RNA–Protein interactions for RNA: YFR054C

YFR054C, Transcript of Dubious open reading frame, yeastyeast

Gene YFR054C, Length 579 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFR054CYFR054C MTC1P47018 478 aaKnown RBP10.05□□□□□ -0.8
YFR054CYFR054C DRS1P32892 752 aaKnown RBP9.35□□□□□ -0.91
YFR054CYFR054C FAP1P53971 965 aa9.11□□□□□ -0.95
YFR054CYFR054C PRY3P47033 881 aa8.59□□□□□ -1.03
YFR054CYFR054C PRI1P10363 409 aa8.48□□□□□ -1.05
YFR054CYFR054C AAD16Q02895 342 aa8.46□□□□□ -1.06
YFR054CYFR054C ISW2Q08773 1120 aa8.38□□□□□ -1.07
YFR054CYFR054C RPG1P38249 964 aaKnown RBP8.24□□□□□ -1.09
YFR054CYFR054C DIP2Q12220 943 aaPredicted RBP8.2□□□□□ -1.1
YFR054CYFR054C YCK3P39962 524 aa8.13□□□□□ -1.11
YFR054CYFR054C HAA1Q12753 694 aaKnown RBP8.04□□□□□ -1.12
YFR054CYFR054C TSR3Q12094 313 aaKnown RBP8.01□□□□□ -1.13
YFR054CYFR054C RSE1Q04693 1361 aaKnown RBP7.97□□□□□ -1.13
YFR054CYFR054C BFR2Q06631 534 aaKnown RBP7.88□□□□□ -1.15
YFR054CYFR054C AVT3P36062 692 aa7.87□□□□□ -1.15
YFR054CYFR054C MRPL32P25348 183 aa7.74□□□□□ -1.17
YFR054CYFR054C RPL17AP05740 184 aaKnown RBP7.7□□□□□ -1.18
YFR054CYFR054C REB1P21538 810 aa7.7□□□□□ -1.18
YFR054CYFR054C RPL17BP46990 184 aaKnown RBP7.7□□□□□ -1.18
YFR054CYFR054C TFA1P36100 482 aa7.55□□□□□ -1.2
YFR054CYFR054C YGL015CP33199 130 aa7.42□□□□□ -1.22
YFR054CYFR054C SPT21P35209 758 aa7.34□□□□□ -1.23
YFR054CYFR054C CDC27P38042 758 aa7.29□□□□□ -1.24
YFR054CYFR054C YKR023WP36119 530 aaKnown RBP7.25□□□□□ -1.25
YFR054CYFR054C UBP10P53874 792 aaPredicted RBP7.15□□□□□ -1.26
YFR054CYFR054C TFC8Q12308 588 aa7.13□□□□□ -1.27
YFR054CYFR054C HOP09932 586 aa7.12□□□□□ -1.27
YFR054CYFR054C MAP2P38174 421 aaKnown RBP7.08□□□□□ -1.28
YFR054CYFR054C DCD1P06773 312 aa7.07□□□□□ -1.28
YFR054CYFR054C RIM101P33400 625 aa7.07□□□□□ -1.28
YFR054CYFR054C SCY1P53009 804 aa6.95□□□□□ -1.3
YFR054CYFR054C SLX5P32828 619 aaKnown RBP6.88□□□□□ -1.31
YFR054CYFR054C BCH2P36122 765 aa6.88□□□□□ -1.31
YFR054CYFR054C TIF4632P39936 914 aaKnown RBP6.88□□□□□ -1.31
YFR054CYFR054C BUD31P25337 157 aaPredicted RBP6.86□□□□□ -1.31
YFR054CYFR054C RQC2Q12532 1038 aaKnown RBP6.82□□□□□ -1.32
YFR054CYFR054C OXP1P28273 1286 aa6.81□□□□□ -1.32
YFR054CYFR054C TGL3P40308 642 aa6.81□□□□□ -1.32
YFR054CYFR054C PTP3P40048 928 aa6.78□□□□□ -1.32
YFR054CYFR054C YIL055CP40523 627 aaKnown RBP6.78□□□□□ -1.32
YFR054CYFR054C EPS1P40557 701 aa6.73□□□□□ -1.33
YFR054CYFR054C BDF1P35817 686 aa6.69□□□□□ -1.34
YFR054CYFR054C UBP9P39967 754 aa6.66□□□□□ -1.34
YFR054CYFR054C RSM7P47150 247 aa6.66□□□□□ -1.34
YFR054CYFR054C BBC1P47068 1157 aa6.65□□□□□ -1.34
YFR054CYFR054C YAH1Q12184 172 aaKnown RBP6.65□□□□□ -1.34
YFR054CYFR054C AI2P03876 854 aa6.6□□□□□ -1.35
YFR054CYFR054C NSR1P27476 414 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
YFR054CYFR054C SIS1P25294 352 aaKnown RBP6.51□□□□□ -1.37
YFR054CYFR054C YLR271WQ06152 274 aa6.51□□□□□ -1.37
YFR054CYFR054C YOR238WQ08634 303 aa6.51□□□□□ -1.37
YFR054CYFR054C MST1P07236 462 aa6.5□□□□□ -1.37
YFR054CYFR054C YAP5P40574 245 aa6.47□□□□□ -1.37
YFR054CYFR054C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
YFR054CYFR054C SSP1P38871 571 aa6.45□□□□□ -1.38
YFR054CYFR054C PSD2P53037 1138 aaKnown RBP6.43□□□□□ -1.38
YFR054CYFR054C YBL029C-AQ3E756 94 aa6.41□□□□□ -1.38
YFR054CYFR054C MRM1P25270 412 aa6.36□□□□□ -1.39
YFR054CYFR054C GTT3P39996 337 aa6.36□□□□□ -1.39
YFR054CYFR054C VNX1P42839 908 aa6.34□□□□□ -1.39
YFR054CYFR054C DMA1P38823 416 aa6.33□□□□□ -1.4
YFR054CYFR054C WSC3Q12215 556 aa6.32□□□□□ -1.4
YFR054CYFR054C MGA2P40578 1113 aa6.31□□□□□ -1.4
YFR054CYFR054C SPP1Q03012 353 aa6.31□□□□□ -1.4
YFR054CYFR054C CST9Q06032 482 aa6.28□□□□□ -1.4
YFR054CYFR054C PIB1Q06651 286 aa6.26□□□□□ -1.41
YFR054CYFR054C TIF11P38912 153 aaKnown RBP6.25□□□□□ -1.41
YFR054CYFR054C RTG3P38165 486 aa6.24□□□□□ -1.41
YFR054CYFR054C YMR1P47147 688 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
YFR054CYFR054C DBP1P24784 617 aaKnown RBP6.19□□□□□ -1.42
YFR054CYFR054C VPS29P38759 282 aa6.19□□□□□ -1.42
YFR054CYFR054C MSB4Q12317 492 aa6.19□□□□□ -1.42
YFR054CYFR054C ULI1P43604 169 aa6.17□□□□□ -1.42
YFR054CYFR054C EAP1P36041 632 aaKnown RBP6.16□□□□□ -1.42
YFR054CYFR054C FKH1P40466 484 aa6.16□□□□□ -1.42
YFR054CYFR054C YFR006WP43590 535 aa6.15□□□□□ -1.42
YFR054CYFR054C STS1P38637 319 aa6.14□□□□□ -1.43
YFR054CYFR054C YOL036WQ08206 761 aa6.14□□□□□ -1.43
YFR054CYFR054C AIR2Q12476 344 aaKnown RBP6.14□□□□□ -1.43
YFR054CYFR054C LDB19Q12502 818 aa6.14□□□□□ -1.43
YFR054CYFR054C VMA1P17255 1071 aaKnown RBP6.13□□□□□ -1.43
YFR054CYFR054C YJL171CP46992 396 aa6.13□□□□□ -1.43
YFR054CYFR054C RCR1P38212 213 aa6.12□□□□□ -1.43
YFR054CYFR054C SET4P42948 560 aa6.12□□□□□ -1.43
YFR054CYFR054C IOC2Q12072 812 aa6.12□□□□□ -1.43
YFR054CYFR054C SAM3Q08986 587 aa6.09□□□□□ -1.43
YFR054CYFR054C TRP5P00931 707 aaKnown RBP6.06□□□□□ -1.44
YFR054CYFR054C ABP1P15891 592 aaKnown RBP6.05□□□□□ -1.44
YFR054CYFR054C BMT6Q12291 365 aa6.05□□□□□ -1.44
YFR054CYFR054C RTG1P32607 177 aa6.04□□□□□ -1.44
YFR054CYFR054C YNL035CP53962 389 aaKnown RBP6.03□□□□□ -1.44
YFR054CYFR054C GYP5Q12344 894 aa6.01□□□□□ -1.45
YFR054CYFR054C SEC61P32915 480 aa6□□□□□ -1.45
YFR054CYFR054C NCR1Q12200 1170 aa6□□□□□ -1.45
YFR054CYFR054C HTA1P04911 132 aaKnown RBP5.98□□□□□ -1.45
YFR054CYFR054C HTA2P04912 132 aa5.98□□□□□ -1.45
YFR054CYFR054C TFG1P41895 735 aaPredicted RBP5.98□□□□□ -1.45
YFR054CYFR054C MAK11P20484 414 aaKnown RBP5.97□□□□□ -1.45
YFR054CYFR054C JIP4Q03361 876 aa5.97□□□□□ -1.45
YFR054CYFR054C DCW1P36091 449 aa5.95□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms