RNA–Protein interactions for RNA: YGL029W

CGR1, Protein involved in nucleolar integrity and processing of pre-rRNA, yeastyeast

Gene CGR1, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CGR1YGL029W MTC1P47018 478 aaKnown RBP12.53□□□□□ -0.4
CGR1YGL029W FAP1P53971 965 aa12.44□□□□□ -0.42
CGR1YGL029W PRY3P47033 881 aa11.74□□□□□ -0.53
CGR1YGL029W AAD16Q02895 342 aa11.21□□□□□ -0.61
CGR1YGL029W PRI1P10363 409 aa11.16□□□□□ -0.62
CGR1YGL029W YCK3P39962 524 aa11.13□□□□□ -0.63
CGR1YGL029W HAA1Q12753 694 aaKnown RBP10.94□□□□□ -0.66
CGR1YGL029W DRS1P32892 752 aaKnown RBP10.65□□□□□ -0.7
CGR1YGL029W ISW2Q08773 1120 aa10.58□□□□□ -0.72
CGR1YGL029W RPG1P38249 964 aaKnown RBP10.54□□□□□ -0.72
CGR1YGL029W TSR3Q12094 313 aaKnown RBP10.5□□□□□ -0.73
CGR1YGL029W MRPL32P25348 183 aa10.06□□□□□ -0.8
CGR1YGL029W YGL015CP33199 130 aa9.94□□□□□ -0.82
CGR1YGL029W DIP2Q12220 943 aaPredicted RBP9.72□□□□□ -0.85
CGR1YGL029W RSE1Q04693 1361 aaKnown RBP9.68□□□□□ -0.86
CGR1YGL029W BUD31P25337 157 aaPredicted RBP9.58□□□□□ -0.88
CGR1YGL029W REB1P21538 810 aa9.48□□□□□ -0.89
CGR1YGL029W RPL17AP05740 184 aaKnown RBP9.45□□□□□ -0.9
CGR1YGL029W RPL17BP46990 184 aaKnown RBP9.45□□□□□ -0.9
CGR1YGL029W CDC27P38042 758 aa9.42□□□□□ -0.9
CGR1YGL029W UBP10P53874 792 aaPredicted RBP9.24□□□□□ -0.93
CGR1YGL029W MAP2P38174 421 aaKnown RBP9.23□□□□□ -0.93
CGR1YGL029W YKR023WP36119 530 aaKnown RBP9.14□□□□□ -0.95
CGR1YGL029W AVT3P36062 692 aa9.09□□□□□ -0.95
CGR1YGL029W SIS1P25294 352 aaKnown RBP9.01□□□□□ -0.97
CGR1YGL029W SPT21P35209 758 aa8.99□□□□□ -0.97
CGR1YGL029W DCD1P06773 312 aa8.95□□□□□ -0.98
CGR1YGL029W HOP09932 586 aa8.94□□□□□ -0.98
CGR1YGL029W TFC8Q12308 588 aa8.94□□□□□ -0.98
CGR1YGL029W UBP9P39967 754 aa8.87□□□□□ -0.99
CGR1YGL029W TIF4632P39936 914 aaKnown RBP8.85□□□□□ -0.99
CGR1YGL029W TGL3P40308 642 aa8.85□□□□□ -0.99
CGR1YGL029W SCY1P53009 804 aa8.85□□□□□ -0.99
CGR1YGL029W SLX5P32828 619 aaKnown RBP8.78□□□□□ -1
CGR1YGL029W BCH2P36122 765 aa8.61□□□□□ -1.03
CGR1YGL029W RIM101P33400 625 aa8.44□□□□□ -1.06
CGR1YGL029W YBL029C-AQ3E756 94 aa8.4□□□□□ -1.06
CGR1YGL029W MST1P07236 462 aa8.38□□□□□ -1.07
CGR1YGL029W BFR2Q06631 534 aaKnown RBP8.34□□□□□ -1.07
CGR1YGL029W BDF1P35817 686 aa8.31□□□□□ -1.08
CGR1YGL029W EPS1P40557 701 aa8.31□□□□□ -1.08
CGR1YGL029W VNX1P42839 908 aa8.27□□□□□ -1.09
CGR1YGL029W YOR238WQ08634 303 aa8.27□□□□□ -1.09
CGR1YGL029W SPP1Q03012 353 aa8.17□□□□□ -1.1
CGR1YGL029W NSR1P27476 414 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
CGR1YGL029W OXP1P28273 1286 aa8.14□□□□□ -1.11
CGR1YGL029W AIR2Q12476 344 aaKnown RBP8.14□□□□□ -1.11
CGR1YGL029W WSC3Q12215 556 aa8.11□□□□□ -1.11
CGR1YGL029W YJL171CP46992 396 aa8.07□□□□□ -1.12
CGR1YGL029W FKH1P40466 484 aa8.06□□□□□ -1.12
CGR1YGL029W YAP5P40574 245 aa8.06□□□□□ -1.12
CGR1YGL029W TIF11P38912 153 aaKnown RBP8.02□□□□□ -1.13
CGR1YGL029W PTP3P40048 928 aa8.01□□□□□ -1.13
CGR1YGL029W YIL055CP40523 627 aaKnown RBP7.97□□□□□ -1.13
CGR1YGL029W BBC1P47068 1157 aa7.94□□□□□ -1.14
CGR1YGL029W LDB19Q12502 818 aa7.92□□□□□ -1.14
CGR1YGL029W AI2P03876 854 aa7.9□□□□□ -1.14
CGR1YGL029W GTT3P39996 337 aa7.9□□□□□ -1.14
CGR1YGL029W BMT6Q12291 365 aa7.89□□□□□ -1.15
CGR1YGL029W RSM7P47150 247 aa7.88□□□□□ -1.15
CGR1YGL029W IOC2Q12072 812 aa7.88□□□□□ -1.15
CGR1YGL029W ULI1P43604 169 aa7.87□□□□□ -1.15
CGR1YGL029W PIB1Q06651 286 aa7.77□□□□□ -1.17
CGR1YGL029W TFA1P36100 482 aa7.73□□□□□ -1.17
CGR1YGL029W YAH1Q12184 172 aaKnown RBP7.73□□□□□ -1.17
CGR1YGL029W RTG1P32607 177 aa7.68□□□□□ -1.18
CGR1YGL029W MSB4Q12317 492 aa7.68□□□□□ -1.18
CGR1YGL029W EAP1P36041 632 aaKnown RBP7.66□□□□□ -1.18
CGR1YGL029W NCR1Q12200 1170 aa7.65□□□□□ -1.18
CGR1YGL029W TRP5P00931 707 aaKnown RBP7.63□□□□□ -1.19
CGR1YGL029W SET4P42948 560 aa7.61□□□□□ -1.19
CGR1YGL029W YOL036WQ08206 761 aa7.61□□□□□ -1.19
CGR1YGL029W YLR271WQ06152 274 aa7.58□□□□□ -1.2
CGR1YGL029W PSD2P53037 1138 aaKnown RBP7.57□□□□□ -1.2
CGR1YGL029W YNL035CP53962 389 aaKnown RBP7.57□□□□□ -1.2
CGR1YGL029W MRM1P25270 412 aa7.56□□□□□ -1.2
CGR1YGL029W SEC61P32915 480 aa7.56□□□□□ -1.2
CGR1YGL029W BCK2P33306 851 aa7.47□□□□□ -1.21
CGR1YGL029W DBP1P24784 617 aaKnown RBP7.45□□□□□ -1.22
CGR1YGL029W SAP30P38429 201 aa7.45□□□□□ -1.22
CGR1YGL029W YMR1P47147 688 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
CGR1YGL029W VMA1P17255 1071 aaKnown RBP7.43□□□□□ -1.22
CGR1YGL029W VPS29P38759 282 aa7.43□□□□□ -1.22
CGR1YGL029W TFG1P41895 735 aaPredicted RBP7.43□□□□□ -1.22
CGR1YGL029W YFR006WP43590 535 aa7.43□□□□□ -1.22
CGR1YGL029W SAM3Q08986 587 aa7.42□□□□□ -1.22
CGR1YGL029W DAN4P47179 1161 aa7.41□□□□□ -1.22
CGR1YGL029W CHL1P22516 861 aaPredicted RBP7.4□□□□□ -1.22
CGR1YGL029W STS1P38637 319 aa7.37□□□□□ -1.23
CGR1YGL029W YDL129WQ07555 291 aa7.36□□□□□ -1.23
CGR1YGL029W PRE3P38624 215 aa7.35□□□□□ -1.23
CGR1YGL029W JIP4Q03361 876 aa7.35□□□□□ -1.23
CGR1YGL029W RTG3P38165 486 aa7.31□□□□□ -1.24
CGR1YGL029W XDJ1P39102 459 aa7.26□□□□□ -1.25
CGR1YGL029W CST9Q06032 482 aa7.26□□□□□ -1.25
CGR1YGL029W GYP5Q12344 894 aa7.26□□□□□ -1.25
CGR1YGL029W ABP1P15891 592 aaKnown RBP7.25□□□□□ -1.25
CGR1YGL029W VRP1P37370 817 aa7.24□□□□□ -1.25
CGR1YGL029W PTC4P38089 393 aa7.24□□□□□ -1.25
CGR1YGL029W HTA1P04911 132 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms