RNA–Protein interactions for RNA: YGR112W

SHY1, Transcript of Mitochondrial inner membrane protein required for complex IV assembly, yeastyeast

Gene SHY1, Length 1,170 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHY1YGR112W SGS1P35187 1447 aa16.68■□□□□ 0.26
SHY1YGR112W INO80P53115 1489 aa16.29■□□□□ 0.2
SHY1YGR112W TCB3Q03640 1545 aaKnown RBP16.04■□□□□ 0.16
SHY1YGR112W SPA2P23201 1466 aaKnown RBP16.01■□□□□ 0.15
SHY1YGR112W SSN2P38931 1420 aa15.97■□□□□ 0.15
SHY1YGR112W TY1B-DR4Q07793 1604 aa15.83■□□□□ 0.13
SHY1YGR112W MON2P48563 1636 aaPredicted RBP15.68■□□□□ 0.1
SHY1YGR112W HSL1P34244 1518 aa15.57■□□□□ 0.08
SHY1YGR112W SPT6P23615 1451 aaKnown RBP15.52■□□□□ 0.07
SHY1YGR112W DRS1P32892 752 aaKnown RBP15.49■□□□□ 0.07
SHY1YGR112W SWR1Q05471 1514 aa15.44■□□□□ 0.06
SHY1YGR112W HIR3P47171 1648 aa15.3■□□□□ 0.04
SHY1YGR112W XRN1P22147 1528 aaKnown RBP15.22■□□□□ 0.03
SHY1YGR112W REV3P14284 1504 aa15.02□□□□□ -0.01
SHY1YGR112W DNA2P38859 1522 aa14.95□□□□□ -0.02
SHY1YGR112W SIN3P22579 1536 aa14.92□□□□□ -0.02
SHY1YGR112W THO2P53552 1597 aaKnown RBP14.9□□□□□ -0.02
SHY1YGR112W KOG1P38873 1557 aa14.89□□□□□ -0.03
SHY1YGR112W TAF2P23255 1407 aa14.83□□□□□ -0.03
SHY1YGR112W SSK2P53599 1579 aa14.83□□□□□ -0.04
SHY1YGR112W BUD4P47136 1447 aa14.72□□□□□ -0.05
SHY1YGR112W ESP1Q03018 1630 aa14.7□□□□□ -0.06
SHY1YGR112W ECM5Q03214 1411 aa14.67□□□□□ -0.06
SHY1YGR112W MYO2P19524 1574 aaKnown RBP14.64□□□□□ -0.07
SHY1YGR112W ATG2P53855 1592 aa14.61□□□□□ -0.07
SHY1YGR112W SKI3P17883 1432 aaKnown RBP14.57□□□□□ -0.08
SHY1YGR112W YPK9Q12697 1472 aa14.48□□□□□ -0.09
SHY1YGR112W PEP1P32319 1579 aa14.47□□□□□ -0.09
SHY1YGR112W POL1P13382 1468 aa14.45□□□□□ -0.1
SHY1YGR112W MDS3P53094 1487 aa14.45□□□□□ -0.1
SHY1YGR112W CHD1P32657 1468 aa14.41□□□□□ -0.1
SHY1YGR112W STU1P38198 1513 aa14.41□□□□□ -0.1
SHY1YGR112W MMS22Q06164 1454 aa14.37□□□□□ -0.11
SHY1YGR112W SCC2Q04002 1493 aa14.34□□□□□ -0.11
SHY1YGR112W YTA7P40340 1379 aa14.29□□□□□ -0.12
SHY1YGR112W RPO31P04051 1460 aa14.28□□□□□ -0.12
SHY1YGR112W RKR1Q04781 1562 aa14.28□□□□□ -0.12
SHY1YGR112W BPT1P14772 1559 aa14.25□□□□□ -0.13
SHY1YGR112W YOR1P53049 1477 aa14.24□□□□□ -0.13
SHY1YGR112W UFD4P33202 1483 aa14.21□□□□□ -0.13
SHY1YGR112W TOP2P06786 1428 aaKnown RBP14.18□□□□□ -0.14
SHY1YGR112W YCF1P39109 1515 aaKnown RBP14.16□□□□□ -0.14
SHY1YGR112W SMC4Q12267 1418 aa14.14□□□□□ -0.15
SHY1YGR112W MYO4P32492 1471 aa14.12□□□□□ -0.15
SHY1YGR112W SAS10Q12136 610 aaPredicted RBP14.12□□□□□ -0.15
SHY1YGR112W TY2B-LR1P0C2J3 1770 aa14.09□□□□□ -0.15
SHY1YGR112W TY2B-FP0CX63 1770 aa14.09□□□□□ -0.15
SHY1YGR112W TY2B-GR2P0CX64 1770 aa14.09□□□□□ -0.15
SHY1YGR112W TY2B-CP25384 1770 aa14.09□□□□□ -0.15
SHY1YGR112W TY2B-DR2Q03494 1770 aa14.09□□□□□ -0.15
SHY1YGR112W TY1B-DR1Q03855 1755 aa14.09□□□□□ -0.15
SHY1YGR112W TY2B-DR3Q07791 1770 aaKnown RBP14.09□□□□□ -0.15
SHY1YGR112W TY2B-OR1Q12113 1770 aa14.09□□□□□ -0.15
SHY1YGR112W TY2B-DR1Q12472 1770 aa14.09□□□□□ -0.15
SHY1YGR112W TY2B-OR2Q12501 1770 aa14.09□□□□□ -0.15
SHY1YGR112W TY1B-DR3Q99231 1755 aa14.04□□□□□ -0.16
SHY1YGR112W TY2B-BQ12491 1770 aa13.97□□□□□ -0.17
SHY1YGR112W SNQ2P32568 1501 aaKnown RBP13.95□□□□□ -0.18
SHY1YGR112W STH1P32597 1359 aa13.92□□□□□ -0.18
SHY1YGR112W TAF7Q05021 590 aa13.91□□□□□ -0.18
SHY1YGR112W TY1B-BRQ12193 1756 aa13.88□□□□□ -0.19
SHY1YGR112W TY1B-GR3Q12316 1755 aa13.88□□□□□ -0.19
SHY1YGR112W TY1B-ORQ92393 1755 aa13.88□□□□□ -0.19
SHY1YGR112W SPP41P38904 1435 aa13.87□□□□□ -0.19
SHY1YGR112W TY1B-HO13535 1793 aa13.86□□□□□ -0.19
SHY1YGR112W TY1B-DR5P0C2I2 1755 aa13.86□□□□□ -0.19
SHY1YGR112W TY1B-DR6P0C2I3 1755 aa13.86□□□□□ -0.19
SHY1YGR112W TY1B-LR2P0C2I5 1755 aa13.86□□□□□ -0.19
SHY1YGR112W TY1B-LR3P0C2I6 1755 aaKnown RBP13.86□□□□□ -0.19
SHY1YGR112W TY1B-PR1P0C2I9 1755 aaKnown RBP13.86□□□□□ -0.19
SHY1YGR112W TY1B-PR2P0C2J0 1756 aa13.86□□□□□ -0.19
SHY1YGR112W TY1B-PR3P0C2J1 1755 aaKnown RBP13.86□□□□□ -0.19
SHY1YGR112W TY1B-JR1P47098 1755 aa13.86□□□□□ -0.19
SHY1YGR112W TY1B-ML2Q03434 1755 aaKnown RBP13.86□□□□□ -0.19
SHY1YGR112W TY1B-ER1Q03612 1755 aa13.86□□□□□ -0.19
SHY1YGR112W TY1B-ML1Q04711 1755 aaKnown RBP13.86□□□□□ -0.19
SHY1YGR112W TY1B-GR2Q12269 1755 aa13.86□□□□□ -0.19
SHY1YGR112W TY1B-OLQ12273 1755 aa13.86□□□□□ -0.19
SHY1YGR112W TY1B-PLQ12414 1755 aaKnown RBP13.86□□□□□ -0.19
SHY1YGR112W RQC2Q12532 1038 aaKnown RBP13.86□□□□□ -0.19
SHY1YGR112W TRM732Q03496 1420 aa13.86□□□□□ -0.19
SHY1YGR112W RSE1Q04693 1361 aaKnown RBP13.84□□□□□ -0.19
SHY1YGR112W CDC25P04821 1589 aa13.81□□□□□ -0.2
SHY1YGR112W MLP2P40457 1679 aa13.81□□□□□ -0.2
SHY1YGR112W PDR15Q04182 1529 aaKnown RBP13.79□□□□□ -0.2
SHY1YGR112W IKI3Q06706 1349 aaKnown RBP13.77□□□□□ -0.21
SHY1YGR112W TSC11P40061 1430 aa13.76□□□□□ -0.21
SHY1YGR112W VTH1P40438 1549 aa13.74□□□□□ -0.21
SHY1YGR112W VTH2P40890 1549 aa13.74□□□□□ -0.21
SHY1YGR112W PAN1P32521 1480 aa13.74□□□□□ -0.21
SHY1YGR112W IFH1P39520 1085 aa13.74□□□□□ -0.21
SHY1YGR112W ULS1Q08562 1619 aa13.73□□□□□ -0.21
SHY1YGR112W GEA1P47102 1408 aaPredicted RBP13.71□□□□□ -0.22
SHY1YGR112W SNT2P53127 1403 aa13.65□□□□□ -0.22
SHY1YGR112W TY1B-JR2P47100 1755 aaKnown RBP13.65□□□□□ -0.22
SHY1YGR112W TY1B-ER2Q03619 1755 aa13.65□□□□□ -0.22
SHY1YGR112W TY1B-MR1Q04214 1755 aa13.65□□□□□ -0.22
SHY1YGR112W TY1B-MR2Q04670 1755 aaKnown RBP13.65□□□□□ -0.22
SHY1YGR112W TY1B-LR1Q12088 1755 aaKnown RBP13.65□□□□□ -0.22
SHY1YGR112W TY1B-NL1Q12112 1755 aa13.65□□□□□ -0.22
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms