RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W MTC1P47018 478 aaKnown RBP13.98□□□□□ -0.17
RTT102YGR275W FAP1P53971 965 aa13.14□□□□□ -0.31
RTT102YGR275W DRS1P32892 752 aaKnown RBP12.69□□□□□ -0.38
RTT102YGR275W PRY3P47033 881 aa12.35□□□□□ -0.43
RTT102YGR275W PRI1P10363 409 aa12.01□□□□□ -0.49
RTT102YGR275W AAD16Q02895 342 aa12□□□□□ -0.49
RTT102YGR275W ISW2Q08773 1120 aa11.71□□□□□ -0.53
RTT102YGR275W RPG1P38249 964 aaKnown RBP11.6□□□□□ -0.55
RTT102YGR275W YCK3P39962 524 aa11.53□□□□□ -0.56
RTT102YGR275W HAA1Q12753 694 aaKnown RBP11.5□□□□□ -0.57
RTT102YGR275W TSR3Q12094 313 aaKnown RBP11.37□□□□□ -0.59
RTT102YGR275W DIP2Q12220 943 aaPredicted RBP11.25□□□□□ -0.61
RTT102YGR275W RSE1Q04693 1361 aaKnown RBP11□□□□□ -0.65
RTT102YGR275W MRPL32P25348 183 aa10.93□□□□□ -0.66
RTT102YGR275W REB1P21538 810 aa10.71□□□□□ -0.69
RTT102YGR275W RPL17AP05740 184 aaKnown RBP10.7□□□□□ -0.7
RTT102YGR275W RPL17BP46990 184 aaKnown RBP10.7□□□□□ -0.7
RTT102YGR275W AVT3P36062 692 aa10.69□□□□□ -0.7
RTT102YGR275W YGL015CP33199 130 aa10.56□□□□□ -0.72
RTT102YGR275W BFR2Q06631 534 aaKnown RBP10.37□□□□□ -0.75
RTT102YGR275W CDC27P38042 758 aa10.28□□□□□ -0.76
RTT102YGR275W SPT21P35209 758 aa10.14□□□□□ -0.79
RTT102YGR275W YKR023WP36119 530 aaKnown RBP10.13□□□□□ -0.79
RTT102YGR275W UBP10P53874 792 aaPredicted RBP10.03□□□□□ -0.8
RTT102YGR275W MAP2P38174 421 aaKnown RBP10.02□□□□□ -0.81
RTT102YGR275W HOP09932 586 aa9.97□□□□□ -0.81
RTT102YGR275W DCD1P06773 312 aa9.96□□□□□ -0.82
RTT102YGR275W TFC8Q12308 588 aa9.93□□□□□ -0.82
RTT102YGR275W BUD31P25337 157 aaPredicted RBP9.85□□□□□ -0.83
RTT102YGR275W SCY1P53009 804 aa9.77□□□□□ -0.85
RTT102YGR275W RIM101P33400 625 aa9.69□□□□□ -0.86
RTT102YGR275W SLX5P32828 619 aaKnown RBP9.66□□□□□ -0.86
RTT102YGR275W TIF4632P39936 914 aaKnown RBP9.66□□□□□ -0.86
RTT102YGR275W BCH2P36122 765 aa9.6□□□□□ -0.87
RTT102YGR275W TGL3P40308 642 aa9.57□□□□□ -0.88
RTT102YGR275W UBP9P39967 754 aa9.45□□□□□ -0.9
RTT102YGR275W SIS1P25294 352 aaKnown RBP9.4□□□□□ -0.9
RTT102YGR275W OXP1P28273 1286 aa9.36□□□□□ -0.91
RTT102YGR275W EPS1P40557 701 aa9.34□□□□□ -0.91
RTT102YGR275W PTP3P40048 928 aa9.32□□□□□ -0.92
RTT102YGR275W BDF1P35817 686 aa9.3□□□□□ -0.92
RTT102YGR275W YIL055CP40523 627 aaKnown RBP9.29□□□□□ -0.92
RTT102YGR275W BBC1P47068 1157 aa9.13□□□□□ -0.95
RTT102YGR275W RSM7P47150 247 aa9.11□□□□□ -0.95
RTT102YGR275W YOR238WQ08634 303 aa9.11□□□□□ -0.95
RTT102YGR275W YAH1Q12184 172 aaKnown RBP9.11□□□□□ -0.95
RTT102YGR275W YBL029C-AQ3E756 94 aa9.09□□□□□ -0.95
RTT102YGR275W MST1P07236 462 aa9.08□□□□□ -0.96
RTT102YGR275W AI2P03876 854 aa9.07□□□□□ -0.96
RTT102YGR275W NSR1P27476 414 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97 RIP-Chip
RTT102YGR275W YAP5P40574 245 aa8.99□□□□□ -0.97
RTT102YGR275W VNX1P42839 908 aa8.94□□□□□ -0.98
RTT102YGR275W WSC3Q12215 556 aa8.92□□□□□ -0.98
RTT102YGR275W TFA1P36100 482 aa8.9□□□□□ -0.98
RTT102YGR275W SPP1Q03012 353 aa8.9□□□□□ -0.98
RTT102YGR275W YLR271WQ06152 274 aa8.87□□□□□ -0.99
RTT102YGR275W GTT3P39996 337 aa8.86□□□□□ -0.99
RTT102YGR275W PSD2P53037 1138 aaKnown RBP8.78□□□□□ -1
RTT102YGR275W TIF11P38912 153 aaKnown RBP8.77□□□□□ -1.01
RTT102YGR275W PIB1Q06651 286 aa8.77□□□□□ -1.01
RTT102YGR275W MRM1P25270 412 aa8.74□□□□□ -1.01
RTT102YGR275W YJL171CP46992 396 aa8.7□□□□□ -1.02
RTT102YGR275W FKH1P40466 484 aa8.69□□□□□ -1.02
RTT102YGR275W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
RTT102YGR275W AIR2Q12476 344 aaKnown RBP8.69□□□□□ -1.02
RTT102YGR275W SSP1P38871 571 aa8.67□□□□□ -1.02
RTT102YGR275W ULI1P43604 169 aa8.65□□□□□ -1.02
RTT102YGR275W LDB19Q12502 818 aa8.65□□□□□ -1.02
RTT102YGR275W IOC2Q12072 812 aa8.58□□□□□ -1.04
RTT102YGR275W CST9Q06032 482 aa8.56□□□□□ -1.04
RTT102YGR275W MSB4Q12317 492 aa8.56□□□□□ -1.04
RTT102YGR275W SET4P42948 560 aa8.54□□□□□ -1.04
RTT102YGR275W YMR1P47147 688 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
RTT102YGR275W EAP1P36041 632 aaKnown RBP8.53□□□□□ -1.04
RTT102YGR275W BMT6Q12291 365 aa8.53□□□□□ -1.04
RTT102YGR275W DBP1P24784 617 aaKnown RBP8.52□□□□□ -1.05
RTT102YGR275W YFR006WP43590 535 aa8.52□□□□□ -1.05
RTT102YGR275W YOL036WQ08206 761 aa8.52□□□□□ -1.05
RTT102YGR275W RTG3P38165 486 aa8.5□□□□□ -1.05
RTT102YGR275W VPS29P38759 282 aa8.5□□□□□ -1.05
RTT102YGR275W MGA2P40578 1113 aa8.5□□□□□ -1.05
RTT102YGR275W TRP5P00931 707 aaKnown RBP8.46□□□□□ -1.06
RTT102YGR275W RTG1P32607 177 aa8.46□□□□□ -1.06
RTT102YGR275W STS1P38637 319 aa8.45□□□□□ -1.06
RTT102YGR275W VMA1P17255 1071 aaKnown RBP8.44□□□□□ -1.06
RTT102YGR275W NCR1Q12200 1170 aa8.4□□□□□ -1.06
RTT102YGR275W RCR1P38212 213 aa8.39□□□□□ -1.07
RTT102YGR275W YNL035CP53962 389 aaKnown RBP8.38□□□□□ -1.07
RTT102YGR275W SAM3Q08986 587 aa8.37□□□□□ -1.07
RTT102YGR275W SEC61P32915 480 aa8.34□□□□□ -1.07
RTT102YGR275W TFG1P41895 735 aaPredicted RBP8.31□□□□□ -1.08
RTT102YGR275W GYP5Q12344 894 aa8.29□□□□□ -1.08
RTT102YGR275W ABP1P15891 592 aaKnown RBP8.26□□□□□ -1.09
RTT102YGR275W HTA1P04911 132 aaKnown RBP8.24□□□□□ -1.09
RTT102YGR275W HTA2P04912 132 aa8.24□□□□□ -1.09
RTT102YGR275W DCW1P36091 449 aa8.24□□□□□ -1.09
RTT102YGR275W SAP30P38429 201 aa8.24□□□□□ -1.09
RTT102YGR275W JIP4Q03361 876 aa8.24□□□□□ -1.09
RTT102YGR275W DAN4P47179 1161 aa8.22□□□□□ -1.09
RTT102YGR275W YEL023CP39992 682 aa8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms