aa11.19□□□□□ -0.62
MRP4YHL004W RPL17AP05740 184 aaKnown RBP11.18□□□□□ -0.62
MRP4YHL004W RPL17BP46990 184 aaKnown RBP11.18□□□□□ -0.62
MRP4YHL004W REB1P21538 810 aa11.11□□□□□ -0.63
MRP4YHL004W YGL015CP33199 130 aa10.74□□□□□ -0.69
MRP4YHL004W SPT21P35209 758 aa10.68□□□□□ -0.7
MRP4YHL004W CDC27P38042 758 aa10.67□□□□□ -0.7
MRP4YHL004W YKR023WP36119 530 aaKnown RBP10.61□□□□□ -0.71
MRP4YHL004W HOP09932 586 aa10.41□□□□□ -0.74
MRP4YHL004W DCD1P06773 312 aa10.39□□□□□ -0.75
MRP4YHL004W TFC8Q12308 588 aa10.38□□□□□ -0.75
MRP4YHL004W MAP2P38174 421 aaKnown RBP10.33□□□□□ -0.76
MRP4YHL004W RIM101P33400 625 aa10.28□□□□□ -0.76
MRP4YHL004W UBP10P53874 792 aaPredicted RBP10.28□□□□□ -0.76
MRP4YHL004W SCY1P53009 804 aa10.1□□□□□ -0.79
MRP4YHL004W BCH2P36122 765 aa10.05□□□□□ -0.8
MRP4YHL004W OXP1P28273 1286 aa9.97□□□□□ -0.81
MRP4YHL004W SLX5P32828 619 aaKnown RBP9.94□□□□□ -0.82
MRP4YHL004W BUD31P25337 157 aaPredicted RBP9.89□□□□□ -0.83
MRP4YHL004W TIF4632P39936 914 aaKnown RBP9.87□□□□□ -0.83
MRP4YHL004W TGL3P40308 642 aa9.84□□□□□ -0.83
MRP4YHL004W PTP3P40048 928 aa9.79□□□□□ -0.84
MRP4YHL004W YIL055CP40523 627 aaKnown RBP9.78□□□□□ -0.84
MRP4YHL004W EPS1P40557 701 aa9.77□□□□□ -0.85
MRP4YHL004W TFA1P36100 482 aa9.76□□□□□ -0.85
MRP4YHL004W BDF1P35817 686 aa9.74□□□□□ -0.85
MRP4YHL004W YAH1Q12184 172 aaKnown RBP9.67□□□□□ -0.86
MRP4YHL004W RSM7P47150 247 aa9.65□□□□□ -0.86
MRP4YHL004W AI2P03876 854 aa9.57□□□□□ -0.88
MRP4YHL004W BBC1P47068 1157 aa9.55□□□□□ -0.88
MRP4YHL004W UBP9P39967 754 aa9.54□□□□□ -0.88
MRP4YHL004W YLR271WQ06152 274 aa9.49□□□□□ -0.89
MRP4YHL004W MST1P07236 462 aa9.42□□□□□ -0.9
MRP4YHL004W SIS1P25294 352 aaKnown RBP9.42□□□□□ -0.9
MRP4YHL004W YOR238WQ08634 303 aa9.39□□□□□ -0.91
MRP4YHL004W NSR1P27476 414 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91 RIP-Chip
MRP4YHL004W PSD2P53037 1138 aaKnown RBP9.34□□□□□ -0.91
MRP4YHL004W SSP1P38871 571 aa9.32□□□□□ -0.92
MRP4YHL004W YBL029C-AQ3E756 94 aa9.32□□□□□ -0.92
MRP4YHL004W YAP5P40574 245 aa9.31□□□□□ -0.92
MRP4YHL004W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.24□□□□□ -0.93not detected
MRP4YHL004W MRM1P25270 412 aa9.23□□□□□ -0.93
MRP4YHL004W VNX1P42839 908 aa9.2□□□□□ -0.94
MRP4YHL004W WSC3Q12215 556 aa9.18□□□□□ -0.94
MRP4YHL004W CST9Q06032 482 aa9.17□□□□□ -0.94
MRP4YHL004W PIB1Q06651 286 aa9.15□□□□□ -0.94
MRP4YHL004W SPP1Q03012 353 aa9.11□□□□□ -0.95
MRP4YHL004W GTT3P39996 337 aa9.1□□□□□ -0.95
MRP4YHL004W MGA2P40578 1113 aa9.09□□□□□ -0.95
MRP4YHL004W VPS29P38759 282 aa9.04□□□□□ -0.96
MRP4YHL004W TIF11P38912 153 aaKnown RBP9.02□□□□□ -0.97
MRP4YHL004W RTG3P38165 486 aa9□□□□□ -0.97
MRP4YHL004W DBP1P24784 617 aaKnown RBP8.98□□□□□ -0.97
MRP4YHL004W YFR006WP43590 535 aa8.98□□□□□ -0.97
MRP4YHL004W YMR1P47147 688 aaKnown RBP RIP-Chip data8.98□□□□□ -0.97not detected
MRP4YHL004W RCR1P38212 213 aa8.97□□□□□ -0.97
MRP4YHL004W STS1P38637 319 aa8.94□□□□□ -0.98
MRP4YHL004W ULI1P43604 169 aa8.93□□□□□ -0.98
MRP4YHL004W AIR2Q12476 344 aaKnown RBP8.91□□□□□ -0.98
MRP4YHL004W IOC2Q12072 812 aa8.9□□□□□ -0.98
MRP4YHL004W FKH1P40466 484 aa8.89□□□□□ -0.99
MRP4YHL004W LDB19Q12502 818 aa8.89□□□□□ -0.99
MRP4YHL004W SET4P42948 560 aa8.88□□□□□ -0.99
MRP4YHL004W YOL036WQ08206 761 aa8.87□□□□□ -0.99
MRP4YHL004W VMA1P17255 1071 aaKnown RBP8.86□□□□□ -0.99
MRP4YHL004W MSB4Q12317 492 aa8.86□□□□□ -0.99
MRP4YHL004W TRP5P00931 707 aaKnown RBP8.8□□□□□ -1
MRP4YHL004W EAP1P36041 632 aaKnown RBP8.8□□□□□ -1
MRP4YHL004W YJL171CP46992 396 aa8.8□□□□□ -1
MRP4YHL004W SAM3Q08986 587 aa8.79□□□□□ -1
MRP4YHL004W RTG1P32607 177 aa8.73□□□□□ -1.01
MRP4YHL004W BMT6Q12291 365 aa8.69□□□□□ -1.02
MRP4YHL004W GYP5Q12344 894 aa8.69□□□□□ -1.02
MRP4YHL004W NCR1Q12200 1170 aa8.68□□□□□ -1.02
MRP4YHL004W YNL035CP53962 389 aaKnown RBP8.67□□□□□ -1.02
MRP4YHL004W RAM2P29703 316 aa8.66□□□□□ -1.02
MRP4YHL004W DCW1P36091 449 aa8.64□□□□□ -1.03
MRP4YHL004W SEC61P32915 480 aa8.63□□□□□ -1.03
MRP4YHL004W DAN4P47179 1161 aa8.6□□□□□ -1.03
MRP4YHL004W HTA1P04911 132 aaKnown RBP8.59□□□□□ -1.03
MRP4YHL004W HTA2P04912 132 aa8.59□□□□□ -1.03
MRP4YHL004W MAK11P20484 414 aaKnown RBP8.59□□□□□ -1.03
MRP4YHL004W MIF2P35201 549 aa8.59□□□□□ -1.03
MRP4YHL004W ABP1P15891 592 aaKnown RBP8.58□□□□□ -1.04
MRP4YHL004W EDS1P38073 919 aa8.57□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms