RNA–Protein interactions for RNA: YGL247W

BRR6, Transcript of Essential nuclear envelope integral membrane protein, yeastyeast

Gene BRR6, Length 594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR6YGL247W MTC1P47018 478 aaKnown RBP14.33□□□□□ -0.12
BRR6YGL247W DRS1P32892 752 aaKnown RBP13.25□□□□□ -0.29
BRR6YGL247W FAP1P53971 965 aa13.08□□□□□ -0.32
BRR6YGL247W PRY3P47033 881 aa12.31□□□□□ -0.44
BRR6YGL247W PRI1P10363 409 aa12.16□□□□□ -0.46
BRR6YGL247W AAD16Q02895 342 aa12.1□□□□□ -0.47
BRR6YGL247W ISW2Q08773 1120 aa11.88□□□□□ -0.51
BRR6YGL247W RPG1P38249 964 aaKnown RBP11.8□□□□□ -0.52
BRR6YGL247W DIP2Q12220 943 aaPredicted RBP11.66□□□□□ -0.54
BRR6YGL247W YCK3P39962 524 aa11.64□□□□□ -0.55
BRR6YGL247W TSR3Q12094 313 aaKnown RBP11.52□□□□□ -0.57
BRR6YGL247W HAA1Q12753 694 aaKnown RBP11.49□□□□□ -0.57
BRR6YGL247W RSE1Q04693 1361 aaKnown RBP11.3□□□□□ -0.6
BRR6YGL247W AVT3P36062 692 aa11.19□□□□□ -0.62
BRR6YGL247W MRPL32P25348 183 aa11.02□□□□□ -0.65
BRR6YGL247W RPL17AP05740 184 aaKnown RBP10.98□□□□□ -0.65
BRR6YGL247W RPL17BP46990 184 aaKnown RBP10.98□□□□□ -0.65
BRR6YGL247W BFR2Q06631 534 aaKnown RBP10.94□□□□□ -0.66
BRR6YGL247W REB1P21538 810 aa10.93□□□□□ -0.66
BRR6YGL247W YGL015CP33199 130 aa10.6□□□□□ -0.71
BRR6YGL247W CDC27P38042 758 aa10.5□□□□□ -0.73
BRR6YGL247W SPT21P35209 758 aa10.49□□□□□ -0.73
BRR6YGL247W YKR023WP36119 530 aaKnown RBP10.42□□□□□ -0.74
BRR6YGL247W HOP09932 586 aa10.22□□□□□ -0.77
BRR6YGL247W DCD1P06773 312 aa10.2□□□□□ -0.78
BRR6YGL247W TFC8Q12308 588 aa10.19□□□□□ -0.78
BRR6YGL247W MAP2P38174 421 aaKnown RBP10.17□□□□□ -0.78
BRR6YGL247W UBP10P53874 792 aaPredicted RBP10.15□□□□□ -0.78
BRR6YGL247W RIM101P33400 625 aa10.07□□□□□ -0.8
BRR6YGL247W SCY1P53009 804 aa9.95□□□□□ -0.82
BRR6YGL247W BCH2P36122 765 aa9.87□□□□□ -0.83
BRR6YGL247W SLX5P32828 619 aaKnown RBP9.8□□□□□ -0.84
BRR6YGL247W BUD31P25337 157 aaPredicted RBP9.78□□□□□ -0.84
BRR6YGL247W OXP1P28273 1286 aa9.76□□□□□ -0.85
BRR6YGL247W TIF4632P39936 914 aaKnown RBP9.73□□□□□ -0.85
BRR6YGL247W TGL3P40308 642 aa9.69□□□□□ -0.86
BRR6YGL247W PTP3P40048 928 aa9.6□□□□□ -0.87
BRR6YGL247W EPS1P40557 701 aa9.6□□□□□ -0.87
BRR6YGL247W YIL055CP40523 627 aaKnown RBP9.59□□□□□ -0.87
BRR6YGL247W BDF1P35817 686 aa9.57□□□□□ -0.88
BRR6YGL247W TFA1P36100 482 aa9.47□□□□□ -0.89
BRR6YGL247W YAH1Q12184 172 aaKnown RBP9.47□□□□□ -0.89
BRR6YGL247W RSM7P47150 247 aa9.45□□□□□ -0.9
BRR6YGL247W UBP9P39967 754 aa9.42□□□□□ -0.9
BRR6YGL247W AI2P03876 854 aa9.38□□□□□ -0.91
BRR6YGL247W BBC1P47068 1157 aa9.37□□□□□ -0.91
BRR6YGL247W SIS1P25294 352 aaKnown RBP9.31□□□□□ -0.92
BRR6YGL247W YLR271WQ06152 274 aa9.29□□□□□ -0.92
BRR6YGL247W MST1P07236 462 aa9.27□□□□□ -0.93
BRR6YGL247W YOR238WQ08634 303 aa9.24□□□□□ -0.93
BRR6YGL247W NSR1P27476 414 aaKnown RBP RIP-Chip data9.2□□□□□ -0.94 RIP-Chip
BRR6YGL247W YBL029C-AQ3E756 94 aa9.19□□□□□ -0.94
BRR6YGL247W YAP5P40574 245 aa9.16□□□□□ -0.94
BRR6YGL247W PSD2P53037 1138 aaKnown RBP9.15□□□□□ -0.94
BRR6YGL247W SSP1P38871 571 aa9.11□□□□□ -0.95
BRR6YGL247W VNX1P42839 908 aa9.06□□□□□ -0.96
BRR6YGL247W MRM1P25270 412 aa9.05□□□□□ -0.96
BRR6YGL247W WSC3Q12215 556 aa9.04□□□□□ -0.96
BRR6YGL247W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
BRR6YGL247W PIB1Q06651 286 aa9□□□□□ -0.97
BRR6YGL247W SPP1Q03012 353 aa8.98□□□□□ -0.97
BRR6YGL247W GTT3P39996 337 aa8.97□□□□□ -0.97
BRR6YGL247W CST9Q06032 482 aa8.97□□□□□ -0.97
BRR6YGL247W MGA2P40578 1113 aa8.89□□□□□ -0.99
BRR6YGL247W TIF11P38912 153 aaKnown RBP8.88□□□□□ -0.99
BRR6YGL247W VPS29P38759 282 aa8.85□□□□□ -0.99
BRR6YGL247W RTG3P38165 486 aa8.82□□□□□ -1
BRR6YGL247W YMR1P47147 688 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
BRR6YGL247W DBP1P24784 617 aaKnown RBP8.8□□□□□ -1
BRR6YGL247W YFR006WP43590 535 aa8.8□□□□□ -1
BRR6YGL247W ULI1P43604 169 aa8.79□□□□□ -1
BRR6YGL247W AIR2Q12476 344 aaKnown RBP8.79□□□□□ -1
BRR6YGL247W RCR1P38212 213 aa8.78□□□□□ -1
BRR6YGL247W FKH1P40466 484 aa8.78□□□□□ -1
BRR6YGL247W STS1P38637 319 aa8.77□□□□□ -1.01
BRR6YGL247W LDB19Q12502 818 aa8.76□□□□□ -1.01
BRR6YGL247W IOC2Q12072 812 aa8.75□□□□□ -1.01
BRR6YGL247W SET4P42948 560 aa8.73□□□□□ -1.01
BRR6YGL247W YOL036WQ08206 761 aa8.73□□□□□ -1.01
BRR6YGL247W MSB4Q12317 492 aa8.72□□□□□ -1.01
BRR6YGL247W VMA1P17255 1071 aaKnown RBP8.7□□□□□ -1.02
BRR6YGL247W YJL171CP46992 396 aa8.69□□□□□ -1.02
BRR6YGL247W EAP1P36041 632 aaKnown RBP8.66□□□□□ -1.02
BRR6YGL247W TRP5P00931 707 aaKnown RBP8.64□□□□□ -1.03
BRR6YGL247W SAM3Q08986 587 aa8.63□□□□□ -1.03
BRR6YGL247W RTG1P32607 177 aa8.6□□□□□ -1.03
BRR6YGL247W BMT6Q12291 365 aa8.57□□□□□ -1.04
BRR6YGL247W YNL035CP53962 389 aaKnown RBP8.54□□□□□ -1.04
BRR6YGL247W NCR1Q12200 1170 aa8.53□□□□□ -1.04
BRR6YGL247W GYP5Q12344 894 aa8.52□□□□□ -1.05
BRR6YGL247W SEC61P32915 480 aa8.49□□□□□ -1.05
BRR6YGL247W DCW1P36091 449 aa8.47□□□□□ -1.05
BRR6YGL247W RAM2P29703 316 aa8.46□□□□□ -1.06
BRR6YGL247W ABP1P15891 592 aaKnown RBP8.45□□□□□ -1.06
BRR6YGL247W DAN4P47179 1161 aa8.45□□□□□ -1.06
BRR6YGL247W HTA1P04911 132 aaKnown RBP8.44□□□□□ -1.06
BRR6YGL247W HTA2P04912 132 aa8.44□□□□□ -1.06
BRR6YGL247W JIP4Q03361 876 aa8.42□□□□□ -1.06
BRR6YGL247W MAK11P20484 414 aaKnown RBP8.41□□□□□ -1.06
BRR6YGL247W MIF2P35201 549 aa8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms