RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C MTC1P47018 478 aaKnown RBP12.37□□□□□ -0.43
PDX1YGR193C FAP1P53971 965 aa11.48□□□□□ -0.57
PDX1YGR193C DRS1P32892 752 aaKnown RBP11.2□□□□□ -0.62
PDX1YGR193C PRY3P47033 881 aa10.83□□□□□ -0.68
PDX1YGR193C PRI1P10363 409 aa10.61□□□□□ -0.71
PDX1YGR193C AAD16Q02895 342 aa10.56□□□□□ -0.72
PDX1YGR193C YCK3P39962 524 aa10.31□□□□□ -0.76
PDX1YGR193C ISW2Q08773 1120 aa10.27□□□□□ -0.77
PDX1YGR193C RPG1P38249 964 aaKnown RBP10.22□□□□□ -0.77
PDX1YGR193C HAA1Q12753 694 aaKnown RBP10.08□□□□□ -0.8
PDX1YGR193C TSR3Q12094 313 aaKnown RBP10.03□□□□□ -0.8
PDX1YGR193C DIP2Q12220 943 aaPredicted RBP9.93□□□□□ -0.82
PDX1YGR193C RSE1Q04693 1361 aaKnown RBP9.69□□□□□ -0.86
PDX1YGR193C MRPL32P25348 183 aa9.58□□□□□ -0.88
PDX1YGR193C AVT3P36062 692 aa9.51□□□□□ -0.89
PDX1YGR193C RPL17AP05740 184 aaKnown RBP9.44□□□□□ -0.9
PDX1YGR193C RPL17BP46990 184 aaKnown RBP9.44□□□□□ -0.9
PDX1YGR193C REB1P21538 810 aa9.39□□□□□ -0.91
PDX1YGR193C YGL015CP33199 130 aa9.27□□□□□ -0.93
PDX1YGR193C BFR2Q06631 534 aaKnown RBP9.14□□□□□ -0.95
PDX1YGR193C CDC27P38042 758 aa9.13□□□□□ -0.95
PDX1YGR193C SPT21P35209 758 aa9.03□□□□□ -0.96
PDX1YGR193C YKR023WP36119 530 aaKnown RBP9.01□□□□□ -0.97
PDX1YGR193C MAP2P38174 421 aaKnown RBP8.86□□□□□ -0.99
PDX1YGR193C UBP10P53874 792 aaPredicted RBP8.84□□□□□ -0.99
PDX1YGR193C DCD1P06773 312 aa8.82□□□□□ -1
PDX1YGR193C HOP09932 586 aa8.82□□□□□ -1
PDX1YGR193C TFC8Q12308 588 aa8.8□□□□□ -1
PDX1YGR193C BUD31P25337 157 aaPredicted RBP8.67□□□□□ -1.02
PDX1YGR193C RIM101P33400 625 aa8.62□□□□□ -1.03
PDX1YGR193C SCY1P53009 804 aa8.61□□□□□ -1.03
PDX1YGR193C BCH2P36122 765 aa8.5□□□□□ -1.05
PDX1YGR193C SLX5P32828 619 aaKnown RBP8.49□□□□□ -1.05
PDX1YGR193C TIF4632P39936 914 aaKnown RBP8.44□□□□□ -1.06
PDX1YGR193C TGL3P40308 642 aa8.42□□□□□ -1.06
PDX1YGR193C OXP1P28273 1286 aa8.34□□□□□ -1.07
PDX1YGR193C EPS1P40557 701 aa8.27□□□□□ -1.09
PDX1YGR193C BDF1P35817 686 aa8.24□□□□□ -1.09
PDX1YGR193C UBP9P39967 754 aa8.23□□□□□ -1.09
PDX1YGR193C SIS1P25294 352 aaKnown RBP8.2□□□□□ -1.1
PDX1YGR193C PTP3P40048 928 aa8.17□□□□□ -1.1
PDX1YGR193C YIL055CP40523 627 aaKnown RBP8.13□□□□□ -1.11
PDX1YGR193C MST1P07236 462 aa8.05□□□□□ -1.12
PDX1YGR193C RSM7P47150 247 aa8.05□□□□□ -1.12
PDX1YGR193C YAH1Q12184 172 aaKnown RBP8.03□□□□□ -1.12
PDX1YGR193C AI2P03876 854 aa8.02□□□□□ -1.13
PDX1YGR193C YBL029C-AQ3E756 94 aa8.01□□□□□ -1.13
PDX1YGR193C BBC1P47068 1157 aa7.99□□□□□ -1.13
PDX1YGR193C YOR238WQ08634 303 aa7.99□□□□□ -1.13
PDX1YGR193C NSR1P27476 414 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
PDX1YGR193C YAP5P40574 245 aa7.89□□□□□ -1.15
PDX1YGR193C VNX1P42839 908 aa7.89□□□□□ -1.15
PDX1YGR193C YLR271WQ06152 274 aa7.89□□□□□ -1.15
PDX1YGR193C WSC3Q12215 556 aa7.83□□□□□ -1.16
PDX1YGR193C PSD2P53037 1138 aaKnown RBP7.8□□□□□ -1.16
PDX1YGR193C TFA1P36100 482 aa7.79□□□□□ -1.16
PDX1YGR193C SPP1Q03012 353 aa7.79□□□□□ -1.16
PDX1YGR193C GTT3P39996 337 aa7.73□□□□□ -1.17
PDX1YGR193C PIB1Q06651 286 aa7.73□□□□□ -1.17
PDX1YGR193C MRM1P25270 412 aa7.72□□□□□ -1.17
PDX1YGR193C TIF11P38912 153 aaKnown RBP7.72□□□□□ -1.17
PDX1YGR193C AIR2Q12476 344 aaKnown RBP7.69□□□□□ -1.18
PDX1YGR193C FKH1P40466 484 aa7.68□□□□□ -1.18
PDX1YGR193C SSP1P38871 571 aa7.67□□□□□ -1.18
PDX1YGR193C LDB19Q12502 818 aa7.62□□□□□ -1.19
PDX1YGR193C CST9Q06032 482 aa7.61□□□□□ -1.19
PDX1YGR193C IOC2Q12072 812 aa7.61□□□□□ -1.19
PDX1YGR193C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
PDX1YGR193C ULI1P43604 169 aa7.6□□□□□ -1.19
PDX1YGR193C VPS29P38759 282 aa7.57□□□□□ -1.2
PDX1YGR193C YJL171CP46992 396 aa7.55□□□□□ -1.2
PDX1YGR193C YFR006WP43590 535 aa7.53□□□□□ -1.2
PDX1YGR193C YMR1P47147 688 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
PDX1YGR193C YOL036WQ08206 761 aa7.53□□□□□ -1.2
PDX1YGR193C MSB4Q12317 492 aa7.53□□□□□ -1.2
PDX1YGR193C DBP1P24784 617 aaKnown RBP7.52□□□□□ -1.21
PDX1YGR193C SET4P42948 560 aa7.51□□□□□ -1.21
PDX1YGR193C RTG3P38165 486 aa7.5□□□□□ -1.21
PDX1YGR193C STS1P38637 319 aa7.5□□□□□ -1.21
PDX1YGR193C MGA2P40578 1113 aa7.5□□□□□ -1.21
PDX1YGR193C TRP5P00931 707 aaKnown RBP7.47□□□□□ -1.21
PDX1YGR193C VMA1P17255 1071 aaKnown RBP7.47□□□□□ -1.21
PDX1YGR193C RCR1P38212 213 aa7.47□□□□□ -1.21
PDX1YGR193C EAP1P36041 632 aaKnown RBP7.46□□□□□ -1.22
PDX1YGR193C BMT6Q12291 365 aa7.46□□□□□ -1.22
PDX1YGR193C RTG1P32607 177 aa7.44□□□□□ -1.22
PDX1YGR193C SAM3Q08986 587 aa7.42□□□□□ -1.22
PDX1YGR193C YNL035CP53962 389 aaKnown RBP7.37□□□□□ -1.23
PDX1YGR193C NCR1Q12200 1170 aa7.37□□□□□ -1.23
PDX1YGR193C SEC61P32915 480 aa7.34□□□□□ -1.23
PDX1YGR193C DAN4P47179 1161 aa7.29□□□□□ -1.24
PDX1YGR193C GYP5Q12344 894 aa7.29□□□□□ -1.24
PDX1YGR193C DCW1P36091 449 aa7.26□□□□□ -1.25
PDX1YGR193C HTA1P04911 132 aaKnown RBP7.24□□□□□ -1.25
PDX1YGR193C HTA2P04912 132 aa7.24□□□□□ -1.25
PDX1YGR193C ABP1P15891 592 aaKnown RBP7.24□□□□□ -1.25
PDX1YGR193C JIP4Q03361 876 aa7.24□□□□□ -1.25
PDX1YGR193C SAP30P38429 201 aa7.23□□□□□ -1.25
PDX1YGR193C TFG1P41895 735 aaPredicted RBP7.21□□□□□ -1.26
PDX1YGR193C YEL023CP39992 682 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms