RNA–Protein interactions for RNA: YHL002W

HSE1, Transcript of Subunit of the endosomal Vps27p-Hse1p complex, yeastyeast

Gene HSE1, Length 1,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSE1YHL002W MTC1P47018 478 aaKnown RBP16.11■□□□□ 0.17
HSE1YHL002W FAP1P53971 965 aa16.07■□□□□ 0.16
HSE1YHL002W DRS1P32892 752 aaKnown RBP15.2■□□□□ 0.02
HSE1YHL002W PRY3P47033 881 aa15.15■□□□□ 0.02
HSE1YHL002W AAD16Q02895 342 aa14.42□□□□□ -0.1
HSE1YHL002W PRI1P10363 409 aa14.34□□□□□ -0.11
HSE1YHL002W YCK3P39962 524 aa14.24□□□□□ -0.13
HSE1YHL002W HAA1Q12753 694 aaKnown RBP14.09□□□□□ -0.15
HSE1YHL002W ISW2Q08773 1120 aa13.64□□□□□ -0.23
HSE1YHL002W RPG1P38249 964 aaKnown RBP13.58□□□□□ -0.24
HSE1YHL002W TSR3Q12094 313 aaKnown RBP13.52□□□□□ -0.25
HSE1YHL002W DIP2Q12220 943 aaPredicted RBP13.11□□□□□ -0.31
HSE1YHL002W MRPL32P25348 183 aa12.97□□□□□ -0.33
HSE1YHL002W BFR2Q06631 534 aaKnown RBP12.93□□□□□ -0.34
HSE1YHL002W YGL015CP33199 130 aa12.79□□□□□ -0.36
HSE1YHL002W AVT3P36062 692 aa12.77□□□□□ -0.37
HSE1YHL002W RSE1Q04693 1361 aaKnown RBP12.51□□□□□ -0.41
HSE1YHL002W BUD31P25337 157 aaPredicted RBP12.31□□□□□ -0.44
HSE1YHL002W REB1P21538 810 aa12.25□□□□□ -0.45
HSE1YHL002W RPL17AP05740 184 aaKnown RBP12.18□□□□□ -0.46
HSE1YHL002W RPL17BP46990 184 aaKnown RBP12.18□□□□□ -0.46
HSE1YHL002W CDC27P38042 758 aa12.09□□□□□ -0.47
HSE1YHL002W MAP2P38174 421 aaKnown RBP11.87□□□□□ -0.51
HSE1YHL002W UBP10P53874 792 aaPredicted RBP11.87□□□□□ -0.51
HSE1YHL002W TFA1P36100 482 aa11.79□□□□□ -0.52
HSE1YHL002W YKR023WP36119 530 aaKnown RBP11.72□□□□□ -0.53
HSE1YHL002W SIS1P25294 352 aaKnown RBP11.62□□□□□ -0.55
HSE1YHL002W SPT21P35209 758 aa11.54□□□□□ -0.56
HSE1YHL002W DCD1P06773 312 aa11.53□□□□□ -0.56
HSE1YHL002W HOP09932 586 aa11.52□□□□□ -0.57
HSE1YHL002W TFC8Q12308 588 aa11.47□□□□□ -0.57
HSE1YHL002W UBP9P39967 754 aa11.44□□□□□ -0.58
HSE1YHL002W TIF4632P39936 914 aaKnown RBP11.41□□□□□ -0.58
HSE1YHL002W SCY1P53009 804 aa11.39□□□□□ -0.59
HSE1YHL002W TGL3P40308 642 aa11.38□□□□□ -0.59
HSE1YHL002W SLX5P32828 619 aaKnown RBP11.3□□□□□ -0.6
HSE1YHL002W RIM101P33400 625 aa11.3□□□□□ -0.6
HSE1YHL002W BCH2P36122 765 aa11.05□□□□□ -0.64
HSE1YHL002W OXP1P28273 1286 aa10.93□□□□□ -0.66
HSE1YHL002W YIL055CP40523 627 aaKnown RBP10.85□□□□□ -0.67
HSE1YHL002W YBL029C-AQ3E756 94 aa10.82□□□□□ -0.68
HSE1YHL002W PTP3P40048 928 aa10.78□□□□□ -0.68
HSE1YHL002W YAH1Q12184 172 aaKnown RBP10.74□□□□□ -0.69
HSE1YHL002W MST1P07236 462 aa10.72□□□□□ -0.69
HSE1YHL002W EPS1P40557 701 aa10.68□□□□□ -0.7
HSE1YHL002W BDF1P35817 686 aa10.67□□□□□ -0.7
HSE1YHL002W RSM7P47150 247 aa10.65□□□□□ -0.71
HSE1YHL002W YOR238WQ08634 303 aa10.65□□□□□ -0.71
HSE1YHL002W VNX1P42839 908 aa10.63□□□□□ -0.71
HSE1YHL002W SSP1P38871 571 aa10.6□□□□□ -0.71
HSE1YHL002W YLR271WQ06152 274 aa10.55□□□□□ -0.72
HSE1YHL002W SPP1Q03012 353 aa10.52□□□□□ -0.72
HSE1YHL002W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.51□□□□□ -0.73not detected
HSE1YHL002W AI2P03876 854 aa10.5□□□□□ -0.73
HSE1YHL002W BBC1P47068 1157 aa10.49□□□□□ -0.73
HSE1YHL002W WSC3Q12215 556 aa10.47□□□□□ -0.73
HSE1YHL002W NSR1P27476 414 aaKnown RBP RIP-Chip data10.44□□□□□ -0.74not detected
HSE1YHL002W AIR2Q12476 344 aaKnown RBP10.44□□□□□ -0.74
HSE1YHL002W YJL171CP46992 396 aa10.43□□□□□ -0.74
HSE1YHL002W YAP5P40574 245 aa10.38□□□□□ -0.75
HSE1YHL002W FKH1P40466 484 aa10.36□□□□□ -0.75
HSE1YHL002W TIF11P38912 153 aaKnown RBP10.32□□□□□ -0.76
HSE1YHL002W PSD2P53037 1138 aaKnown RBP10.3□□□□□ -0.76
HSE1YHL002W MGA2P40578 1113 aa10.27□□□□□ -0.76
HSE1YHL002W GTT3P39996 337 aa10.21□□□□□ -0.78
HSE1YHL002W CST9Q06032 482 aa10.2□□□□□ -0.78
HSE1YHL002W LDB19Q12502 818 aa10.19□□□□□ -0.78
HSE1YHL002W BMT6Q12291 365 aa10.16□□□□□ -0.78
HSE1YHL002W MRM1P25270 412 aa10.14□□□□□ -0.79
HSE1YHL002W ULI1P43604 169 aa10.13□□□□□ -0.79
HSE1YHL002W IOC2Q12072 812 aa10.11□□□□□ -0.79
HSE1YHL002W PIB1Q06651 286 aa10.02□□□□□ -0.8
HSE1YHL002W RTG3P38165 486 aa10□□□□□ -0.81
HSE1YHL002W VPS29P38759 282 aa9.89□□□□□ -0.83
HSE1YHL002W RTG1P32607 177 aa9.88□□□□□ -0.83
HSE1YHL002W RCR1P38212 213 aa9.88□□□□□ -0.83
HSE1YHL002W MSB4Q12317 492 aa9.88□□□□□ -0.83
HSE1YHL002W EAP1P36041 632 aaKnown RBP9.87□□□□□ -0.83
HSE1YHL002W YMR1P47147 688 aaKnown RBP RIP-Chip data9.87□□□□□ -0.83not detected
HSE1YHL002W NCR1Q12200 1170 aa9.85□□□□□ -0.83
HSE1YHL002W TRP5P00931 707 aaKnown RBP9.81□□□□□ -0.84
HSE1YHL002W DBP1P24784 617 aaKnown RBP9.8□□□□□ -0.84
HSE1YHL002W SET4P42948 560 aa9.8□□□□□ -0.84
HSE1YHL002W YOL036WQ08206 761 aa9.78□□□□□ -0.84
HSE1YHL002W YFR006WP43590 535 aa9.77□□□□□ -0.84
HSE1YHL002W RAM2P29703 316 aa9.76□□□□□ -0.85
HSE1YHL002W STS1P38637 319 aa9.75□□□□□ -0.85
HSE1YHL002W YNL035CP53962 389 aaKnown RBP9.73□□□□□ -0.85
HSE1YHL002W SEC61P32915 480 aa9.72□□□□□ -0.85
HSE1YHL002W MAK11P20484 414 aaKnown RBP9.67□□□□□ -0.86
HSE1YHL002W VMA1P17255 1071 aaKnown RBP9.63□□□□□ -0.87
HSE1YHL002W BCK2P33306 851 aa9.63□□□□□ -0.87
HSE1YHL002W TFG1P41895 735 aaPredicted RBP9.62□□□□□ -0.87
HSE1YHL002W SAP30P38429 201 aa9.6□□□□□ -0.87
HSE1YHL002W MIF2P35201 549 aa9.59□□□□□ -0.87
HSE1YHL002W SAM3Q08986 587 aa9.55□□□□□ -0.88
HSE1YHL002W COQ8P27697 501 aa9.54□□□□□ -0.88
HSE1YHL002W DMA1P38823 416 aa9.54□□□□□ -0.88
HSE1YHL002W RQC2Q12532 1038 aaKnown RBP9.52□□□□□ -0.88
HSE1YHL002W CHL1P22516 861 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms