RNA–Protein interactions for RNA: YGL059W

PKP2, Transcript of Mitochondrial protein kinase, yeastyeast

Gene PKP2, Length 1,476 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKP2YGL059W MTC1P47018 478 aaKnown RBP12.21□□□□□ -0.46
PKP2YGL059W FAP1P53971 965 aa11.38□□□□□ -0.59
PKP2YGL059W DRS1P32892 752 aaKnown RBP10.97□□□□□ -0.65
PKP2YGL059W PRY3P47033 881 aa10.71□□□□□ -0.69
PKP2YGL059W PRI1P10363 409 aa10.51□□□□□ -0.73
PKP2YGL059W AAD16Q02895 342 aa10.49□□□□□ -0.73
PKP2YGL059W ISW2Q08773 1120 aa10.22□□□□□ -0.77
PKP2YGL059W YCK3P39962 524 aa10.09□□□□□ -0.79
PKP2YGL059W HAA1Q12753 694 aaKnown RBP10.09□□□□□ -0.79
PKP2YGL059W RPG1P38249 964 aaKnown RBP10.08□□□□□ -0.8
PKP2YGL059W TSR3Q12094 313 aaKnown RBP9.86□□□□□ -0.83
PKP2YGL059W DIP2Q12220 943 aaPredicted RBP9.77□□□□□ -0.85
PKP2YGL059W RSE1Q04693 1361 aaKnown RBP9.57□□□□□ -0.88
PKP2YGL059W MRPL32P25348 183 aa9.53□□□□□ -0.88
PKP2YGL059W AVT3P36062 692 aa9.32□□□□□ -0.92
PKP2YGL059W REB1P21538 810 aa9.28□□□□□ -0.92
PKP2YGL059W YGL015CP33199 130 aa9.28□□□□□ -0.92
PKP2YGL059W RPL17AP05740 184 aaKnown RBP9.27□□□□□ -0.93
PKP2YGL059W RPL17BP46990 184 aaKnown RBP9.27□□□□□ -0.93
PKP2YGL059W CDC27P38042 758 aa8.95□□□□□ -0.98
PKP2YGL059W BFR2Q06631 534 aaKnown RBP8.93□□□□□ -0.98
PKP2YGL059W SPT21P35209 758 aa8.86□□□□□ -0.99
PKP2YGL059W YKR023WP36119 530 aaKnown RBP8.84□□□□□ -0.99
PKP2YGL059W UBP10P53874 792 aaPredicted RBP8.83□□□□□ -1
PKP2YGL059W MAP2P38174 421 aaKnown RBP8.71□□□□□ -1.01
PKP2YGL059W TFC8Q12308 588 aa8.68□□□□□ -1.02
PKP2YGL059W BUD31P25337 157 aaPredicted RBP8.67□□□□□ -1.02
PKP2YGL059W HOP09932 586 aa8.63□□□□□ -1.03
PKP2YGL059W DCD1P06773 312 aa8.58□□□□□ -1.04
PKP2YGL059W RIM101P33400 625 aa8.48□□□□□ -1.05
PKP2YGL059W SCY1P53009 804 aa8.47□□□□□ -1.05
PKP2YGL059W TIF4632P39936 914 aaKnown RBP8.45□□□□□ -1.06
PKP2YGL059W SLX5P32828 619 aaKnown RBP8.42□□□□□ -1.06
PKP2YGL059W TGL3P40308 642 aa8.42□□□□□ -1.06
PKP2YGL059W BCH2P36122 765 aa8.36□□□□□ -1.07
PKP2YGL059W TFA1P36100 482 aa8.35□□□□□ -1.07
PKP2YGL059W UBP9P39967 754 aa8.29□□□□□ -1.08
PKP2YGL059W SIS1P25294 352 aaKnown RBP8.19□□□□□ -1.1
PKP2YGL059W OXP1P28273 1286 aa8.14□□□□□ -1.11
PKP2YGL059W EPS1P40557 701 aa8.13□□□□□ -1.11
PKP2YGL059W BDF1P35817 686 aa8.11□□□□□ -1.11
PKP2YGL059W YIL055CP40523 627 aaKnown RBP8.05□□□□□ -1.12
PKP2YGL059W MST1P07236 462 aa8.04□□□□□ -1.12
PKP2YGL059W PTP3P40048 928 aa8.04□□□□□ -1.12
PKP2YGL059W NSR1P27476 414 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
PKP2YGL059W YOR238WQ08634 303 aa7.97□□□□□ -1.13
PKP2YGL059W BBC1P47068 1157 aa7.94□□□□□ -1.14
PKP2YGL059W RSM7P47150 247 aa7.94□□□□□ -1.14
PKP2YGL059W YBL029C-AQ3E756 94 aa7.9□□□□□ -1.14
PKP2YGL059W AI2P03876 854 aa7.88□□□□□ -1.15
PKP2YGL059W YAP5P40574 245 aa7.87□□□□□ -1.15
PKP2YGL059W VNX1P42839 908 aa7.84□□□□□ -1.15
PKP2YGL059W YAH1Q12184 172 aaKnown RBP7.82□□□□□ -1.16
PKP2YGL059W SPP1Q03012 353 aa7.75□□□□□ -1.17
PKP2YGL059W YLR271WQ06152 274 aa7.72□□□□□ -1.17
PKP2YGL059W WSC3Q12215 556 aa7.71□□□□□ -1.18
PKP2YGL059W TIF11P38912 153 aaKnown RBP7.68□□□□□ -1.18
PKP2YGL059W GTT3P39996 337 aa7.68□□□□□ -1.18
PKP2YGL059W PSD2P53037 1138 aaKnown RBP7.67□□□□□ -1.18
PKP2YGL059W AIR2Q12476 344 aaKnown RBP7.63□□□□□ -1.19
PKP2YGL059W FKH1P40466 484 aa7.62□□□□□ -1.19
PKP2YGL059W YJL171CP46992 396 aa7.59□□□□□ -1.19
PKP2YGL059W MRM1P25270 412 aa7.56□□□□□ -1.2
PKP2YGL059W ULI1P43604 169 aa7.55□□□□□ -1.2
PKP2YGL059W PIB1Q06651 286 aa7.55□□□□□ -1.2
PKP2YGL059W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
PKP2YGL059W LDB19Q12502 818 aa7.55□□□□□ -1.2
PKP2YGL059W SSP1P38871 571 aa7.54□□□□□ -1.2
PKP2YGL059W IOC2Q12072 812 aa7.54□□□□□ -1.2
PKP2YGL059W MSB4Q12317 492 aa7.54□□□□□ -1.2
PKP2YGL059W EAP1P36041 632 aaKnown RBP7.49□□□□□ -1.21
PKP2YGL059W BMT6Q12291 365 aa7.47□□□□□ -1.21
PKP2YGL059W YMR1P47147 688 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
PKP2YGL059W VPS29P38759 282 aa7.43□□□□□ -1.22
PKP2YGL059W YOL036WQ08206 761 aa7.43□□□□□ -1.22
PKP2YGL059W DBP1P24784 617 aaKnown RBP7.42□□□□□ -1.22
PKP2YGL059W RTG3P38165 486 aa7.42□□□□□ -1.22
PKP2YGL059W MGA2P40578 1113 aa7.41□□□□□ -1.22
PKP2YGL059W SET4P42948 560 aa7.41□□□□□ -1.22
PKP2YGL059W CST9Q06032 482 aa7.41□□□□□ -1.22
PKP2YGL059W TRP5P00931 707 aaKnown RBP7.39□□□□□ -1.23
PKP2YGL059W RTG1P32607 177 aa7.39□□□□□ -1.23
PKP2YGL059W RQC2Q12532 1038 aaKnown RBP7.38□□□□□ -1.23
PKP2YGL059W VMA1P17255 1071 aaKnown RBP7.36□□□□□ -1.23
PKP2YGL059W SAM3Q08986 587 aa7.36□□□□□ -1.23
PKP2YGL059W SEC61P32915 480 aa7.36□□□□□ -1.23
PKP2YGL059W YNL035CP53962 389 aaKnown RBP7.36□□□□□ -1.23
PKP2YGL059W NCR1Q12200 1170 aa7.36□□□□□ -1.23
PKP2YGL059W STS1P38637 319 aa7.35□□□□□ -1.23
PKP2YGL059W YFR006WP43590 535 aa7.35□□□□□ -1.23
PKP2YGL059W ABP1P15891 592 aaKnown RBP7.28□□□□□ -1.24
PKP2YGL059W RCR1P38212 213 aa7.25□□□□□ -1.25
PKP2YGL059W TFG1P41895 735 aaPredicted RBP7.25□□□□□ -1.25
PKP2YGL059W JIP4Q03361 876 aa7.25□□□□□ -1.25
PKP2YGL059W DAN4P47179 1161 aa7.23□□□□□ -1.25
PKP2YGL059W GYP5Q12344 894 aa7.22□□□□□ -1.25
PKP2YGL059W HTA1P04911 132 aaKnown RBP7.19□□□□□ -1.26
PKP2YGL059W HTA2P04912 132 aa7.19□□□□□ -1.26
PKP2YGL059W YDL129WQ07555 291 aa7.17□□□□□ -1.26
PKP2YGL059W SAP30P38429 201 aa7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms