RNA–Protein interactions for RNA: YGR108W

CLB1, Transcript of B-type cyclin involved in cell cycle progression, yeastyeast

Gene CLB1, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLB1YGR108W DRS1P32892 752 aaKnown RBP11.8□□□□□ -0.52
CLB1YGR108W MTC1P47018 478 aaKnown RBP11.3□□□□□ -0.6
CLB1YGR108W FAP1P53971 965 aa10.75□□□□□ -0.69
CLB1YGR108W BFR2Q06631 534 aaKnown RBP10.41□□□□□ -0.74
CLB1YGR108W PRY3P47033 881 aa10.14□□□□□ -0.79
CLB1YGR108W TFA1P36100 482 aa10.11□□□□□ -0.79
CLB1YGR108W DIP2Q12220 943 aaPredicted RBP9.9□□□□□ -0.82
CLB1YGR108W AVT3P36062 692 aa9.88□□□□□ -0.83
CLB1YGR108W YCK3P39962 524 aa9.43□□□□□ -0.9
CLB1YGR108W AAD16Q02895 342 aa9.41□□□□□ -0.9
CLB1YGR108W SGS1P35187 1447 aa9.34□□□□□ -0.91
CLB1YGR108W HAA1Q12753 694 aaKnown RBP9.31□□□□□ -0.92
CLB1YGR108W PRI1P10363 409 aa9.29□□□□□ -0.92
CLB1YGR108W RSE1Q04693 1361 aaKnown RBP9.23□□□□□ -0.93
CLB1YGR108W SPA2P23201 1466 aaKnown RBP9.19□□□□□ -0.94
CLB1YGR108W SSN2P38931 1420 aa9.13□□□□□ -0.95
CLB1YGR108W ISW2Q08773 1120 aa9.13□□□□□ -0.95
CLB1YGR108W RQC2Q12532 1038 aaKnown RBP9.11□□□□□ -0.95
CLB1YGR108W RPG1P38249 964 aaKnown RBP8.97□□□□□ -0.97
CLB1YGR108W INO80P53115 1489 aa8.91□□□□□ -0.98
CLB1YGR108W RPL17AP05740 184 aaKnown RBP8.85□□□□□ -0.99
CLB1YGR108W RPL17BP46990 184 aaKnown RBP8.85□□□□□ -0.99
CLB1YGR108W TSR3Q12094 313 aaKnown RBP8.8□□□□□ -1
CLB1YGR108W REB1P21538 810 aa8.71□□□□□ -1.02
CLB1YGR108W TCB3Q03640 1545 aaKnown RBP8.64□□□□□ -1.03
CLB1YGR108W SKI3P17883 1432 aaKnown RBP8.61□□□□□ -1.03
CLB1YGR108W RIM101P33400 625 aa8.54□□□□□ -1.04
CLB1YGR108W SPT21P35209 758 aa8.54□□□□□ -1.04
CLB1YGR108W PTP3P40048 928 aa8.51□□□□□ -1.05
CLB1YGR108W TY1B-DR4Q07793 1604 aa8.51□□□□□ -1.05
CLB1YGR108W DMA1P38823 416 aa8.47□□□□□ -1.05
CLB1YGR108W HSL1P34244 1518 aa8.47□□□□□ -1.05
CLB1YGR108W SPT6P23615 1451 aaKnown RBP8.44□□□□□ -1.06
CLB1YGR108W MRPL32P25348 183 aa8.41□□□□□ -1.06
CLB1YGR108W XRN1P22147 1528 aaKnown RBP8.39□□□□□ -1.07
CLB1YGR108W MMS22Q06164 1454 aa8.39□□□□□ -1.07
CLB1YGR108W YGL015CP33199 130 aa8.38□□□□□ -1.07
CLB1YGR108W SSP1P38871 571 aa8.37□□□□□ -1.07
CLB1YGR108W HIR3P47171 1648 aa8.35□□□□□ -1.07
CLB1YGR108W CHD1P32657 1468 aa8.35□□□□□ -1.07
CLB1YGR108W NSR1P27476 414 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
CLB1YGR108W NOP2P40991 618 aaKnown RBP8.32□□□□□ -1.08
CLB1YGR108W REV3P14284 1504 aa8.29□□□□□ -1.08
CLB1YGR108W OXP1P28273 1286 aa8.27□□□□□ -1.09
CLB1YGR108W TAF2P23255 1407 aa8.26□□□□□ -1.09
CLB1YGR108W BUD31P25337 157 aaPredicted RBP8.24□□□□□ -1.09
CLB1YGR108W THO2P53552 1597 aaKnown RBP8.24□□□□□ -1.09
CLB1YGR108W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
CLB1YGR108W SSK2P53599 1579 aa8.21□□□□□ -1.1
CLB1YGR108W SIN3P22579 1536 aa8.21□□□□□ -1.1
CLB1YGR108W YIL055CP40523 627 aaKnown RBP8.2□□□□□ -1.1
CLB1YGR108W SAS10Q12136 610 aaPredicted RBP8.2□□□□□ -1.1
CLB1YGR108W YAH1Q12184 172 aaKnown RBP8.2□□□□□ -1.1
CLB1YGR108W UFD4P33202 1483 aa8.18□□□□□ -1.1
CLB1YGR108W YKR023WP36119 530 aaKnown RBP8.16□□□□□ -1.1
CLB1YGR108W STU1P38198 1513 aa8.15□□□□□ -1.11
CLB1YGR108W TRM732Q03496 1420 aa8.14□□□□□ -1.11
CLB1YGR108W SWR1Q05471 1514 aa8.14□□□□□ -1.11
CLB1YGR108W YLR271WQ06152 274 aa8.12□□□□□ -1.11
CLB1YGR108W ESP1Q03018 1630 aa8.12□□□□□ -1.11
CLB1YGR108W YTA7P40340 1379 aa8.11□□□□□ -1.11
CLB1YGR108W BPT1P14772 1559 aa8.11□□□□□ -1.11
CLB1YGR108W MYO2P19524 1574 aaKnown RBP8.1□□□□□ -1.11
CLB1YGR108W POL1P13382 1468 aa8.1□□□□□ -1.11
CLB1YGR108W IKI3Q06706 1349 aaKnown RBP8.09□□□□□ -1.11
CLB1YGR108W MON2P48563 1636 aaPredicted RBP8.05□□□□□ -1.12
CLB1YGR108W RSM7P47150 247 aa8.04□□□□□ -1.12
CLB1YGR108W SCC2Q04002 1493 aa8.04□□□□□ -1.12
CLB1YGR108W MGA2P40578 1113 aa8.03□□□□□ -1.12
CLB1YGR108W TAF7Q05021 590 aa8.02□□□□□ -1.13
CLB1YGR108W SSM4P40318 1319 aa8.02□□□□□ -1.13
CLB1YGR108W SPP41P38904 1435 aa8.01□□□□□ -1.13
CLB1YGR108W TFC8Q12308 588 aa8.01□□□□□ -1.13
CLB1YGR108W HOP09932 586 aa7.99□□□□□ -1.13
CLB1YGR108W ECM5Q03214 1411 aa7.98□□□□□ -1.13
CLB1YGR108W LEO1P38439 464 aa7.98□□□□□ -1.13
CLB1YGR108W DNA2P38859 1522 aa7.97□□□□□ -1.13
CLB1YGR108W YPK9Q12697 1472 aa7.97□□□□□ -1.13
CLB1YGR108W BUD4P47136 1447 aa7.97□□□□□ -1.13
CLB1YGR108W ENP1P38333 483 aaKnown RBP7.96□□□□□ -1.13
CLB1YGR108W RKR1Q04781 1562 aa7.95□□□□□ -1.14
CLB1YGR108W POL5P39985 1022 aaKnown RBP7.95□□□□□ -1.14
CLB1YGR108W YOR1P53049 1477 aa7.94□□□□□ -1.14
CLB1YGR108W MYO4P32492 1471 aa7.93□□□□□ -1.14
CLB1YGR108W NUP170P38181 1502 aa7.92□□□□□ -1.14
CLB1YGR108W ATG2P53855 1592 aa7.92□□□□□ -1.14
CLB1YGR108W STH1P32597 1359 aa7.92□□□□□ -1.14
CLB1YGR108W IFH1P39520 1085 aa7.9□□□□□ -1.14
CLB1YGR108W SNQ2P32568 1501 aaKnown RBP7.9□□□□□ -1.14
CLB1YGR108W DCD1P06773 312 aa7.89□□□□□ -1.15
CLB1YGR108W RTT106P40161 455 aa7.89□□□□□ -1.15
CLB1YGR108W CST9Q06032 482 aa7.88□□□□□ -1.15
CLB1YGR108W SPT7P35177 1332 aa7.88□□□□□ -1.15
CLB1YGR108W CDC27P38042 758 aa7.87□□□□□ -1.15
CLB1YGR108W AI2P03876 854 aa7.86□□□□□ -1.15
CLB1YGR108W PSD2P53037 1138 aaKnown RBP7.86□□□□□ -1.15
CLB1YGR108W SMC4Q12267 1418 aa7.85□□□□□ -1.15
CLB1YGR108W GEA1P47102 1408 aaPredicted RBP7.83□□□□□ -1.16
CLB1YGR108W RPO31P04051 1460 aa7.83□□□□□ -1.16
CLB1YGR108W PAN1P32521 1480 aa7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms