RNA–Protein interactions for RNA: YGR104C

SRB5, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB5, Length 924 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB5YGR104C MTC1P47018 478 aaKnown RBP14.95□□□□□ -0.02
SRB5YGR104C FAP1P53971 965 aa13.93□□□□□ -0.18
SRB5YGR104C DRS1P32892 752 aaKnown RBP13.61□□□□□ -0.23
SRB5YGR104C PRY3P47033 881 aa13.07□□□□□ -0.32
SRB5YGR104C PRI1P10363 409 aa12.8□□□□□ -0.36
SRB5YGR104C AAD16Q02895 342 aa12.79□□□□□ -0.36
SRB5YGR104C ISW2Q08773 1120 aa12.54□□□□□ -0.4
SRB5YGR104C RPG1P38249 964 aaKnown RBP12.37□□□□□ -0.43
SRB5YGR104C HAA1Q12753 694 aaKnown RBP12.27□□□□□ -0.45
SRB5YGR104C YCK3P39962 524 aa12.18□□□□□ -0.46
SRB5YGR104C TSR3Q12094 313 aaKnown RBP12.07□□□□□ -0.48
SRB5YGR104C DIP2Q12220 943 aaPredicted RBP12.06□□□□□ -0.48
SRB5YGR104C RSE1Q04693 1361 aaKnown RBP11.79□□□□□ -0.52
SRB5YGR104C MRPL32P25348 183 aa11.68□□□□□ -0.54
SRB5YGR104C AVT3P36062 692 aa11.48□□□□□ -0.57
SRB5YGR104C REB1P21538 810 aa11.46□□□□□ -0.57
SRB5YGR104C RPL17AP05740 184 aaKnown RBP11.42□□□□□ -0.58
SRB5YGR104C RPL17BP46990 184 aaKnown RBP11.42□□□□□ -0.58
SRB5YGR104C BFR2Q06631 534 aaKnown RBP11.36□□□□□ -0.59
SRB5YGR104C YGL015CP33199 130 aa11.31□□□□□ -0.6
SRB5YGR104C CDC27P38042 758 aa10.92□□□□□ -0.66
SRB5YGR104C SPT21P35209 758 aa10.83□□□□□ -0.68
SRB5YGR104C YKR023WP36119 530 aaKnown RBP10.8□□□□□ -0.68
SRB5YGR104C UBP10P53874 792 aaPredicted RBP10.75□□□□□ -0.69
SRB5YGR104C MAP2P38174 421 aaKnown RBP10.65□□□□□ -0.7
SRB5YGR104C TFC8Q12308 588 aa10.61□□□□□ -0.71
SRB5YGR104C HOP09932 586 aa10.6□□□□□ -0.71
SRB5YGR104C DCD1P06773 312 aa10.54□□□□□ -0.72
SRB5YGR104C BUD31P25337 157 aaPredicted RBP10.48□□□□□ -0.73
SRB5YGR104C RIM101P33400 625 aa10.41□□□□□ -0.74
SRB5YGR104C SCY1P53009 804 aa10.39□□□□□ -0.75
SRB5YGR104C TIF4632P39936 914 aaKnown RBP10.36□□□□□ -0.75
SRB5YGR104C SLX5P32828 619 aaKnown RBP10.32□□□□□ -0.76
SRB5YGR104C TGL3P40308 642 aa10.27□□□□□ -0.77
SRB5YGR104C BCH2P36122 765 aa10.24□□□□□ -0.77
SRB5YGR104C UBP9P39967 754 aa10.14□□□□□ -0.79
SRB5YGR104C TFA1P36100 482 aa10.11□□□□□ -0.79
SRB5YGR104C OXP1P28273 1286 aa10.01□□□□□ -0.81
SRB5YGR104C SIS1P25294 352 aaKnown RBP9.99□□□□□ -0.81
SRB5YGR104C YIL055CP40523 627 aaKnown RBP9.99□□□□□ -0.81
SRB5YGR104C EPS1P40557 701 aa9.98□□□□□ -0.81
SRB5YGR104C PTP3P40048 928 aa9.96□□□□□ -0.82
SRB5YGR104C BDF1P35817 686 aa9.94□□□□□ -0.82
SRB5YGR104C BBC1P47068 1157 aa9.82□□□□□ -0.84
SRB5YGR104C RSM7P47150 247 aa9.79□□□□□ -0.84
SRB5YGR104C YOR238WQ08634 303 aa9.77□□□□□ -0.85
SRB5YGR104C MST1P07236 462 aa9.76□□□□□ -0.85
SRB5YGR104C AI2P03876 854 aa9.72□□□□□ -0.85
SRB5YGR104C YAH1Q12184 172 aaKnown RBP9.72□□□□□ -0.85
SRB5YGR104C NSR1P27476 414 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
SRB5YGR104C YBL029C-AQ3E756 94 aa9.66□□□□□ -0.86
SRB5YGR104C YAP5P40574 245 aa9.64□□□□□ -0.87
SRB5YGR104C VNX1P42839 908 aa9.56□□□□□ -0.88
SRB5YGR104C SPP1Q03012 353 aa9.51□□□□□ -0.89
SRB5YGR104C YLR271WQ06152 274 aa9.5□□□□□ -0.89
SRB5YGR104C WSC3Q12215 556 aa9.49□□□□□ -0.89
SRB5YGR104C GTT3P39996 337 aa9.48□□□□□ -0.89
SRB5YGR104C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
SRB5YGR104C SSP1P38871 571 aa9.44□□□□□ -0.9
SRB5YGR104C PSD2P53037 1138 aaKnown RBP9.41□□□□□ -0.9
SRB5YGR104C TIF11P38912 153 aaKnown RBP9.39□□□□□ -0.91
SRB5YGR104C MRM1P25270 412 aa9.35□□□□□ -0.91
SRB5YGR104C YJL171CP46992 396 aa9.32□□□□□ -0.92
SRB5YGR104C PIB1Q06651 286 aa9.3□□□□□ -0.92
SRB5YGR104C AIR2Q12476 344 aaKnown RBP9.28□□□□□ -0.92
SRB5YGR104C FKH1P40466 484 aa9.27□□□□□ -0.93
SRB5YGR104C ULI1P43604 169 aa9.26□□□□□ -0.93
SRB5YGR104C LDB19Q12502 818 aa9.24□□□□□ -0.93
SRB5YGR104C MGA2P40578 1113 aa9.23□□□□□ -0.93
SRB5YGR104C MSB4Q12317 492 aa9.22□□□□□ -0.93
SRB5YGR104C EAP1P36041 632 aaKnown RBP9.2□□□□□ -0.94
SRB5YGR104C YMR1P47147 688 aaKnown RBP RIP-Chip data9.19□□□□□ -0.94not detected
SRB5YGR104C IOC2Q12072 812 aa9.19□□□□□ -0.94
SRB5YGR104C RTG3P38165 486 aa9.16□□□□□ -0.94
SRB5YGR104C CST9Q06032 482 aa9.14□□□□□ -0.95
SRB5YGR104C BMT6Q12291 365 aa9.14□□□□□ -0.95
SRB5YGR104C DBP1P24784 617 aaKnown RBP9.13□□□□□ -0.95
SRB5YGR104C YOL036WQ08206 761 aa9.12□□□□□ -0.95
SRB5YGR104C VPS29P38759 282 aa9.11□□□□□ -0.95
SRB5YGR104C SET4P42948 560 aa9.1□□□□□ -0.95
SRB5YGR104C YFR006WP43590 535 aa9.07□□□□□ -0.96
SRB5YGR104C TRP5P00931 707 aaKnown RBP9.06□□□□□ -0.96
SRB5YGR104C VMA1P17255 1071 aaKnown RBP9.05□□□□□ -0.96
SRB5YGR104C RTG1P32607 177 aa9.05□□□□□ -0.96
SRB5YGR104C STS1P38637 319 aa9.02□□□□□ -0.97
SRB5YGR104C NCR1Q12200 1170 aa9.02□□□□□ -0.97
SRB5YGR104C SAM3Q08986 587 aa9.01□□□□□ -0.97
SRB5YGR104C YNL035CP53962 389 aaKnown RBP9□□□□□ -0.97
SRB5YGR104C SEC61P32915 480 aa8.99□□□□□ -0.97
SRB5YGR104C TFG1P41895 735 aaPredicted RBP8.96□□□□□ -0.98
SRB5YGR104C ABP1P15891 592 aaKnown RBP8.94□□□□□ -0.98
SRB5YGR104C RCR1P38212 213 aa8.93□□□□□ -0.98
SRB5YGR104C GYP5Q12344 894 aa8.9□□□□□ -0.98
SRB5YGR104C JIP4Q03361 876 aa8.89□□□□□ -0.99
SRB5YGR104C HTA1P04911 132 aaKnown RBP8.85□□□□□ -0.99
SRB5YGR104C HTA2P04912 132 aa8.85□□□□□ -0.99
SRB5YGR104C DAN4P47179 1161 aa8.82□□□□□ -1
SRB5YGR104C DCW1P36091 449 aa8.81□□□□□ -1
SRB5YGR104C SAP30P38429 201 aa8.79□□□□□ -1
SRB5YGR104C YDL129WQ07555 291 aa8.79□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms